RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 UTRNP46939 3433 aa12.61□□□□□ -0.39
IFT43-201ENST00000238628 SBNO1A3KN83 1393 aa12.61□□□□□ -0.39
IFT43-201ENST00000238628 WAPLQ7Z5K2 1190 aa12.61□□□□□ -0.39
IFT43-201ENST00000238628 CLTCL1P53675 1640 aa12.61□□□□□ -0.39
IFT43-201ENST00000238628 KIF1AQ12756 1690 aa12.61□□□□□ -0.39
IFT43-201ENST00000238628 MYOM1P52179 1685 aa12.6□□□□□ -0.39
IFT43-201ENST00000238628 SPATA31A1Q5TZJ5 1347 aa12.6□□□□□ -0.39
IFT43-201ENST00000238628 ANO8Q9HCE9 1232 aaPredicted RBP12.59□□□□□ -0.39
IFT43-201ENST00000238628 STK26Q9P289 416 aa12.59□□□□□ -0.39
IFT43-201ENST00000238628 USP35Q9P2H5 1018 aa12.59□□□□□ -0.39
IFT43-201ENST00000238628 ABCA3Q99758 1704 aa12.59□□□□□ -0.39
IFT43-201ENST00000238628 CAPN15O75808 1086 aa12.58□□□□□ -0.4
IFT43-201ENST00000238628 HSPA6P17066 643 aa12.58□□□□□ -0.4
IFT43-201ENST00000238628 BCL11BQ9C0K0 894 aaPredicted RBP12.58□□□□□ -0.4
IFT43-201ENST00000238628 STRN4Q9NRL3 753 aa12.58□□□□□ -0.4
IFT43-201ENST00000238628 RRBP1Q9P2E9 1410 aaKnown RBP12.58□□□□□ -0.4
IFT43-201ENST00000238628 COL14A1Q05707 1796 aaKnown RBP12.58□□□□□ -0.4
IFT43-201ENST00000238628 RPGRIP1LQ68CZ1 1315 aa12.58□□□□□ -0.4
IFT43-201ENST00000238628 PRDM11Q9NQV5 511 aa12.57□□□□□ -0.4
IFT43-201ENST00000238628 DLC1Q96QB1 1528 aa12.56□□□□□ -0.4
IFT43-201ENST00000238628 CASZ1Q86V15 1759 aa12.56□□□□□ -0.4
IFT43-201ENST00000238628 PLSCR1O15162 318 aa12.55□□□□□ -0.4
IFT43-201ENST00000238628 PELP1Q8IZL8 1130 aaKnown RBP12.55□□□□□ -0.4
IFT43-201ENST00000238628 ARXQ96QS3 562 aa12.55□□□□□ -0.4
IFT43-201ENST00000238628 MTFR1LQ9H019 292 aa12.54□□□□□ -0.4
IFT43-201ENST00000238628 BARGINQ6ZT62 677 aa12.53□□□□□ -0.4
IFT43-201ENST00000238628 PMFBP1Q8TBY8 1022 aa12.53□□□□□ -0.4
IFT43-201ENST00000238628 STK32BQ9NY57 414 aa12.53□□□□□ -0.4
IFT43-201ENST00000238628 FMN2Q9NZ56 1722 aa12.53□□□□□ -0.4
IFT43-201ENST00000238628 PLEKHH1Q9ULM0 1364 aa12.53□□□□□ -0.4
IFT43-201ENST00000238628 PPLO60437 1756 aa12.53□□□□□ -0.4
IFT43-201ENST00000238628 C11orf95C9JLR9 678 aaPredicted RBP12.52□□□□□ -0.41
IFT43-201ENST00000238628 EVA1CP58658 441 aa12.52□□□□□ -0.41
IFT43-201ENST00000238628 SLC4A1APQ9BWU0 796 aaKnown RBP12.52□□□□□ -0.41
IFT43-201ENST00000238628 CHRNA2Q15822 529 aa12.51□□□□□ -0.41
IFT43-201ENST00000238628 SGIP1Q9BQI5 828 aa12.51□□□□□ -0.41
IFT43-201ENST00000238628 TECPR2O15040 1411 aa12.51□□□□□ -0.41
IFT43-201ENST00000238628 NRXN1Q9ULB1 1477 aa12.51□□□□□ -0.41
IFT43-201ENST00000238628 KLHL34Q8N239 644 aa12.5□□□□□ -0.41
IFT43-201ENST00000238628 SHANK3Q9BYB0 1731 aa12.5□□□□□ -0.41
IFT43-201ENST00000238628 RGPD8O14715 1765 aaPredicted RBP12.5□□□□□ -0.41
IFT43-201ENST00000238628 SLC15A2Q16348 729 aa12.49□□□□□ -0.41
IFT43-201ENST00000238628 GPBP1L1Q9HC44 474 aaPredicted RBP12.49□□□□□ -0.41
IFT43-201ENST00000238628 MAP3K5Q99683 1374 aa12.48□□□□□ -0.41
IFT43-201ENST00000238628 ADGRF5Q8IZF2 1346 aa12.48□□□□□ -0.41
IFT43-201ENST00000238628 RGL3Q3MIN7 710 aa12.48□□□□□ -0.41
IFT43-201ENST00000238628 PROM2Q8N271 834 aa12.48□□□□□ -0.41
IFT43-201ENST00000238628 TCP11L2Q8N4U5 519 aa12.48□□□□□ -0.41
IFT43-201ENST00000238628 GPRASP1Q5JY77 1395 aa12.47□□□□□ -0.41
IFT43-201ENST00000238628 KIAA0232Q92628 1395 aa12.47□□□□□ -0.41
IFT43-201ENST00000238628 ABCC11Q96J66 1382 aa12.47□□□□□ -0.41
IFT43-201ENST00000238628 PAK3O75914 559 aaPredicted RBP12.47□□□□□ -0.41
IFT43-201ENST00000238628 TMEM132EQ6IEE7 984 aa12.47□□□□□ -0.41
IFT43-201ENST00000238628 SLC34A2O95436 690 aa12.46□□□□□ -0.41
IFT43-201ENST00000238628 PRELPP51888 382 aa12.46□□□□□ -0.41
IFT43-201ENST00000238628 ZC3H6P61129 1189 aaKnown RBP12.46□□□□□ -0.41
IFT43-201ENST00000238628 COL13A1Q5TAT6 717 aaPredicted RBP12.46□□□□□ -0.41
IFT43-201ENST00000238628 ATP10DQ9P241 1426 aa12.45□□□□□ -0.42
IFT43-201ENST00000238628 LARP1Q6PKG0 1096 aaKnown RBP12.45□□□□□ -0.42
IFT43-201ENST00000238628 RGPD3A6NKT7 1758 aaPredicted RBP12.44□□□□□ -0.42
IFT43-201ENST00000238628 RGPD4Q7Z3J3 1758 aa12.44□□□□□ -0.42
IFT43-201ENST00000238628 GRIN3BO60391 1043 aa12.44□□□□□ -0.42
IFT43-201ENST00000238628 TXNRD1Q16881 649 aa12.44□□□□□ -0.42
IFT43-201ENST00000238628 PTF1AQ7RTS3 328 aa12.44□□□□□ -0.42
IFT43-201ENST00000238628 TNS4Q8IZW8 715 aa12.44□□□□□ -0.42
IFT43-201ENST00000238628 ZNF526Q8TF50 670 aaPredicted RBP12.44□□□□□ -0.42
IFT43-201ENST00000238628 THRAP3Q9Y2W1 955 aaKnown RBP12.44□□□□□ -0.42
IFT43-201ENST00000238628 OVOS2A0A0G2JMS6 1433 aa12.44□□□□□ -0.42
IFT43-201ENST00000238628 OVOS2A0A0J9YW53 1432 aa12.44□□□□□ -0.42
IFT43-201ENST00000238628 OVOS2Q6IE36 1432 aa12.44□□□□□ -0.42
IFT43-201ENST00000238628 SSH2Q76I76 1423 aa12.44□□□□□ -0.42
IFT43-201ENST00000238628 ANKRD30BQ9BXX2 1392 aa12.43□□□□□ -0.42
IFT43-201ENST00000238628 IFT172Q9UG01 1749 aa12.42□□□□□ -0.42
IFT43-201ENST00000238628 APLP1P51693 650 aa12.42□□□□□ -0.42
IFT43-201ENST00000238628 SAFB2Q14151 953 aaKnown RBP eCLIP12.42□□□□□ -0.42
IFT43-201ENST00000238628 ALS2Q96Q42 1657 aa12.42□□□□□ -0.42
IFT43-201ENST00000238628 ACIN1Q9UKV3 1341 aaKnown RBP12.41□□□□□ -0.42
IFT43-201ENST00000238628 SIRT1Q96EB6 747 aa12.41□□□□□ -0.42
IFT43-201ENST00000238628 TRPM3Q9HCF6 1732 aaPredicted RBP12.41□□□□□ -0.42
IFT43-201ENST00000238628 KNDC1Q76NI1 1749 aa12.4□□□□□ -0.42
IFT43-201ENST00000238628 NGDNQ8NEJ9 315 aaKnown RBP12.4□□□□□ -0.42
IFT43-201ENST00000238628 SPATA31E1Q6ZUB1 1445 aa12.39□□□□□ -0.43
IFT43-201ENST00000238628 YTHDC2Q9H6S0 1430 aaKnown RBP12.39□□□□□ -0.43
IFT43-201ENST00000238628 POLD1P28340 1107 aa12.39□□□□□ -0.43
IFT43-201ENST00000238628 DDB1Q16531 1140 aa12.39□□□□□ -0.43
IFT43-201ENST00000238628 DNAJC5GQ8N7S2 189 aa12.39□□□□□ -0.43
IFT43-201ENST00000238628 MPHOSPH9Q99550 1183 aa12.39□□□□□ -0.43
IFT43-201ENST00000238628 ANKARQ7Z5J8 1434 aa12.38□□□□□ -0.43
IFT43-201ENST00000238628 YBX3P16989 372 aaKnown RBP eCLIP12.38□□□□□ -0.43
IFT43-201ENST00000238628 NLGN2Q8NFZ4 835 aa12.38□□□□□ -0.43
IFT43-201ENST00000238628 C14orf93Q9H972 538 aaKnown RBP12.38□□□□□ -0.43
IFT43-201ENST00000238628 SBF2Q86WG5 1849 aa12.38□□□□□ -0.43
IFT43-201ENST00000238628 DHX57Q6P158 1386 aaKnown RBP12.38□□□□□ -0.43
IFT43-201ENST00000238628 NUTM2GQ5VZR2 741 aa12.37□□□□□ -0.43
IFT43-201ENST00000238628 CRYBG1Q9Y4K1 1723 aa12.37□□□□□ -0.43
IFT43-201ENST00000238628 PIK3C2GO75747 1445 aa12.37□□□□□ -0.43
IFT43-201ENST00000238628 CFAP70Q5T0N1 1121 aa12.36□□□□□ -0.43
IFT43-201ENST00000238628 PRAM1Q96QH2 718 aa12.36□□□□□ -0.43
IFT43-201ENST00000238628 POGKQ9P215 609 aa12.36□□□□□ -0.43
IFT43-201ENST00000238628 PEAK1Q9H792 1746 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms