RNA–Protein interactions for RNA: ENST00000237596.6

PKD2-201, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD2, Length 5,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-201ENST00000237596 SAMD1Q6SPF0 538 aaPredicted RBP22.71■■□□□ 1.23
PKD2-201ENST00000237596 ARID3AQ99856 593 aa22.71■■□□□ 1.23
PKD2-201ENST00000237596 PNISRQ8TF01 805 aaKnown RBP22.7■■□□□ 1.23
PKD2-201ENST00000237596 ATAD2Q6PL18 1390 aa22.7■■□□□ 1.22
PKD2-201ENST00000237596 NINLQ9Y2I6 1382 aa22.7■■□□□ 1.22
PKD2-201ENST00000237596 NUCB2P80303 420 aa22.69■■□□□ 1.22
PKD2-201ENST00000237596 DNMBPQ6XZF7 1577 aa22.69■■□□□ 1.22
PKD2-201ENST00000237596 SPG7Q9UQ90 795 aa22.69■■□□□ 1.22
PKD2-201ENST00000237596 A0A0U1RQG5 324 aaPredicted RBP22.69■■□□□ 1.22
PKD2-201ENST00000237596 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.69■■□□□ 1.22
PKD2-201ENST00000237596 HOOK1Q9UJC3 728 aaKnown RBP22.68■■□□□ 1.22
PKD2-201ENST00000237596 CCDC61Q9Y6R9 512 aa22.68■■□□□ 1.22
PKD2-201ENST00000237596 GNAI2P04899 355 aa22.68■■□□□ 1.22
PKD2-201ENST00000237596 ANKRD20A12PQ8NF67 263 aa22.68■■□□□ 1.22
PKD2-201ENST00000237596 PRM3Q9NNZ6 103 aa22.67■■□□□ 1.22
PKD2-201ENST00000237596 FOSBP53539 338 aa22.66■■□□□ 1.22
PKD2-201ENST00000237596 PDE3AQ14432 1141 aa22.66■■□□□ 1.22
PKD2-201ENST00000237596 WWC1Q8IX03 1113 aa22.66■■□□□ 1.22
PKD2-201ENST00000237596 DNAJC2Q99543 621 aaKnown RBP22.66■■□□□ 1.22
PKD2-201ENST00000237596 CCDC43Q96MW1 224 aaKnown RBP22.66■■□□□ 1.22
PKD2-201ENST00000237596 PSMA5P28066 241 aa22.65■■□□□ 1.22
PKD2-201ENST00000237596 RRS1Q15050 365 aaKnown RBP22.65■■□□□ 1.22
PKD2-201ENST00000237596 ERC1Q8IUD2 1116 aa22.65■■□□□ 1.22
PKD2-201ENST00000237596 GOLGA6L1Q8N7Z2 621 aa22.65■■□□□ 1.22
PKD2-201ENST00000237596 IPO7O95373 1038 aaKnown RBP22.64■■□□□ 1.22
PKD2-201ENST00000237596 PCMTD1Q96MG8 357 aaPredicted RBP22.64■■□□□ 1.22
PKD2-201ENST00000237596 NOB1Q9ULX3 412 aaKnown RBP22.64■■□□□ 1.22
PKD2-201ENST00000237596 XPCQ01831 940 aaPredicted RBP22.64■■□□□ 1.22
PKD2-201ENST00000237596 C1orf115Q9H7X2 142 aa22.64■■□□□ 1.22
PKD2-201ENST00000237596 CCDC73Q6ZRK6 1079 aa22.64■■□□□ 1.21
PKD2-201ENST00000237596 CNNM1Q9NRU3 951 aa22.64■■□□□ 1.21
PKD2-201ENST00000237596 EPRSP07814 1512 aaKnown RBP22.63■■□□□ 1.21
PKD2-201ENST00000237596 SRCIN1Q9C0H9 1055 aa22.63■■□□□ 1.21
PKD2-201ENST00000237596 CWC22Q9HCG8 908 aaKnown RBP22.63■■□□□ 1.21
PKD2-201ENST00000237596 TIAM1Q13009 1591 aa22.63■■□□□ 1.21
PKD2-201ENST00000237596 NUDT16Q96DE0 195 aaKnown RBP22.63■■□□□ 1.21
PKD2-201ENST00000237596 SART3Q15020 963 aaKnown RBP22.62■■□□□ 1.21
PKD2-201ENST00000237596 CCT4P50991 539 aaKnown RBP22.62■■□□□ 1.21
PKD2-201ENST00000237596 WDR63Q8IWG1 891 aa22.62■■□□□ 1.21
PKD2-201ENST00000237596 CDK13Q14004 1512 aaKnown RBP22.62■■□□□ 1.21
PKD2-201ENST00000237596 MTMR7Q9Y216 660 aa22.62■■□□□ 1.21
PKD2-201ENST00000237596 ZC3H6P61129 1189 aaKnown RBP22.61■■□□□ 1.21
PKD2-201ENST00000237596 GCC1Q96CN9 775 aa22.61■■□□□ 1.21
PKD2-201ENST00000237596 CD109Q6YHK3 1445 aa22.61■■□□□ 1.21
PKD2-201ENST00000237596 BCAR3O75815 825 aa22.6■■□□□ 1.21
PKD2-201ENST00000237596 XBP1P17861 261 aa22.6■■□□□ 1.21
PKD2-201ENST00000237596 PDZRN3Q9UPQ7 1066 aa22.6■■□□□ 1.21
PKD2-201ENST00000237596 HIP1O00291 1037 aa22.6■■□□□ 1.21
PKD2-201ENST00000237596 CT47B1P0C2W7 299 aaPredicted RBP22.6■■□□□ 1.21
PKD2-201ENST00000237596 CCAR2Q8N163 923 aaKnown RBP22.59■■□□□ 1.21
PKD2-201ENST00000237596 BRMS1Q9HCU9 246 aa22.59■■□□□ 1.21
PKD2-201ENST00000237596 CCDC158Q5M9N0 1113 aa22.59■■□□□ 1.21
PKD2-201ENST00000237596 ARHGEF11O15085 1522 aa22.59■■□□□ 1.21
PKD2-201ENST00000237596 ANO8Q9HCE9 1232 aaPredicted RBP22.59■■□□□ 1.21
PKD2-201ENST00000237596 FCHSD2O94868 740 aa22.58■■□□□ 1.21
PKD2-201ENST00000237596 MYL6BP14649 208 aa22.58■■□□□ 1.21
PKD2-201ENST00000237596 IKQ13123 557 aaPredicted RBP22.58■■□□□ 1.21
PKD2-201ENST00000237596 SF3B2Q13435 895 aaKnown RBP22.58■■□□□ 1.2
PKD2-201ENST00000237596 GNL3LQ9NVN8 582 aaKnown RBP22.58■■□□□ 1.2
PKD2-201ENST00000237596 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.58■■□□□ 1.2
PKD2-201ENST00000237596 SASS6Q6UVJ0 657 aa22.58■■□□□ 1.2
PKD2-201ENST00000237596 ABCA10Q8WWZ4 1543 aa22.57■■□□□ 1.2
PKD2-201ENST00000237596 MAGI1Q96QZ7 1491 aaPredicted RBP22.57■■□□□ 1.2
PKD2-201ENST00000237596 PIP4K2BP78356 416 aa22.57■■□□□ 1.2
PKD2-201ENST00000237596 CCDC141Q6ZP82 1450 aa22.57■■□□□ 1.2
PKD2-201ENST00000237596 ATF7IPQ6VMQ6 1270 aa22.57■■□□□ 1.2
PKD2-201ENST00000237596 NEK4P51957 841 aa22.56■■□□□ 1.2
PKD2-201ENST00000237596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.56■■□□□ 1.2
PKD2-201ENST00000237596 WAPLQ7Z5K2 1190 aa22.56■■□□□ 1.2
PKD2-201ENST00000237596 KCNH5Q8NCM2 988 aa22.55■■□□□ 1.2
PKD2-201ENST00000237596 SUPT6HQ7KZ85 1726 aaKnown RBP22.55■■□□□ 1.2
PKD2-201ENST00000237596 RSPH6AQ9H0K4 717 aa22.55■■□□□ 1.2
PKD2-201ENST00000237596 SIL1Q9H173 461 aa22.55■■□□□ 1.2
PKD2-201ENST00000237596 DNAJC5BQ9UF47 199 aa22.55■■□□□ 1.2
PKD2-201ENST00000237596 TTC39AQ5SRH9 613 aa22.54■■□□□ 1.2
PKD2-201ENST00000237596 ZNF428Q96B54 188 aa22.54■■□□□ 1.2
PKD2-201ENST00000237596 NAIPQ13075 1403 aa22.54■■□□□ 1.2
PKD2-201ENST00000237596 SLC3A2P08195 630 aaKnown RBP22.54■■□□□ 1.2
PKD2-201ENST00000237596 BTBD11A6QL63 1104 aa22.53■■□□□ 1.2
PKD2-201ENST00000237596 MPHOSPH8Q99549 860 aa22.53■■□□□ 1.2
PKD2-201ENST00000237596 PPP1R1BQ9UD71 204 aaPredicted RBP22.53■■□□□ 1.2
PKD2-201ENST00000237596 IQGAP2Q13576 1575 aa22.53■■□□□ 1.2
PKD2-201ENST00000237596 RRP12Q5JTH9 1297 aaKnown RBP22.53■■□□□ 1.2
PKD2-201ENST00000237596 CCDC57Q2TAC2 916 aa22.53■■□□□ 1.2
PKD2-201ENST00000237596 LRRCC1Q9C099 1032 aa22.53■■□□□ 1.2
PKD2-201ENST00000237596 SDF4Q9BRK5 362 aa22.52■■□□□ 1.2
PKD2-201ENST00000237596 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.52■■□□□ 1.2
PKD2-201ENST00000237596 NSD3Q9BZ95 1437 aa22.51■■□□□ 1.19
PKD2-201ENST00000237596 PLB1Q6P1J6 1458 aa22.51■■□□□ 1.19
PKD2-201ENST00000237596 NFE2L2Q16236 605 aa22.51■■□□□ 1.19
PKD2-201ENST00000237596 ATP2B1P20020 1258 aa22.5■■□□□ 1.19
PKD2-201ENST00000237596 KDM4AO75164 1064 aa22.5■■□□□ 1.19
PKD2-201ENST00000237596 PDCP20941 246 aa22.5■■□□□ 1.19
PKD2-201ENST00000237596 MCM2P49736 904 aa22.5■■□□□ 1.19
PKD2-201ENST00000237596 NFKBIBQ15653 356 aa22.5■■□□□ 1.19
PKD2-201ENST00000237596 CCDC70Q6NSX1 233 aa22.5■■□□□ 1.19
PKD2-201ENST00000237596 HSP90AA2PQ14568 343 aaPredicted RBP22.49■■□□□ 1.19
PKD2-201ENST00000237596 IL27Q8NEV9 243 aa22.49■■□□□ 1.19
PKD2-201ENST00000237596 SRGAP3O43295 1099 aa22.49■■□□□ 1.19
PKD2-201ENST00000237596 ZNF592Q92610 1267 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms