RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 SSH2Q76I76 1423 aa8.12□□□□□ -1.11
SGIP1-201ENST00000237247 FAM161AQ3B820 660 aa8.12□□□□□ -1.11
SGIP1-201ENST00000237247 DUSP27Q5VZP5 1158 aa8.12□□□□□ -1.11
SGIP1-201ENST00000237247 PLEKHH1Q9ULM0 1364 aa8.12□□□□□ -1.11
SGIP1-201ENST00000237247 SHANK3Q9BYB0 1731 aa8.11□□□□□ -1.11
SGIP1-201ENST00000237247 VGFO15240 615 aaPredicted RBP8.11□□□□□ -1.11
SGIP1-201ENST00000237247 NCLP19338 710 aaKnown RBP8.11□□□□□ -1.11
SGIP1-201ENST00000237247 PAXIP1Q6ZW49 1069 aaPredicted RBP8.11□□□□□ -1.11
SGIP1-201ENST00000237247 HOMEZQ8IX15 550 aa8.11□□□□□ -1.11
SGIP1-201ENST00000237247 POLR3GLQ9BT43 218 aa8.11□□□□□ -1.11
SGIP1-201ENST00000237247 DLG5Q8TDM6 1919 aa8.1□□□□□ -1.11
SGIP1-201ENST00000237247 AMER1Q5JTC6 1135 aaPredicted RBP8.1□□□□□ -1.11
SGIP1-201ENST00000237247 CDCA7LQ96GN5 454 aa8.1□□□□□ -1.11
SGIP1-201ENST00000237247 PANK3Q9H999 370 aa8.1□□□□□ -1.11
SGIP1-201ENST00000237247 C8orf34Q49A92 452 aa8.1□□□□□ -1.11
SGIP1-201ENST00000237247 CANXP27824 592 aaKnown RBP8.1□□□□□ -1.11
SGIP1-201ENST00000237247 PPP2R1AP30153 589 aa8.1□□□□□ -1.11
SGIP1-201ENST00000237247 SMAP1Q8IYB5 467 aaPredicted RBP8.1□□□□□ -1.11
SGIP1-201ENST00000237247 TPM2P07951 284 aa8.09□□□□□ -1.11
SGIP1-201ENST00000237247 RGS3P49796 1198 aa8.09□□□□□ -1.11
SGIP1-201ENST00000237247 NBPF1Q3BBV0 1214 aa8.09□□□□□ -1.11
SGIP1-201ENST00000237247 PTCH1Q13635 1447 aa8.09□□□□□ -1.11
SGIP1-201ENST00000237247 SLFN5Q08AF3 891 aa8.09□□□□□ -1.11
SGIP1-201ENST00000237247 LMTK3Q96Q04 1460 aa8.09□□□□□ -1.11
SGIP1-201ENST00000237247 PTPRUQ92729 1446 aa8.09□□□□□ -1.11
SGIP1-201ENST00000237247 TEX2Q8IWB9 1127 aa8.09□□□□□ -1.11
SGIP1-201ENST00000237247 PNNQ9H307 717 aaKnown RBP8.09□□□□□ -1.11
SGIP1-201ENST00000237247 KDM2AQ9Y2K7 1162 aa8.09□□□□□ -1.11
SGIP1-201ENST00000237247 GOLGA2Q08379 1002 aa8.08□□□□□ -1.12
SGIP1-201ENST00000237247 UTP14CQ5TAP6 766 aaKnown RBP8.08□□□□□ -1.12
SGIP1-201ENST00000237247 KANK1Q14678 1352 aa8.08□□□□□ -1.12
SGIP1-201ENST00000237247 NFKBIBQ15653 356 aa8.08□□□□□ -1.12
SGIP1-201ENST00000237247 CHMP4BQ9H444 224 aaKnown RBP8.08□□□□□ -1.12
SGIP1-201ENST00000237247 FAM135BQ49AJ0 1406 aa8.08□□□□□ -1.12
SGIP1-201ENST00000237247 POLR3AO14802 1390 aaPredicted RBP8.08□□□□□ -1.12
SGIP1-201ENST00000237247 GLI3P10071 1580 aa8.07□□□□□ -1.12
SGIP1-201ENST00000237247 CNGB1Q14028 1251 aaPredicted RBP8.07□□□□□ -1.12
SGIP1-201ENST00000237247 MAPK8IP3Q9UPT6 1336 aa8.07□□□□□ -1.12
SGIP1-201ENST00000237247 PDE3AQ14432 1141 aa8.06□□□□□ -1.12
SGIP1-201ENST00000237247 CGNL1Q0VF96 1302 aa8.06□□□□□ -1.12
SGIP1-201ENST00000237247 CPSF1Q10570 1443 aaKnown RBP8.06□□□□□ -1.12
SGIP1-201ENST00000237247 ABCC6O95255 1503 aa8.06□□□□□ -1.12
SGIP1-201ENST00000237247 FTSJ3Q8IY81 847 aaKnown RBP8.06□□□□□ -1.12
SGIP1-201ENST00000237247 ADAMTS8Q9UP79 889 aa8.06□□□□□ -1.12
SGIP1-201ENST00000237247 TUBGCP6Q96RT7 1819 aa8.06□□□□□ -1.12
SGIP1-201ENST00000237247 LAS1LQ9Y4W2 734 aaKnown RBP8.06□□□□□ -1.12
SGIP1-201ENST00000237247 ATP7BP35670 1465 aa8.06□□□□□ -1.12
SGIP1-201ENST00000237247 NHSL1Q5SYE7 1610 aa8.06□□□□□ -1.12
SGIP1-201ENST00000237247 RPGRIP1LQ68CZ1 1315 aa8.06□□□□□ -1.12
SGIP1-201ENST00000237247 MED1Q15648 1581 aaPredicted RBP8.05□□□□□ -1.12
SGIP1-201ENST00000237247 E9PSI1 815 aa8.05□□□□□ -1.12
SGIP1-201ENST00000237247 WDR43Q15061 677 aaKnown RBP eCLIP8.05□□□□□ -1.12
SGIP1-201ENST00000237247 MAP7D2Q96T17 732 aa8.05□□□□□ -1.12
SGIP1-201ENST00000237247 CHMP4AQ9BY43 222 aa8.05□□□□□ -1.12
SGIP1-201ENST00000237247 FAM208AQ9UK61 1670 aaKnown RBP8.05□□□□□ -1.12
SGIP1-201ENST00000237247 NPM2Q86SE8 214 aaKnown RBP8.05□□□□□ -1.12
SGIP1-201ENST00000237247 MAP2P11137 1827 aaKnown RBP8.05□□□□□ -1.12
SGIP1-201ENST00000237247 PUS7Q96PZ0 661 aaKnown RBP8.05□□□□□ -1.12
SGIP1-201ENST00000237247 BCCIPQ9P287 314 aaKnown RBP eCLIP8.05□□□□□ -1.12
SGIP1-201ENST00000237247 KNSTRNQ9Y448 316 aa8.05□□□□□ -1.12
SGIP1-201ENST00000237247 YTHDC2Q9H6S0 1430 aaKnown RBP8.05□□□□□ -1.12
SGIP1-201ENST00000237247 CC2D1BQ5T0F9 858 aaKnown RBP8.04□□□□□ -1.12
SGIP1-201ENST00000237247 LTN1O94822 1766 aa8.04□□□□□ -1.12
SGIP1-201ENST00000237247 CICQ96RK0 1608 aaPredicted RBP8.04□□□□□ -1.12
SGIP1-201ENST00000237247 C20orf194Q5TEA3 1177 aa8.04□□□□□ -1.12
SGIP1-201ENST00000237247 PLIN1O60240 522 aa8.03□□□□□ -1.12
SGIP1-201ENST00000237247 RAPGEF3O95398 923 aa8.03□□□□□ -1.12
SGIP1-201ENST00000237247 L1TD1Q5T7N2 865 aaKnown RBP8.03□□□□□ -1.12
SGIP1-201ENST00000237247 NCAPD2Q15021 1401 aa8.03□□□□□ -1.12
SGIP1-201ENST00000237247 KIF1AQ12756 1690 aa8.03□□□□□ -1.12
SGIP1-201ENST00000237247 PAPPAQ13219 1627 aa8.03□□□□□ -1.12
SGIP1-201ENST00000237247 COL22A1Q8NFW1 1626 aaPredicted RBP8.03□□□□□ -1.12
SGIP1-201ENST00000237247 PARP4Q9UKK3 1724 aaKnown RBP8.03□□□□□ -1.12
SGIP1-201ENST00000237247 PHF23Q9BUL5 403 aaPredicted RBP8.03□□□□□ -1.12
SGIP1-201ENST00000237247 DNAJC5Q9H3Z4 198 aa8.03□□□□□ -1.12
SGIP1-201ENST00000237247 C14orf93Q9H972 538 aaKnown RBP8.03□□□□□ -1.12
SGIP1-201ENST00000237247 TERF1P54274 439 aa8.02□□□□□ -1.13
SGIP1-201ENST00000237247 USP19O94966 1318 aa8.02□□□□□ -1.13
SGIP1-201ENST00000237247 PLCH1Q4KWH8 1693 aa8.02□□□□□ -1.13
SGIP1-201ENST00000237247 SAMD1Q6SPF0 538 aaPredicted RBP8.02□□□□□ -1.13
SGIP1-201ENST00000237247 ADGRF5Q8IZF2 1346 aa8.02□□□□□ -1.13
SGIP1-201ENST00000237247 TMEM51Q9NW97 253 aa8.02□□□□□ -1.13
SGIP1-201ENST00000237247 PLEKHG1Q9ULL1 1385 aa8.02□□□□□ -1.13
SGIP1-201ENST00000237247 SETD1BQ9UPS6 1966 aaKnown RBP8.01□□□□□ -1.13
SGIP1-201ENST00000237247 NFAT5O94916 1531 aa8.01□□□□□ -1.13
SGIP1-201ENST00000237247 CCDC27Q2M243 656 aa8.01□□□□□ -1.13
SGIP1-201ENST00000237247 SLIT3O75094 1523 aa8.01□□□□□ -1.13
SGIP1-201ENST00000237247 NSD2O96028 1365 aa8.01□□□□□ -1.13
SGIP1-201ENST00000237247 ZFP91Q96JP5 570 aaPredicted RBP8.01□□□□□ -1.13
SGIP1-201ENST00000237247 PKD1L3Q7Z443 1732 aa8□□□□□ -1.13
SGIP1-201ENST00000237247 SIRT1Q96EB6 747 aa7.99□□□□□ -1.13
SGIP1-201ENST00000237247 DMTNQ08495 405 aa7.99□□□□□ -1.13
SGIP1-201ENST00000237247 BECN1Q14457 450 aa7.99□□□□□ -1.13
SGIP1-201ENST00000237247 RGPD2P0DJD1 1756 aa7.99□□□□□ -1.13
SGIP1-201ENST00000237247 KDM3BQ7LBC6 1761 aa7.99□□□□□ -1.13
SGIP1-201ENST00000237247 CDK12Q9NYV4 1490 aaPredicted RBP7.99□□□□□ -1.13
SGIP1-201ENST00000237247 RGL3Q3MIN7 710 aa7.99□□□□□ -1.13
SGIP1-201ENST00000237247 DHX37Q8IY37 1157 aaKnown RBP7.99□□□□□ -1.13
SGIP1-201ENST00000237247 PMFBP1Q8TBY8 1022 aa7.99□□□□□ -1.13
SGIP1-201ENST00000237247 ABCC11Q96J66 1382 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms