RNA–Protein interactions for RNA: ENST00000231136.3

PCDHB6-201, Transcript of protocadherin beta 6, humanhuman

APPRIS P1 BASIC

Gene PCDHB6, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6-201ENST00000231136 CPS1P31327 1500 aa17.14■□□□□ 0.33
PCDHB6-201ENST00000231136 DDX17Q92841 729 aaKnown RBP17.13■□□□□ 0.33
PCDHB6-201ENST00000231136 ATP7BP35670 1465 aa17.12■□□□□ 0.33
PCDHB6-201ENST00000231136 ORAI2Q96SN7 254 aa17.12■□□□□ 0.33
PCDHB6-201ENST00000231136 ZBTB7CA1YPR0 619 aa17.11■□□□□ 0.33
PCDHB6-201ENST00000231136 ESCO1Q5FWF5 840 aa17.11■□□□□ 0.33
PCDHB6-201ENST00000231136 SIRT1Q96EB6 747 aa17.11■□□□□ 0.33
PCDHB6-201ENST00000231136 TCP11L2Q8N4U5 519 aa17.11■□□□□ 0.33
PCDHB6-201ENST00000231136 COG3Q96JB2 828 aa17.11■□□□□ 0.33
PCDHB6-201ENST00000231136 CFAP53Q96M91 514 aa17.11■□□□□ 0.33
PCDHB6-201ENST00000231136 NKTRP30414 1462 aaKnown RBP17.11■□□□□ 0.33
PCDHB6-201ENST00000231136 LMOD2Q6P5Q4 547 aa17.1■□□□□ 0.33
PCDHB6-201ENST00000231136 PROSER2Q86WR7 435 aaPredicted RBP17.1■□□□□ 0.33
PCDHB6-201ENST00000231136 TTC21BQ7Z4L5 1316 aa17.1■□□□□ 0.33
PCDHB6-201ENST00000231136 SETD1BQ9UPS6 1966 aaKnown RBP17.1■□□□□ 0.33
PCDHB6-201ENST00000231136 BLMP54132 1417 aaPredicted RBP17.09■□□□□ 0.33
PCDHB6-201ENST00000231136 FOXO3O43524 673 aa17.09■□□□□ 0.33
PCDHB6-201ENST00000231136 NPHP4O75161 1426 aaPredicted RBP17.08■□□□□ 0.33
PCDHB6-201ENST00000231136 CPSF1Q10570 1443 aaKnown RBP17.08■□□□□ 0.33
PCDHB6-201ENST00000231136 POLR3AO14802 1390 aaPredicted RBP17.08■□□□□ 0.32
PCDHB6-201ENST00000231136 NINLQ9Y2I6 1382 aa17.07■□□□□ 0.32
PCDHB6-201ENST00000231136 SMG6Q86US8 1419 aaKnown RBP17.06■□□□□ 0.32
PCDHB6-201ENST00000231136 DIAPH1O60610 1272 aaKnown RBP17.06■□□□□ 0.32
PCDHB6-201ENST00000231136 NPM2Q86SE8 214 aaKnown RBP17.06■□□□□ 0.32
PCDHB6-201ENST00000231136 HSP90AB2PQ58FF8 381 aa17.06■□□□□ 0.32
PCDHB6-201ENST00000231136 NLRP6P59044 892 aa17.05■□□□□ 0.32
PCDHB6-201ENST00000231136 RCAN3Q9UKA8 241 aa17.05■□□□□ 0.32
PCDHB6-201ENST00000231136 RGPD8O14715 1765 aaPredicted RBP17.05■□□□□ 0.32
PCDHB6-201ENST00000231136 PLEKHG3A1L390 1219 aa17.04■□□□□ 0.32
PCDHB6-201ENST00000231136 LTV1Q96GA3 475 aaPredicted RBP17.04■□□□□ 0.32
PCDHB6-201ENST00000231136 THUMPD2Q9BTF0 503 aaKnown RBP17.04■□□□□ 0.32
PCDHB6-201ENST00000231136 GOLGA2Q08379 1002 aa17.04■□□□□ 0.32
PCDHB6-201ENST00000231136 PHACTR3Q96KR7 559 aa17.04■□□□□ 0.32
PCDHB6-201ENST00000231136 AEBP1Q8IUX7 1158 aa17.03■□□□□ 0.32
PCDHB6-201ENST00000231136 WWC1Q8IX03 1113 aa17.03■□□□□ 0.32
PCDHB6-201ENST00000231136 ABTB2Q8N961 1025 aa17.03■□□□□ 0.32
PCDHB6-201ENST00000231136 ZNF692Q9BU19 519 aaPredicted RBP17.03■□□□□ 0.32
PCDHB6-201ENST00000231136 EDC4Q6P2E9 1401 aaKnown RBP17.03■□□□□ 0.32
PCDHB6-201ENST00000231136 DUSP27Q5VZP5 1158 aa17.02■□□□□ 0.32
PCDHB6-201ENST00000231136 RUNDC1Q96C34 613 aa17.02■□□□□ 0.32
PCDHB6-201ENST00000231136 PRKAR2BP31323 418 aa17.02■□□□□ 0.31
PCDHB6-201ENST00000231136 C20orf194Q5TEA3 1177 aa17.02■□□□□ 0.31
PCDHB6-201ENST00000231136 PHF8Q9UPP1 1060 aa17.02■□□□□ 0.31
PCDHB6-201ENST00000231136 NSD2O96028 1365 aa17.01■□□□□ 0.31
PCDHB6-201ENST00000231136 DIP2AQ14689 1571 aa17.01■□□□□ 0.31
PCDHB6-201ENST00000231136 BCL2L13Q9BXK5 485 aa17.01■□□□□ 0.31
PCDHB6-201ENST00000231136 EXOC6Q8TAG9 804 aa17.01■□□□□ 0.31
PCDHB6-201ENST00000231136 PTCH1Q13635 1447 aa17■□□□□ 0.31
PCDHB6-201ENST00000231136 PSME1Q06323 249 aa17■□□□□ 0.31
PCDHB6-201ENST00000231136 TSR2Q969E8 191 aaKnown RBP17■□□□□ 0.31
PCDHB6-201ENST00000231136 USP6P35125 1406 aa17■□□□□ 0.31
PCDHB6-201ENST00000231136 ZNF521Q96K83 1311 aa17■□□□□ 0.31
PCDHB6-201ENST00000231136 KNDC1Q76NI1 1749 aa16.99■□□□□ 0.31
PCDHB6-201ENST00000231136 BCAR3O75815 825 aa16.99■□□□□ 0.31
PCDHB6-201ENST00000231136 SLFN5Q08AF3 891 aa16.99■□□□□ 0.31
PCDHB6-201ENST00000231136 LAS1LQ9Y4W2 734 aaKnown RBP16.99■□□□□ 0.31
PCDHB6-201ENST00000231136 USP32Q8NFA0 1604 aa16.98■□□□□ 0.31
PCDHB6-201ENST00000231136 CDC42BPGQ6DT37 1551 aa16.98■□□□□ 0.31
PCDHB6-201ENST00000231136 DCTN1Q14203 1278 aa16.97■□□□□ 0.31
PCDHB6-201ENST00000231136 PLEKHF1Q96S99 279 aa16.97■□□□□ 0.31
PCDHB6-201ENST00000231136 ZNF335Q9H4Z2 1342 aaPredicted RBP16.97■□□□□ 0.31
PCDHB6-201ENST00000231136 FAM83GA6ND36 823 aa16.97■□□□□ 0.31
PCDHB6-201ENST00000231136 RIPK4P57078 832 aa16.97■□□□□ 0.31
PCDHB6-201ENST00000231136 SKAP1Q86WV1 359 aa16.97■□□□□ 0.31
PCDHB6-201ENST00000231136 SHPRHQ149N8 1683 aa16.97■□□□□ 0.31
PCDHB6-201ENST00000231136 MAP3K19Q56UN5 1328 aa16.96■□□□□ 0.31
PCDHB6-201ENST00000231136 IL13P35225 146 aa16.96■□□□□ 0.31
PCDHB6-201ENST00000231136 EIF4A2Q14240 407 aaKnown RBP16.96■□□□□ 0.31
PCDHB6-201ENST00000231136 MAPK8IP3Q9UPT6 1336 aa16.96■□□□□ 0.3
PCDHB6-201ENST00000231136 TMPOP42166 694 aaKnown RBP16.95■□□□□ 0.3
PCDHB6-201ENST00000231136 RRP1P56182 461 aaKnown RBP16.95■□□□□ 0.3
PCDHB6-201ENST00000231136 SULT6B1Q6IMI4 303 aa16.95■□□□□ 0.3
PCDHB6-201ENST00000231136 TMEM94Q12767 1356 aa16.95■□□□□ 0.3
PCDHB6-201ENST00000231136 USHBP1Q8N6Y0 703 aa16.95■□□□□ 0.3
PCDHB6-201ENST00000231136 XRN1Q8IZH2 1706 aaKnown RBP16.95■□□□□ 0.3
PCDHB6-201ENST00000231136 PDE3BQ13370 1112 aa16.95■□□□□ 0.3
PCDHB6-201ENST00000231136 AMPHP49418 695 aa16.94■□□□□ 0.3
PCDHB6-201ENST00000231136 MAP2P11137 1827 aaKnown RBP16.94■□□□□ 0.3
PCDHB6-201ENST00000231136 TRIM35Q9UPQ4 493 aa16.94■□□□□ 0.3
PCDHB6-201ENST00000231136 CABLES1Q8TDN4 633 aa16.93■□□□□ 0.3
PCDHB6-201ENST00000231136 RSPH6AQ9H0K4 717 aa16.93■□□□□ 0.3
PCDHB6-201ENST00000231136 COL3A1P02461 1466 aaPredicted RBP16.93■□□□□ 0.3
PCDHB6-201ENST00000231136 PIK3R4Q99570 1358 aa16.93■□□□□ 0.3
PCDHB6-201ENST00000231136 ZNF142P52746 1687 aaPredicted RBP16.92■□□□□ 0.3
PCDHB6-201ENST00000231136 TNNQ9UQP3 1299 aa16.92■□□□□ 0.3
PCDHB6-201ENST00000231136 ELL2O00472 640 aaPredicted RBP16.92■□□□□ 0.3
PCDHB6-201ENST00000231136 TCERG1O14776 1098 aaKnown RBP16.92■□□□□ 0.3
PCDHB6-201ENST00000231136 CHD2O14647 1828 aaKnown RBP16.91■□□□□ 0.3
PCDHB6-201ENST00000231136 PNPLA6Q8IY17 1366 aa16.91■□□□□ 0.3
PCDHB6-201ENST00000231136 NALCNQ8IZF0 1738 aa16.91■□□□□ 0.3
PCDHB6-201ENST00000231136 KIF20BQ96Q89 1820 aa16.91■□□□□ 0.3
PCDHB6-201ENST00000231136 FRAT1Q92837 279 aaPredicted RBP16.9■□□□□ 0.3
PCDHB6-201ENST00000231136 ATF3P18847 181 aa16.9■□□□□ 0.3
PCDHB6-201ENST00000231136 MSH5O43196 834 aa16.9■□□□□ 0.3
PCDHB6-201ENST00000231136 NBR1Q14596 966 aa16.9■□□□□ 0.3
PCDHB6-201ENST00000231136 C19orf44Q9H6X5 657 aa16.9■□□□□ 0.3
PCDHB6-201ENST00000231136 CRBNQ96SW2 442 aa16.89■□□□□ 0.29
PCDHB6-201ENST00000231136 SSH2Q76I76 1423 aa16.89■□□□□ 0.29
PCDHB6-201ENST00000231136 ADGRL3Q9HAR2 1447 aa16.89■□□□□ 0.29
PCDHB6-201ENST00000231136 ADGRB2O60241 1585 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms