RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 SETD1BQ9UPS6 1966 aaKnown RBP5.5□□□□□ -1.53
CDH9-201ENST00000231021 TLDC2A0PJX2 215 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 DHX16O60231 1041 aaKnown RBP5.49□□□□□ -1.53
CDH9-201ENST00000231021 MAP2K5Q13163 448 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 MAP9Q49MG5 647 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 SMC5Q8IY18 1101 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 RASEFQ8IZ41 740 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 PIK3R5Q8WYR1 880 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 PRKAG2Q9UGJ0 569 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 TMA7Q9Y2S6 64 aaKnown RBP5.49□□□□□ -1.53
CDH9-201ENST00000231021 DNAJA1P31689 397 aaKnown RBP5.49□□□□□ -1.53
CDH9-201ENST00000231021 RFC5P40937 340 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 VAC14Q08AM6 782 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 MYBPC2Q14324 1141 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 CSPP1Q1MSJ5 1256 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 PLEKHG6Q3KR16 790 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 SH3D19Q5HYK7 790 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 TMEM164Q5U3C3 297 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 ANKRD13DQ6ZTN6 518 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 CENPOQ9BU64 300 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.49□□□□□ -1.53
CDH9-201ENST00000231021 TFIP11Q9UBB9 837 aaKnown RBP5.49□□□□□ -1.53
CDH9-201ENST00000231021 BIN2Q9UBW5 565 aaPredicted RBP5.49□□□□□ -1.53
CDH9-201ENST00000231021 ZBTB47Q9UFB7 747 aaPredicted RBP5.49□□□□□ -1.53
CDH9-201ENST00000231021 RBM19Q9Y4C8 960 aaKnown RBP5.49□□□□□ -1.53
CDH9-201ENST00000231021 SPDYE5A6NIY4 337 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 LGR5O75473 907 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 MARSP56192 900 aaKnown RBP5.49□□□□□ -1.53
CDH9-201ENST00000231021 ZMIZ1Q9ULJ6 1067 aa5.49□□□□□ -1.53
CDH9-201ENST00000231021 GRXCR2A6NFK2 248 aa5.48□□□□□ -1.53
CDH9-201ENST00000231021 JDP2Q8WYK2 163 aa5.48□□□□□ -1.53
CDH9-201ENST00000231021 YTHDC1Q96MU7 727 aaKnown RBP5.48□□□□□ -1.53
CDH9-201ENST00000231021 IRF2BPLQ9H1B7 796 aa5.48□□□□□ -1.53
CDH9-201ENST00000231021 SPATA31D1Q6ZQQ2 1576 aa5.48□□□□□ -1.53
CDH9-201ENST00000231021 RGL3Q3MIN7 710 aa5.48□□□□□ -1.53
CDH9-201ENST00000231021 COL4A3BPQ9Y5P4 624 aa5.48□□□□□ -1.53
CDH9-201ENST00000231021 ZNF579Q8NAF0 562 aaKnown RBP5.47□□□□□ -1.53
CDH9-201ENST00000231021 ACBD3Q9H3P7 528 aa5.47□□□□□ -1.53
CDH9-201ENST00000231021 IFT57Q9NWB7 429 aa5.47□□□□□ -1.53
CDH9-201ENST00000231021 EEA1Q15075 1411 aa5.47□□□□□ -1.53
CDH9-201ENST00000231021 MNX1P50219 401 aaPredicted RBP5.47□□□□□ -1.53
CDH9-201ENST00000231021 MDM2Q00987 491 aaPredicted RBP5.47□□□□□ -1.53
CDH9-201ENST00000231021 BIRC2Q13490 618 aa5.47□□□□□ -1.53
CDH9-201ENST00000231021 FILIP1Q7Z7B0 1213 aa5.47□□□□□ -1.53
CDH9-201ENST00000231021 NT5DC4Q86YG4 428 aa5.47□□□□□ -1.53
CDH9-201ENST00000231021 BEGAINQ9BUH8 593 aa5.47□□□□□ -1.53
CDH9-201ENST00000231021 MCCD1P59942 119 aaPredicted RBP5.46□□□□□ -1.53
CDH9-201ENST00000231021 KANSL2Q9H9L4 492 aa5.46□□□□□ -1.53
CDH9-201ENST00000231021 TTF2Q9UNY4 1162 aaKnown RBP5.46□□□□□ -1.53
CDH9-201ENST00000231021 THRAP3Q9Y2W1 955 aaKnown RBP5.46□□□□□ -1.53
CDH9-201ENST00000231021 MINK1Q8N4C8 1332 aaPredicted RBP5.46□□□□□ -1.54
CDH9-201ENST00000231021 DYTNA2CJ06 578 aa5.46□□□□□ -1.54
CDH9-201ENST00000231021 GPR37L1O60883 481 aa5.46□□□□□ -1.54
CDH9-201ENST00000231021 STK10O94804 968 aaKnown RBP5.46□□□□□ -1.54
CDH9-201ENST00000231021 MTMR3Q13615 1198 aa5.46□□□□□ -1.54
CDH9-201ENST00000231021 WDR78Q5VTH9 848 aa5.46□□□□□ -1.54
CDH9-201ENST00000231021 PODNQ7Z5L7 613 aa5.46□□□□□ -1.54
CDH9-201ENST00000231021 WDR75Q8IWA0 830 aaKnown RBP5.46□□□□□ -1.54
CDH9-201ENST00000231021 EMILIN3Q9NT22 766 aa5.46□□□□□ -1.54
CDH9-201ENST00000231021 RYDENQ9NUL5 291 aaKnown RBP5.46□□□□□ -1.54
CDH9-201ENST00000231021 GNEQ9Y223 722 aaKnown RBP5.46□□□□□ -1.54
CDH9-201ENST00000231021 GTF2E1P29083 439 aaPredicted RBP5.46□□□□□ -1.54
CDH9-201ENST00000231021 PRIM1P49642 420 aaKnown RBP5.46□□□□□ -1.54
CDH9-201ENST00000231021 TERF1P54274 439 aa5.46□□□□□ -1.54
CDH9-201ENST00000231021 GSE1Q14687 1217 aa5.46□□□□□ -1.54
CDH9-201ENST00000231021 C4orf46Q504U0 113 aa5.46□□□□□ -1.54
CDH9-201ENST00000231021 SKAP1Q86WV1 359 aa5.46□□□□□ -1.54
CDH9-201ENST00000231021 NEUROD6Q96NK8 337 aa5.46□□□□□ -1.54
CDH9-201ENST00000231021 FAM126AQ9BYI3 521 aaPredicted RBP5.46□□□□□ -1.54
CDH9-201ENST00000231021 LIMD1Q9UGP4 676 aa5.46□□□□□ -1.54
CDH9-201ENST00000231021 NEFMP07197 916 aa5.45□□□□□ -1.54
CDH9-201ENST00000231021 MYSM1Q5VVJ2 828 aa5.45□□□□□ -1.54
CDH9-201ENST00000231021 PPP1R18Q6NYC8 613 aa5.45□□□□□ -1.54
CDH9-201ENST00000231021 TINF2Q9BSI4 451 aa5.45□□□□□ -1.54
CDH9-201ENST00000231021 LRRC27Q9C0I9 530 aa5.45□□□□□ -1.54
CDH9-201ENST00000231021 WWC3Q9ULE0 1092 aa5.45□□□□□ -1.54
CDH9-201ENST00000231021 CCDC61Q9Y6R9 512 aa5.45□□□□□ -1.54
CDH9-201ENST00000231021 LRRC41Q15345 812 aa5.45□□□□□ -1.54
CDH9-201ENST00000231021 SF3A1Q15459 793 aaKnown RBP5.45□□□□□ -1.54
CDH9-201ENST00000231021 SYCP2LQ5T4T6 812 aa5.45□□□□□ -1.54
CDH9-201ENST00000231021 PCDH12Q9NPG4 1184 aa5.45□□□□□ -1.54
CDH9-201ENST00000231021 PHF8Q9UPP1 1060 aa5.45□□□□□ -1.54
CDH9-201ENST00000231021 SH3BP1Q9Y3L3 701 aa5.45□□□□□ -1.54
CDH9-201ENST00000231021 TNIKQ9UKE5 1360 aa5.45□□□□□ -1.54
CDH9-201ENST00000231021 NDUFV2P19404 249 aa5.44□□□□□ -1.54
CDH9-201ENST00000231021 PPP4CP60510 307 aa5.44□□□□□ -1.54
CDH9-201ENST00000231021 ZNF211Q13398 564 aaPredicted RBP5.44□□□□□ -1.54
CDH9-201ENST00000231021 ZNF280DQ6N043 979 aa5.44□□□□□ -1.54
CDH9-201ENST00000231021 FBXO33Q7Z6M2 555 aa5.44□□□□□ -1.54
CDH9-201ENST00000231021 CAPN10Q9HC96 672 aa5.44□□□□□ -1.54
CDH9-201ENST00000231021 PCDHB8Q9UN66 801 aa5.44□□□□□ -1.54
CDH9-201ENST00000231021 PCDHB13Q9Y5F0 798 aa5.44□□□□□ -1.54
CDH9-201ENST00000231021 RPGRIP1LQ68CZ1 1315 aa5.44□□□□□ -1.54
CDH9-201ENST00000231021 C10orf62Q5T681 223 aaPredicted RBP5.44□□□□□ -1.54
CDH9-201ENST00000231021 SFMBT1Q9UHJ3 866 aa5.44□□□□□ -1.54
CDH9-201ENST00000231021 FBXO9Q9UK97 447 aaPredicted RBP5.44□□□□□ -1.54
CDH9-201ENST00000231021 CFAP69A5D8W1 941 aa5.43□□□□□ -1.54
CDH9-201ENST00000231021 IER2Q9BTL4 223 aa5.43□□□□□ -1.54
CDH9-201ENST00000231021 NOP58Q9Y2X3 529 aaKnown RBP5.43□□□□□ -1.54
CDH9-201ENST00000231021 PCDHGB7Q9Y5F8 929 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms