RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 DCCP43146 1447 aa12.17□□□□□ -0.46
HLA-DOA-201ENST00000229829 TRPM3Q9HCF6 1732 aaPredicted RBP12.16□□□□□ -0.46
HLA-DOA-201ENST00000229829 PIK3R4Q99570 1358 aa12.16□□□□□ -0.46
HLA-DOA-201ENST00000229829 HSP90AA2PQ14568 343 aaPredicted RBP12.16□□□□□ -0.46
HLA-DOA-201ENST00000229829 HOMEZQ8IX15 550 aa12.16□□□□□ -0.46
HLA-DOA-201ENST00000229829 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.15□□□□□ -0.46
HLA-DOA-201ENST00000229829 TNNT2P45379 298 aaPredicted RBP12.14□□□□□ -0.47
HLA-DOA-201ENST00000229829 ABCC6O95255 1503 aa12.14□□□□□ -0.47
HLA-DOA-201ENST00000229829 FAM161AQ3B820 660 aa12.14□□□□□ -0.47
HLA-DOA-201ENST00000229829 ITSN1Q15811 1721 aa12.14□□□□□ -0.47
HLA-DOA-201ENST00000229829 DDRGK1Q96HY6 314 aa12.14□□□□□ -0.47
HLA-DOA-201ENST00000229829 EIF3AQ14152 1382 aaKnown RBP12.14□□□□□ -0.47
HLA-DOA-201ENST00000229829 IGHDP01880 384 aa12.13□□□□□ -0.47
HLA-DOA-201ENST00000229829 NEUROD2Q15784 382 aa12.13□□□□□ -0.47
HLA-DOA-201ENST00000229829 NPC1L1Q9UHC9 1359 aa12.13□□□□□ -0.47
HLA-DOA-201ENST00000229829 PLCH1Q4KWH8 1693 aa12.13□□□□□ -0.47
HLA-DOA-201ENST00000229829 STAC3Q96MF2 364 aa12.13□□□□□ -0.47
HLA-DOA-201ENST00000229829 COL16A1Q07092 1604 aaPredicted RBP12.12□□□□□ -0.47
HLA-DOA-201ENST00000229829 NRKQ7Z2Y5 1582 aa12.12□□□□□ -0.47
HLA-DOA-201ENST00000229829 RRP7AQ9Y3A4 280 aaKnown RBP12.12□□□□□ -0.47
HLA-DOA-201ENST00000229829 KANK1Q14678 1352 aa12.12□□□□□ -0.47
HLA-DOA-201ENST00000229829 HSP90AA1P07900 732 aaKnown RBP12.12□□□□□ -0.47
HLA-DOA-201ENST00000229829 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
HLA-DOA-201ENST00000229829 E9PSI1 815 aa12.11□□□□□ -0.47
HLA-DOA-201ENST00000229829 PANK1Q8TE04 598 aa12.11□□□□□ -0.47
HLA-DOA-201ENST00000229829 ARHGEF28Q8N1W1 1705 aaKnown RBP12.11□□□□□ -0.47
HLA-DOA-201ENST00000229829 ARID3AQ99856 593 aa12.11□□□□□ -0.47
HLA-DOA-201ENST00000229829 GZF1Q9H116 711 aaPredicted RBP12.11□□□□□ -0.47
HLA-DOA-201ENST00000229829 PNNQ9H307 717 aaKnown RBP12.11□□□□□ -0.47
HLA-DOA-201ENST00000229829 TRAK1Q9UPV9 953 aa12.1□□□□□ -0.47
HLA-DOA-201ENST00000229829 WWC1Q8IX03 1113 aa12.1□□□□□ -0.47
HLA-DOA-201ENST00000229829 SLC12A5Q9H2X9 1139 aa12.1□□□□□ -0.47
HLA-DOA-201ENST00000229829 COG6Q9Y2V7 657 aa12.1□□□□□ -0.47
HLA-DOA-201ENST00000229829 SLKQ9H2G2 1235 aaPredicted RBP12.1□□□□□ -0.47
HLA-DOA-201ENST00000229829 ALS2Q96Q42 1657 aa12.1□□□□□ -0.47
HLA-DOA-201ENST00000229829 ANKRD26Q9UPS8 1709 aa12.1□□□□□ -0.47
HLA-DOA-201ENST00000229829 FAM43AQ8N2R8 423 aa12.09□□□□□ -0.47
HLA-DOA-201ENST00000229829 TMEM132EQ6IEE7 984 aa12.09□□□□□ -0.47
HLA-DOA-201ENST00000229829 CFAP65Q6ZU64 1925 aaKnown RBP12.09□□□□□ -0.47
HLA-DOA-201ENST00000229829 NWD2Q9ULI1 1742 aa12.08□□□□□ -0.47
HLA-DOA-201ENST00000229829 PTCH1Q13635 1447 aa12.08□□□□□ -0.47
HLA-DOA-201ENST00000229829 TNNQ9UQP3 1299 aa12.08□□□□□ -0.48
HLA-DOA-201ENST00000229829 AKAP12Q02952 1782 aa12.08□□□□□ -0.48
HLA-DOA-201ENST00000229829 SEC24BO95487 1268 aa12.07□□□□□ -0.48
HLA-DOA-201ENST00000229829 CENPJQ9HC77 1338 aaPredicted RBP12.07□□□□□ -0.48
HLA-DOA-201ENST00000229829 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.07□□□□□ -0.48
HLA-DOA-201ENST00000229829 CANXP27824 592 aaKnown RBP12.07□□□□□ -0.48
HLA-DOA-201ENST00000229829 MORC1Q86VD1 984 aa12.07□□□□□ -0.48
HLA-DOA-201ENST00000229829 RRAGDQ9NQL2 400 aaPredicted RBP12.06□□□□□ -0.48
HLA-DOA-201ENST00000229829 BCL2L13Q9BXK5 485 aa12.06□□□□□ -0.48
HLA-DOA-201ENST00000229829 POGKQ9P215 609 aa12.06□□□□□ -0.48
HLA-DOA-201ENST00000229829 NRAPQ86VF7 1730 aa12.06□□□□□ -0.48
HLA-DOA-201ENST00000229829 NSD3Q9BZ95 1437 aa12.06□□□□□ -0.48
HLA-DOA-201ENST00000229829 SPRYD3Q8NCJ5 442 aa12.06□□□□□ -0.48
HLA-DOA-201ENST00000229829 SENP3Q9H4L4 574 aaPredicted RBP12.06□□□□□ -0.48
HLA-DOA-201ENST00000229829 CAMTA1Q9Y6Y1 1673 aa12.05□□□□□ -0.48
HLA-DOA-201ENST00000229829 NUTM2DQ5VT03 806 aaPredicted RBP12.05□□□□□ -0.48
HLA-DOA-201ENST00000229829 POLR3AO14802 1390 aaPredicted RBP12.05□□□□□ -0.48
HLA-DOA-201ENST00000229829 ADGRB1O14514 1584 aa12.05□□□□□ -0.48
HLA-DOA-201ENST00000229829 TCP11L2Q8N4U5 519 aa12.05□□□□□ -0.48
HLA-DOA-201ENST00000229829 CLUAP1Q96AJ1 413 aa12.05□□□□□ -0.48
HLA-DOA-201ENST00000229829 USP19O94966 1318 aa12.05□□□□□ -0.48
HLA-DOA-201ENST00000229829 USP32Q8NFA0 1604 aa12.04□□□□□ -0.48
HLA-DOA-201ENST00000229829 RLBP1P12271 317 aa12.04□□□□□ -0.48
HLA-DOA-201ENST00000229829 PDE3AQ14432 1141 aa12.04□□□□□ -0.48
HLA-DOA-201ENST00000229829 CICQ96RK0 1608 aaPredicted RBP12.04□□□□□ -0.48
HLA-DOA-201ENST00000229829 MTHFSP49914 203 aa12.03□□□□□ -0.48
HLA-DOA-201ENST00000229829 CGNL1Q0VF96 1302 aa12.03□□□□□ -0.48
HLA-DOA-201ENST00000229829 GGT6Q6P531 493 aa12.03□□□□□ -0.48
HLA-DOA-201ENST00000229829 RARSP54136 660 aaKnown RBP12.03□□□□□ -0.48
HLA-DOA-201ENST00000229829 QSER1Q2KHR3 1735 aa12.02□□□□□ -0.48
HLA-DOA-201ENST00000229829 PCDHB15Q9Y5E8 787 aa12.02□□□□□ -0.49
HLA-DOA-201ENST00000229829 RUNDC1Q96C34 613 aa12.02□□□□□ -0.49
HLA-DOA-201ENST00000229829 ZMYM3Q14202 1370 aa12.01□□□□□ -0.49
HLA-DOA-201ENST00000229829 C14orf93Q9H972 538 aaKnown RBP12.01□□□□□ -0.49
HLA-DOA-201ENST00000229829 SBNO2Q9Y2G9 1366 aa12□□□□□ -0.49
HLA-DOA-201ENST00000229829 SAFB2Q14151 953 aaKnown RBP eCLIP12□□□□□ -0.49
HLA-DOA-201ENST00000229829 NGEFQ8N5V2 710 aa12□□□□□ -0.49
HLA-DOA-201ENST00000229829 PLEKHG1Q9ULL1 1385 aa12□□□□□ -0.49
HLA-DOA-201ENST00000229829 CABP2Q9NPB3 220 aa11.98□□□□□ -0.49
HLA-DOA-201ENST00000229829 MON2Q7Z3U7 1717 aa11.97□□□□□ -0.49
HLA-DOA-201ENST00000229829 QRICH2Q9H0J4 1663 aa11.97□□□□□ -0.49
HLA-DOA-201ENST00000229829 U2AF1L5P0DN76 240 aaPredicted RBP11.97□□□□□ -0.49
HLA-DOA-201ENST00000229829 U2AF1Q01081 240 aaKnown RBP eCLIP11.97□□□□□ -0.49
HLA-DOA-201ENST00000229829 PDZRN3Q9UPQ7 1066 aa11.96□□□□□ -0.49
HLA-DOA-201ENST00000229829 MAPK8IP3Q9UPT6 1336 aa11.96□□□□□ -0.49
HLA-DOA-201ENST00000229829 TSR2Q969E8 191 aaKnown RBP11.96□□□□□ -0.49
HLA-DOA-201ENST00000229829 WDR63Q8IWG1 891 aa11.96□□□□□ -0.5
HLA-DOA-201ENST00000229829 ADAMTS13Q76LX8 1427 aa11.95□□□□□ -0.5
HLA-DOA-201ENST00000229829 VIRMAQ69YN4 1812 aaKnown RBP11.95□□□□□ -0.5
HLA-DOA-201ENST00000229829 NINLQ9Y2I6 1382 aa11.95□□□□□ -0.5
HLA-DOA-201ENST00000229829 PMFBP1Q8TBY8 1022 aa11.94□□□□□ -0.5
HLA-DOA-201ENST00000229829 CDK12Q9NYV4 1490 aaPredicted RBP11.94□□□□□ -0.5
HLA-DOA-201ENST00000229829 FAM208AQ9UK61 1670 aaKnown RBP11.94□□□□□ -0.5
HLA-DOA-201ENST00000229829 CFAP53Q96M91 514 aa11.94□□□□□ -0.5
HLA-DOA-201ENST00000229829 PANK2Q9BZ23 570 aa11.94□□□□□ -0.5
HLA-DOA-201ENST00000229829 STK26Q9P289 416 aa11.94□□□□□ -0.5
HLA-DOA-201ENST00000229829 L1TD1Q5T7N2 865 aaKnown RBP11.93□□□□□ -0.5
HLA-DOA-201ENST00000229829 LMO7Q8WWI1 1683 aa11.93□□□□□ -0.5
HLA-DOA-201ENST00000229829 ROBO1Q9Y6N7 1651 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms