RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 MSH6P52701 1360 aa22.09■■□□□ 1.13
GAPDH-201ENST00000229239 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.09■■□□□ 1.13
GAPDH-201ENST00000229239 EXOC6Q8TAG9 804 aa22.09■■□□□ 1.13
GAPDH-201ENST00000229239 RUNDC1Q96C34 613 aa22.09■■□□□ 1.13
GAPDH-201ENST00000229239 SIRT1Q96EB6 747 aa22.09■■□□□ 1.13
GAPDH-201ENST00000229239 ANKRD26Q9UPS8 1709 aa22.08■■□□□ 1.13
GAPDH-201ENST00000229239 CD163L1Q9NR16 1453 aa22.08■■□□□ 1.13
GAPDH-201ENST00000229239 MTHFSP49914 203 aa22.08■■□□□ 1.13
GAPDH-201ENST00000229239 HDGFL2Q7Z4V5 671 aaPredicted RBP22.08■■□□□ 1.13
GAPDH-201ENST00000229239 C14orf37Q86TY3 774 aa22.08■■□□□ 1.13
GAPDH-201ENST00000229239 NCOA3Q9Y6Q9 1424 aa22.08■■□□□ 1.13
GAPDH-201ENST00000229239 CDK19Q9BWU1 502 aa22.07■■□□□ 1.12
GAPDH-201ENST00000229239 ATP7BP35670 1465 aa22.06■■□□□ 1.12
GAPDH-201ENST00000229239 XRN1Q8IZH2 1706 aaKnown RBP22.06■■□□□ 1.12
GAPDH-201ENST00000229239 KNDC1Q76NI1 1749 aa22.05■■□□□ 1.12
GAPDH-201ENST00000229239 FANCIQ9NVI1 1328 aa22.05■■□□□ 1.12
GAPDH-201ENST00000229239 TECPR2O15040 1411 aa22.05■■□□□ 1.12
GAPDH-201ENST00000229239 FAM135BQ49AJ0 1406 aa22.05■■□□□ 1.12
GAPDH-201ENST00000229239 MYT1Q01538 1121 aa22.05■■□□□ 1.12
GAPDH-201ENST00000229239 C19orf44Q9H6X5 657 aa22.04■■□□□ 1.12
GAPDH-201ENST00000229239 TNNT2P45379 298 aaPredicted RBP22.03■■□□□ 1.12
GAPDH-201ENST00000229239 CCDC27Q2M243 656 aa22.03■■□□□ 1.12
GAPDH-201ENST00000229239 SLAIN2Q9P270 581 aa22.03■■□□□ 1.12
GAPDH-201ENST00000229239 ROBO1Q9Y6N7 1651 aa22.01■■□□□ 1.11
GAPDH-201ENST00000229239 WWC1Q8IX03 1113 aa22.01■■□□□ 1.11
GAPDH-201ENST00000229239 PHF23Q9BUL5 403 aaPredicted RBP22.01■■□□□ 1.11
GAPDH-201ENST00000229239 FYB1O15117 783 aa22■■□□□ 1.11
GAPDH-201ENST00000229239 CADPS2Q86UW7 1296 aa22■■□□□ 1.11
GAPDH-201ENST00000229239 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.99■■□□□ 1.11
GAPDH-201ENST00000229239 ATF3P18847 181 aa21.99■■□□□ 1.11
GAPDH-201ENST00000229239 WDR63Q8IWG1 891 aa21.99■■□□□ 1.11
GAPDH-201ENST00000229239 MED1Q15648 1581 aaPredicted RBP21.98■■□□□ 1.11
GAPDH-201ENST00000229239 KIF20BQ96Q89 1820 aa21.97■■□□□ 1.11
GAPDH-201ENST00000229239 PLIN1O60240 522 aa21.97■■□□□ 1.11
GAPDH-201ENST00000229239 CRBNQ96SW2 442 aa21.97■■□□□ 1.11
GAPDH-201ENST00000229239 CABP1Q9NZU7 370 aa21.97■■□□□ 1.11
GAPDH-201ENST00000229239 COL3A1P02461 1466 aaPredicted RBP21.97■■□□□ 1.11
GAPDH-201ENST00000229239 ADGRB2O60241 1585 aa21.96■■□□□ 1.11
GAPDH-201ENST00000229239 TCP11L2Q8N4U5 519 aa21.96■■□□□ 1.11
GAPDH-201ENST00000229239 WAPLQ7Z5K2 1190 aa21.96■■□□□ 1.11
GAPDH-201ENST00000229239 GGNBP2Q9H3C7 697 aa21.96■■□□□ 1.11
GAPDH-201ENST00000229239 WASLO00401 505 aaPredicted RBP21.95■■□□□ 1.1
GAPDH-201ENST00000229239 SPINK5Q9NQ38 1064 aaPredicted RBP21.95■■□□□ 1.1
GAPDH-201ENST00000229239 PNPLA6Q8IY17 1366 aa21.94■■□□□ 1.1
GAPDH-201ENST00000229239 ILDR2Q71H61 639 aa21.94■■□□□ 1.1
GAPDH-201ENST00000229239 ROBO2Q9HCK4 1378 aa21.94■■□□□ 1.1
GAPDH-201ENST00000229239 CPSF1Q10570 1443 aaKnown RBP21.93■■□□□ 1.1
GAPDH-201ENST00000229239 PNNQ9H307 717 aaKnown RBP21.93■■□□□ 1.1
GAPDH-201ENST00000229239 PTCH1Q13635 1447 aa21.93■■□□□ 1.1
GAPDH-201ENST00000229239 TCERG1O14776 1098 aaKnown RBP21.92■■□□□ 1.1
GAPDH-201ENST00000229239 U2AF1L5P0DN76 240 aaPredicted RBP21.92■■□□□ 1.1
GAPDH-201ENST00000229239 U2AF1Q01081 240 aaKnown RBP eCLIP21.92■■□□□ 1.1
GAPDH-201ENST00000229239 EDC4Q6P2E9 1401 aaKnown RBP21.92■■□□□ 1.1
GAPDH-201ENST00000229239 DCCP43146 1447 aa21.92■■□□□ 1.1
GAPDH-201ENST00000229239 CDC42BPGQ6DT37 1551 aa21.9■■□□□ 1.1
GAPDH-201ENST00000229239 ADGRL3Q9HAR2 1447 aa21.9■■□□□ 1.1
GAPDH-201ENST00000229239 PPIP5K1Q6PFW1 1433 aa21.89■■□□□ 1.09
GAPDH-201ENST00000229239 MS4A1P11836 297 aa21.89■■□□□ 1.09
GAPDH-201ENST00000229239 C20orf194Q5TEA3 1177 aa21.88■■□□□ 1.09
GAPDH-201ENST00000229239 NALCNQ8IZF0 1738 aa21.88■■□□□ 1.09
GAPDH-201ENST00000229239 MYH16Q9H6N6 1097 aa21.88■■□□□ 1.09
GAPDH-201ENST00000229239 PHLPP1O60346 1717 aa21.87■■□□□ 1.09
GAPDH-201ENST00000229239 PDE3AQ14432 1141 aa21.87■■□□□ 1.09
GAPDH-201ENST00000229239 DIAPH1O60610 1272 aaKnown RBP21.86■■□□□ 1.09
GAPDH-201ENST00000229239 PLEKHF1Q96S99 279 aa21.86■■□□□ 1.09
GAPDH-201ENST00000229239 CCDC61Q9Y6R9 512 aa21.86■■□□□ 1.09
GAPDH-201ENST00000229239 NUDT16Q96DE0 195 aaKnown RBP21.85■■□□□ 1.09
GAPDH-201ENST00000229239 COL16A1Q07092 1604 aaPredicted RBP21.84■■□□□ 1.09
GAPDH-201ENST00000229239 CT47B1P0C2W7 299 aaPredicted RBP21.84■■□□□ 1.09
GAPDH-201ENST00000229239 AAMPQ13685 434 aa21.84■■□□□ 1.09
GAPDH-201ENST00000229239 CENPQQ7L2Z9 268 aaPredicted RBP21.84■■□□□ 1.09
GAPDH-201ENST00000229239 RRP7AQ9Y3A4 280 aaKnown RBP21.84■■□□□ 1.09
GAPDH-201ENST00000229239 MON2Q7Z3U7 1717 aa21.84■■□□□ 1.09
GAPDH-201ENST00000229239 AATKQ6ZMQ8 1374 aa21.84■■□□□ 1.09
GAPDH-201ENST00000229239 BRINP3Q76B58 766 aa21.83■■□□□ 1.09
GAPDH-201ENST00000229239 ZNF692Q9BU19 519 aaPredicted RBP21.83■■□□□ 1.09
GAPDH-201ENST00000229239 MST1RQ04912 1400 aa21.83■■□□□ 1.09
GAPDH-201ENST00000229239 KDM2BQ8NHM5 1336 aa21.83■■□□□ 1.08
GAPDH-201ENST00000229239 MAPK8IP3Q9UPT6 1336 aa21.83■■□□□ 1.08
GAPDH-201ENST00000229239 NEUROD2Q15784 382 aa21.83■■□□□ 1.08
GAPDH-201ENST00000229239 AHDC1Q5TGY3 1603 aaPredicted RBP21.82■■□□□ 1.08
GAPDH-201ENST00000229239 U2SURPO15042 1029 aaKnown RBP21.82■■□□□ 1.08
GAPDH-201ENST00000229239 IL16Q14005 1332 aa21.82■■□□□ 1.08
GAPDH-201ENST00000229239 BCAR3O75815 825 aa21.81■■□□□ 1.08
GAPDH-201ENST00000229239 AKAP12Q02952 1782 aa21.8■■□□□ 1.08
GAPDH-201ENST00000229239 FCHSD2O94868 740 aa21.8■■□□□ 1.08
GAPDH-201ENST00000229239 TMPOP42166 694 aaKnown RBP21.8■■□□□ 1.08
GAPDH-201ENST00000229239 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.79■■□□□ 1.08
GAPDH-201ENST00000229239 CDK12Q9NYV4 1490 aaPredicted RBP21.79■■□□□ 1.08
GAPDH-201ENST00000229239 ITSN1Q15811 1721 aa21.79■■□□□ 1.08
GAPDH-201ENST00000229239 POLKQ9UBT6 870 aa21.79■■□□□ 1.08
GAPDH-201ENST00000229239 RARSP54136 660 aaKnown RBP21.78■■□□□ 1.08
GAPDH-201ENST00000229239 ANP32EQ9BTT0 268 aa21.78■■□□□ 1.08
GAPDH-201ENST00000229239 C1orf167Q5SNV9 1468 aa21.76■■□□□ 1.07
GAPDH-201ENST00000229239 NHSL1Q5SYE7 1610 aa21.76■■□□□ 1.07
GAPDH-201ENST00000229239 TOPAZ1Q8N9V7 1692 aa21.76■■□□□ 1.07
GAPDH-201ENST00000229239 CANXP27824 592 aaKnown RBP21.75■■□□□ 1.07
GAPDH-201ENST00000229239 COG3Q96JB2 828 aa21.75■■□□□ 1.07
GAPDH-201ENST00000229239 JCADQ9P266 1359 aa21.74■■□□□ 1.07
GAPDH-201ENST00000229239 NEFMP07197 916 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms