RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 PDE3BQ13370 1112 aa14.07□□□□□ -0.16
APOBEC3D-201ENST00000216099 NRXN3Q9Y4C0 1643 aa14.07□□□□□ -0.16
APOBEC3D-201ENST00000216099 ZNF219Q9P2Y4 722 aaPredicted RBP14.07□□□□□ -0.16
APOBEC3D-201ENST00000216099 NINLQ9Y2I6 1382 aa14.07□□□□□ -0.16
APOBEC3D-201ENST00000216099 YTHDC2Q9H6S0 1430 aaKnown RBP14.06□□□□□ -0.16
APOBEC3D-201ENST00000216099 UBR1Q8IWV7 1749 aa14.06□□□□□ -0.16
APOBEC3D-201ENST00000216099 ZMYND10O75800 440 aa14.06□□□□□ -0.16
APOBEC3D-201ENST00000216099 KDM4CQ9H3R0 1056 aa14.06□□□□□ -0.16
APOBEC3D-201ENST00000216099 EVC2Q86UK5 1308 aa14.06□□□□□ -0.16
APOBEC3D-201ENST00000216099 RETREG2Q8NC44 543 aa14.06□□□□□ -0.16
APOBEC3D-201ENST00000216099 RIMS2Q9UQ26 1411 aa14.05□□□□□ -0.16
APOBEC3D-201ENST00000216099 CARD14Q9BXL6 1004 aa14.05□□□□□ -0.16
APOBEC3D-201ENST00000216099 NSD3Q9BZ95 1437 aa14.04□□□□□ -0.16
APOBEC3D-201ENST00000216099 SHPRHQ149N8 1683 aa14.04□□□□□ -0.16
APOBEC3D-201ENST00000216099 ZMYM3Q14202 1370 aa14.03□□□□□ -0.16
APOBEC3D-201ENST00000216099 HOXD11P31277 338 aaPredicted RBP14.03□□□□□ -0.16
APOBEC3D-201ENST00000216099 POLA2Q14181 598 aa14.03□□□□□ -0.16
APOBEC3D-201ENST00000216099 NUTM2DQ5VT03 806 aaPredicted RBP14.03□□□□□ -0.16
APOBEC3D-201ENST00000216099 TRAIPQ9BWF2 469 aa14.03□□□□□ -0.16
APOBEC3D-201ENST00000216099 NSD2O96028 1365 aa14.02□□□□□ -0.16
APOBEC3D-201ENST00000216099 ANKRD36BQ8N2N9 1353 aa14.02□□□□□ -0.16
APOBEC3D-201ENST00000216099 BRPF3Q9ULD4 1205 aa14.02□□□□□ -0.16
APOBEC3D-201ENST00000216099 E9PSI1 815 aa14.01□□□□□ -0.17
APOBEC3D-201ENST00000216099 KIF20BQ96Q89 1820 aa14.01□□□□□ -0.17
APOBEC3D-201ENST00000216099 PPP4R2Q9NY27 417 aa14.01□□□□□ -0.17
APOBEC3D-201ENST00000216099 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
APOBEC3D-201ENST00000216099 FER1L4A9Z1Z3 1794 aa14□□□□□ -0.17
APOBEC3D-201ENST00000216099 POLR3AO14802 1390 aaPredicted RBP14□□□□□ -0.17
APOBEC3D-201ENST00000216099 WDR43Q15061 677 aaKnown RBP eCLIP14□□□□□ -0.17
APOBEC3D-201ENST00000216099 ATAD2Q6PL18 1390 aa14□□□□□ -0.17
APOBEC3D-201ENST00000216099 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.99□□□□□ -0.17
APOBEC3D-201ENST00000216099 FAM117AQ9C073 453 aa13.99□□□□□ -0.17
APOBEC3D-201ENST00000216099 C3P01024 1663 aa13.99□□□□□ -0.17
APOBEC3D-201ENST00000216099 TNRQ92752 1358 aa13.99□□□□□ -0.17
APOBEC3D-201ENST00000216099 ESF1Q9H501 851 aaKnown RBP13.99□□□□□ -0.17
APOBEC3D-201ENST00000216099 MLECQ14165 292 aa13.98□□□□□ -0.17
APOBEC3D-201ENST00000216099 PPM1GO15355 546 aaPredicted RBP13.98□□□□□ -0.17
APOBEC3D-201ENST00000216099 SLC12A5Q9H2X9 1139 aa13.98□□□□□ -0.17
APOBEC3D-201ENST00000216099 ADAMTS8Q9UP79 889 aa13.98□□□□□ -0.17
APOBEC3D-201ENST00000216099 CPS1P31327 1500 aa13.97□□□□□ -0.17
APOBEC3D-201ENST00000216099 MED14O60244 1454 aa13.97□□□□□ -0.17
APOBEC3D-201ENST00000216099 CGNL1Q0VF96 1302 aa13.97□□□□□ -0.17
APOBEC3D-201ENST00000216099 NLRP1Q9C000 1473 aa13.97□□□□□ -0.17
APOBEC3D-201ENST00000216099 ABCC11Q96J66 1382 aa13.96□□□□□ -0.17
APOBEC3D-201ENST00000216099 TECPR2O15040 1411 aa13.95□□□□□ -0.18
APOBEC3D-201ENST00000216099 NGEFQ8N5V2 710 aa13.95□□□□□ -0.18
APOBEC3D-201ENST00000216099 STK26Q9P289 416 aa13.95□□□□□ -0.18
APOBEC3D-201ENST00000216099 HDGFP51858 240 aaKnown RBP13.94□□□□□ -0.18
APOBEC3D-201ENST00000216099 PLCD3Q8N3E9 789 aa13.94□□□□□ -0.18
APOBEC3D-201ENST00000216099 ZFP91Q96JP5 570 aaPredicted RBP13.94□□□□□ -0.18
APOBEC3D-201ENST00000216099 PRAM1Q96QH2 718 aa13.94□□□□□ -0.18
APOBEC3D-201ENST00000216099 CD163L1Q9NR16 1453 aa13.94□□□□□ -0.18
APOBEC3D-201ENST00000216099 TRAK2O60296 914 aa13.94□□□□□ -0.18
APOBEC3D-201ENST00000216099 MORC1Q86VD1 984 aa13.94□□□□□ -0.18
APOBEC3D-201ENST00000216099 POGKQ9P215 609 aa13.93□□□□□ -0.18
APOBEC3D-201ENST00000216099 ZNF521Q96K83 1311 aa13.93□□□□□ -0.18
APOBEC3D-201ENST00000216099 FAM135BQ49AJ0 1406 aa13.93□□□□□ -0.18
APOBEC3D-201ENST00000216099 ATP7BP35670 1465 aa13.93□□□□□ -0.18
APOBEC3D-201ENST00000216099 CABP2Q9NPB3 220 aa13.93□□□□□ -0.18
APOBEC3D-201ENST00000216099 A0A1W2PP64 1363 aa13.93□□□□□ -0.18
APOBEC3D-201ENST00000216099 FBXW7Q969H0 707 aa13.92□□□□□ -0.18
APOBEC3D-201ENST00000216099 SIRT1Q96EB6 747 aa13.92□□□□□ -0.18
APOBEC3D-201ENST00000216099 AKAP12Q02952 1782 aa13.92□□□□□ -0.18
APOBEC3D-201ENST00000216099 RCAN3Q9UKA8 241 aa13.92□□□□□ -0.18
APOBEC3D-201ENST00000216099 TMEM2Q9UHN6 1383 aa13.92□□□□□ -0.18
APOBEC3D-201ENST00000216099 MON2Q7Z3U7 1717 aa13.91□□□□□ -0.18
APOBEC3D-201ENST00000216099 STK25O00506 426 aa13.91□□□□□ -0.18
APOBEC3D-201ENST00000216099 PLEKHH1Q9ULM0 1364 aa13.91□□□□□ -0.18
APOBEC3D-201ENST00000216099 ADGRB2O60241 1585 aa13.91□□□□□ -0.18
APOBEC3D-201ENST00000216099 ITSN1Q15811 1721 aa13.91□□□□□ -0.18
APOBEC3D-201ENST00000216099 ONECUT3O60422 494 aaPredicted RBP13.91□□□□□ -0.18
APOBEC3D-201ENST00000216099 TAF7LQ5H9L4 462 aa13.91□□□□□ -0.18
APOBEC3D-201ENST00000216099 MINK1Q8N4C8 1332 aaPredicted RBP13.9□□□□□ -0.18
APOBEC3D-201ENST00000216099 SRPK2P78362 688 aaKnown RBP13.9□□□□□ -0.18
APOBEC3D-201ENST00000216099 TMED8Q6PL24 325 aaPredicted RBP13.9□□□□□ -0.18
APOBEC3D-201ENST00000216099 TERF2IPQ9NYB0 399 aa13.9□□□□□ -0.18
APOBEC3D-201ENST00000216099 SLIT1O75093 1534 aa13.9□□□□□ -0.18
APOBEC3D-201ENST00000216099 RRP1P56182 461 aaKnown RBP13.9□□□□□ -0.18
APOBEC3D-201ENST00000216099 SENP3-EIF4A1A0A087X0R7 540 aa13.89□□□□□ -0.19
APOBEC3D-201ENST00000216099 IQSEC2Q5JU85 1478 aa13.89□□□□□ -0.19
APOBEC3D-201ENST00000216099 SAFB2Q14151 953 aaKnown RBP eCLIP13.89□□□□□ -0.19
APOBEC3D-201ENST00000216099 CDCA7LQ96GN5 454 aa13.88□□□□□ -0.19
APOBEC3D-201ENST00000216099 BCL11BQ9C0K0 894 aaPredicted RBP13.88□□□□□ -0.19
APOBEC3D-201ENST00000216099 SALL2Q9Y467 1007 aaPredicted RBP13.88□□□□□ -0.19
APOBEC3D-201ENST00000216099 ARHGAP23Q9P227 1491 aa13.88□□□□□ -0.19
APOBEC3D-201ENST00000216099 PLEKHG1Q9ULL1 1385 aa13.88□□□□□ -0.19
APOBEC3D-201ENST00000216099 DIP2AQ14689 1571 aa13.88□□□□□ -0.19
APOBEC3D-201ENST00000216099 CDK19Q9BWU1 502 aa13.88□□□□□ -0.19
APOBEC3D-201ENST00000216099 METP08581 1390 aa13.87□□□□□ -0.19
APOBEC3D-201ENST00000216099 TOPAZ1Q8N9V7 1692 aa13.87□□□□□ -0.19
APOBEC3D-201ENST00000216099 CFAP53Q96M91 514 aa13.87□□□□□ -0.19
APOBEC3D-201ENST00000216099 ADAMTS13Q76LX8 1427 aa13.87□□□□□ -0.19
APOBEC3D-201ENST00000216099 CDC42BPGQ6DT37 1551 aa13.87□□□□□ -0.19
APOBEC3D-201ENST00000216099 COL3A1P02461 1466 aaPredicted RBP13.86□□□□□ -0.19
APOBEC3D-201ENST00000216099 GOLGA2Q08379 1002 aa13.86□□□□□ -0.19
APOBEC3D-201ENST00000216099 HDGFL2Q7Z4V5 671 aaPredicted RBP13.86□□□□□ -0.19
APOBEC3D-201ENST00000216099 TRMT2AQ8IZ69 625 aaKnown RBP13.85□□□□□ -0.19
APOBEC3D-201ENST00000216099 RIMS1Q86UR5 1692 aaKnown RBP13.84□□□□□ -0.19
APOBEC3D-201ENST00000216099 ZNF592Q92610 1267 aa13.84□□□□□ -0.19
APOBEC3D-201ENST00000216099 MAP2P11137 1827 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms