RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 NOL8Q76FK4 1167 aaKnown RBP18.97■□□□□ 0.63
EFNB1-201ENST00000204961 C16orf71Q8IYS4 520 aaPredicted RBP18.97■□□□□ 0.63
EFNB1-201ENST00000204961 NCLP19338 710 aaKnown RBP18.96■□□□□ 0.63
EFNB1-201ENST00000204961 AEBP1Q8IUX7 1158 aa18.95■□□□□ 0.62
EFNB1-201ENST00000204961 NPC1L1Q9UHC9 1359 aa18.95■□□□□ 0.62
EFNB1-201ENST00000204961 SMARCA5O60264 1052 aaPredicted RBP18.95■□□□□ 0.62
EFNB1-201ENST00000204961 FAM69CQ0P6D2 419 aa18.94■□□□□ 0.62
EFNB1-201ENST00000204961 FOXD4L6Q3SYB3 417 aaPredicted RBP18.94■□□□□ 0.62
EFNB1-201ENST00000204961 FOXD4L3Q6VB84 417 aaPredicted RBP18.94■□□□□ 0.62
EFNB1-201ENST00000204961 MCM10Q7L590 875 aa18.94■□□□□ 0.62
EFNB1-201ENST00000204961 MYOM1P52179 1685 aa18.94■□□□□ 0.62
EFNB1-201ENST00000204961 C8orf58Q8NAV2 365 aa18.94■□□□□ 0.62
EFNB1-201ENST00000204961 PLEKHF1Q96S99 279 aa18.94■□□□□ 0.62
EFNB1-201ENST00000204961 ESF1Q9H501 851 aaKnown RBP18.94■□□□□ 0.62
EFNB1-201ENST00000204961 POLKQ9UBT6 870 aa18.94■□□□□ 0.62
EFNB1-201ENST00000204961 RNF17Q9BXT8 1623 aaKnown RBP18.93■□□□□ 0.62
EFNB1-201ENST00000204961 MAP3K4Q9Y6R4 1608 aa18.92■□□□□ 0.62
EFNB1-201ENST00000204961 IPO8O15397 1037 aaKnown RBP18.92■□□□□ 0.62
EFNB1-201ENST00000204961 C14orf37Q86TY3 774 aa18.92■□□□□ 0.62
EFNB1-201ENST00000204961 ANKRD36BQ8N2N9 1353 aa18.92■□□□□ 0.62
EFNB1-201ENST00000204961 TSHZ3Q63HK5 1081 aa18.92■□□□□ 0.62
EFNB1-201ENST00000204961 LTV1Q96GA3 475 aaPredicted RBP18.92■□□□□ 0.62
EFNB1-201ENST00000204961 CEP152O94986 1710 aa18.91■□□□□ 0.62
EFNB1-201ENST00000204961 ZNF518AQ6AHZ1 1483 aa18.91■□□□□ 0.62
EFNB1-201ENST00000204961 CD2BP2O95400 341 aaKnown RBP18.91■□□□□ 0.62
EFNB1-201ENST00000204961 OTUD7AQ8TE49 926 aaPredicted RBP18.9■□□□□ 0.62
EFNB1-201ENST00000204961 MROH2AA6NES4 1674 aa18.9■□□□□ 0.62
EFNB1-201ENST00000204961 DTNBO60941 627 aa18.9■□□□□ 0.62
EFNB1-201ENST00000204961 TWISTNBQ3B726 338 aaPredicted RBP18.9■□□□□ 0.62
EFNB1-201ENST00000204961 CHD1LQ86WJ1 897 aa18.9■□□□□ 0.62
EFNB1-201ENST00000204961 CHAMP1Q96JM3 812 aa18.9■□□□□ 0.62
EFNB1-201ENST00000204961 MBIPQ9NS73 344 aa18.9■□□□□ 0.62
EFNB1-201ENST00000204961 RBM33Q96EV2 1170 aaKnown RBP18.89■□□□□ 0.62
EFNB1-201ENST00000204961 SULT6B1Q6IMI4 303 aa18.89■□□□□ 0.61
EFNB1-201ENST00000204961 YEATS2Q9ULM3 1422 aa18.89■□□□□ 0.61
EFNB1-201ENST00000204961 TRAK2O60296 914 aa18.89■□□□□ 0.61
EFNB1-201ENST00000204961 MCM4P33991 863 aa18.89■□□□□ 0.61
EFNB1-201ENST00000204961 ZBTB40Q9NUA8 1239 aa18.89■□□□□ 0.61
EFNB1-201ENST00000204961 TET3O43151 1660 aa18.88■□□□□ 0.61
EFNB1-201ENST00000204961 KIF1BO60333 1816 aa18.88■□□□□ 0.61
EFNB1-201ENST00000204961 NGEFQ8N5V2 710 aa18.87■□□□□ 0.61
EFNB1-201ENST00000204961 PHF23Q9BUL5 403 aaPredicted RBP18.87■□□□□ 0.61
EFNB1-201ENST00000204961 LAMC1P11047 1609 aa18.87■□□□□ 0.61
EFNB1-201ENST00000204961 PPRC1Q5VV67 1664 aaKnown RBP18.87■□□□□ 0.61
EFNB1-201ENST00000204961 GOLGA6L3A6NEY3 463 aa18.87■□□□□ 0.61
EFNB1-201ENST00000204961 F6X3S4 739 aa18.86■□□□□ 0.61
EFNB1-201ENST00000204961 SLC26A8Q96RN1 970 aa18.86■□□□□ 0.61
EFNB1-201ENST00000204961 ANTXR1Q9H6X2 564 aa18.86■□□□□ 0.61
EFNB1-201ENST00000204961 FOXO3O43524 673 aa18.85■□□□□ 0.61
EFNB1-201ENST00000204961 VAMP4O75379 141 aa18.84■□□□□ 0.61
EFNB1-201ENST00000204961 COG3Q96JB2 828 aa18.84■□□□□ 0.61
EFNB1-201ENST00000204961 XRCC6P12956 609 aaKnown RBP eCLIP18.84■□□□□ 0.61
EFNB1-201ENST00000204961 SHROOM2Q13796 1616 aa18.84■□□□□ 0.61
EFNB1-201ENST00000204961 RRAGDQ9NQL2 400 aaPredicted RBP18.84■□□□□ 0.61
EFNB1-201ENST00000204961 CCDC27Q2M243 656 aa18.83■□□□□ 0.61
EFNB1-201ENST00000204961 NAP1L5Q96NT1 182 aaPredicted RBP18.83■□□□□ 0.61
EFNB1-201ENST00000204961 RSPH6AQ9H0K4 717 aa18.83■□□□□ 0.61
EFNB1-201ENST00000204961 CHMP5Q9NZZ3 219 aa18.83■□□□□ 0.6
EFNB1-201ENST00000204961 EFCAB6Q5THR3 1501 aa18.82■□□□□ 0.6
EFNB1-201ENST00000204961 RPGRIP1LQ68CZ1 1315 aa18.82■□□□□ 0.6
EFNB1-201ENST00000204961 KIF16BQ96L93 1317 aa18.82■□□□□ 0.6
EFNB1-201ENST00000204961 NFE2L2Q16236 605 aa18.82■□□□□ 0.6
EFNB1-201ENST00000204961 TBC1D9Q6ZT07 1266 aa18.82■□□□□ 0.6
EFNB1-201ENST00000204961 CEBPAP49715 358 aaPredicted RBP18.81■□□□□ 0.6
EFNB1-201ENST00000204961 HSP90AB2PQ58FF8 381 aa18.81■□□□□ 0.6
EFNB1-201ENST00000204961 SIRT2Q8IXJ6 389 aa18.81■□□□□ 0.6
EFNB1-201ENST00000204961 UBE2Q2Q8WVN8 375 aa18.81■□□□□ 0.6
EFNB1-201ENST00000204961 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
EFNB1-201ENST00000204961 FCHSD2O94868 740 aa18.8■□□□□ 0.6
EFNB1-201ENST00000204961 SLC52A1Q9NWF4 448 aa18.8■□□□□ 0.6
EFNB1-201ENST00000204961 SSFA2P28290 1259 aa18.8■□□□□ 0.6
EFNB1-201ENST00000204961 SMC5Q8IY18 1101 aa18.8■□□□□ 0.6
EFNB1-201ENST00000204961 TULP4Q9NRJ4 1543 aa18.8■□□□□ 0.6
EFNB1-201ENST00000204961 MYOM2P54296 1465 aa18.79■□□□□ 0.6
EFNB1-201ENST00000204961 ZBTB7BO15156 539 aaPredicted RBP18.79■□□□□ 0.6
EFNB1-201ENST00000204961 NUCB1Q02818 461 aa18.79■□□□□ 0.6
EFNB1-201ENST00000204961 TNPO1Q92973 898 aaKnown RBP18.79■□□□□ 0.6
EFNB1-201ENST00000204961 KIDINS220Q9ULH0 1771 aa18.79■□□□□ 0.6
EFNB1-201ENST00000204961 QRICH2Q9H0J4 1663 aa18.79■□□□□ 0.6
EFNB1-201ENST00000204961 UHRF1BP1LA0JNW5 1464 aa18.78■□□□□ 0.6
EFNB1-201ENST00000204961 MRPL50Q8N5N7 158 aaKnown RBP18.78■□□□□ 0.6
EFNB1-201ENST00000204961 MROH1Q8NDA8 1641 aa18.78■□□□□ 0.6
EFNB1-201ENST00000204961 HDAC1Q13547 482 aaPredicted RBP18.77■□□□□ 0.6
EFNB1-201ENST00000204961 NINLQ9Y2I6 1382 aa18.76■□□□□ 0.59
EFNB1-201ENST00000204961 SLC4A2P04920 1241 aa18.76■□□□□ 0.59
EFNB1-201ENST00000204961 GNAI1P63096 354 aa18.76■□□□□ 0.59
EFNB1-201ENST00000204961 MPNDQ8N594 471 aa18.76■□□□□ 0.59
EFNB1-201ENST00000204961 ABCC11Q96J66 1382 aa18.76■□□□□ 0.59
EFNB1-201ENST00000204961 SBNO2Q9Y2G9 1366 aa18.76■□□□□ 0.59
EFNB1-201ENST00000204961 GAS2L2Q8NHY3 880 aa18.76■□□□□ 0.59
EFNB1-201ENST00000204961 MEIS3Q99687 375 aa18.76■□□□□ 0.59
EFNB1-201ENST00000204961 EXOC6BQ9Y2D4 811 aa18.76■□□□□ 0.59
EFNB1-201ENST00000204961 YTHDC2Q9H6S0 1430 aaKnown RBP18.75■□□□□ 0.59
EFNB1-201ENST00000204961 POGZQ7Z3K3 1410 aa18.75■□□□□ 0.59
EFNB1-201ENST00000204961 PNNQ9H307 717 aaKnown RBP18.75■□□□□ 0.59
EFNB1-201ENST00000204961 MAP4K4O95819 1239 aaPredicted RBP18.74■□□□□ 0.59
EFNB1-201ENST00000204961 PKP1Q13835 747 aa18.74■□□□□ 0.59
EFNB1-201ENST00000204961 INO80Q9ULG1 1556 aaPredicted RBP18.74■□□□□ 0.59
EFNB1-201ENST00000204961 G2E3Q7L622 706 aa18.74■□□□□ 0.59
EFNB1-201ENST00000204961 FAM43AQ8N2R8 423 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms