RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 NBPF8Q3BBV2 869 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 NBPF14Q5TI25 921 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 BCCIPQ9P287 314 aaKnown RBP eCLIP4.1□□□□□ -1.75
NEB-201ENST00000172853 B4DLN1 442 aa4.09□□□□□ -1.75
NEB-201ENST00000172853 MRPL12P52815 198 aaKnown RBP4.09□□□□□ -1.75
NEB-201ENST00000172853 ZNF287Q9HBT7 754 aa4.09□□□□□ -1.75
NEB-201ENST00000172853 SSR1P43307 286 aaKnown RBP4.09□□□□□ -1.75
NEB-201ENST00000172853 HSP90B2PQ58FF3 399 aa4.09□□□□□ -1.75
NEB-201ENST00000172853 PSMD1Q99460 953 aa4.09□□□□□ -1.75
NEB-201ENST00000172853 KMT5BQ4FZB7 885 aa4.09□□□□□ -1.75
NEB-201ENST00000172853 CCDC57Q2TAC2 916 aa4.09□□□□□ -1.75
NEB-201ENST00000172853 CEP63Q96MT8 703 aa4.09□□□□□ -1.75
NEB-201ENST00000172853 GOLGA6L10A6NI86 522 aa4.09□□□□□ -1.75
NEB-201ENST00000172853 SLF2Q8IX21 1173 aa4.09□□□□□ -1.75
NEB-201ENST00000172853 DHX37Q8IY37 1157 aaKnown RBP4.09□□□□□ -1.75
NEB-201ENST00000172853 ZNF526Q8TF50 670 aaPredicted RBP4.09□□□□□ -1.75
NEB-201ENST00000172853 DNAJC2Q99543 621 aaKnown RBP4.09□□□□□ -1.75
NEB-201ENST00000172853 ROCK1Q13464 1354 aa4.09□□□□□ -1.75
NEB-201ENST00000172853 CCDC73Q6ZRK6 1079 aa4.09□□□□□ -1.75
NEB-201ENST00000172853 NEUROD6Q96NK8 337 aa4.09□□□□□ -1.75
NEB-201ENST00000172853 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.09□□□□□ -1.75
NEB-201ENST00000172853 SASS6Q6UVJ0 657 aa4.09□□□□□ -1.76
NEB-201ENST00000172853 UTP14AQ9BVJ6 771 aaKnown RBP4.09□□□□□ -1.76
NEB-201ENST00000172853 MYO1BO43795 1136 aa4.09□□□□□ -1.76
NEB-201ENST00000172853 SH3BP5O60239 455 aa4.09□□□□□ -1.76
NEB-201ENST00000172853 DZIP1LQ8IYY4 767 aaKnown RBP4.09□□□□□ -1.76
NEB-201ENST00000172853 ANO2Q9NQ90 1003 aa4.09□□□□□ -1.76
NEB-201ENST00000172853 NCBP1Q09161 790 aaKnown RBP4.09□□□□□ -1.76
NEB-201ENST00000172853 TSPYL1Q9H0U9 437 aa4.09□□□□□ -1.76
NEB-201ENST00000172853 STRN4Q9NRL3 753 aa4.09□□□□□ -1.76
NEB-201ENST00000172853 PDE4AP27815 886 aa4.09□□□□□ -1.76
NEB-201ENST00000172853 CRACR2BQ8N4Y2 399 aaPredicted RBP4.08□□□□□ -1.76
NEB-201ENST00000172853 MNS1Q8NEH6 495 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 PPP1R12BO60237 982 aaPredicted RBP4.08□□□□□ -1.76
NEB-201ENST00000172853 ERC2O15083 957 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.08□□□□□ -1.76
NEB-201ENST00000172853 NAT10Q9H0A0 1025 aaKnown RBP4.08□□□□□ -1.76
NEB-201ENST00000172853 H0YHG0 523 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 CUL5Q93034 780 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.08□□□□□ -1.76
NEB-201ENST00000172853 V9GYY5 206 aaPredicted RBP4.08□□□□□ -1.76
NEB-201ENST00000172853 CCDC158Q5M9N0 1113 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 SMARCA2P51531 1590 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 POLD1P28340 1107 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 ATP6V1E1P36543 226 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 ARHGEF6Q15052 776 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 CNNM1Q9NRU3 951 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 CCDC89Q8N998 374 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 FAM177BA6PVY3 158 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 PPP1R9BQ96SB3 815 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 POGZQ7Z3K3 1410 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 TANGO6Q9C0B7 1094 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 CCDC14Q49A88 953 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 GOLGA6L10A0A0M3HER8 536 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 PLCD4Q9BRC7 762 aa4.08□□□□□ -1.76
NEB-201ENST00000172853 KTN1Q86UP2 1357 aaKnown RBP4.08□□□□□ -1.76
NEB-201ENST00000172853 ATF7IPQ6VMQ6 1270 aa4.07□□□□□ -1.76
NEB-201ENST00000172853 FAM69CQ0P6D2 419 aa4.07□□□□□ -1.76
NEB-201ENST00000172853 CACYBPQ9HB71 228 aaKnown RBP4.07□□□□□ -1.76
NEB-201ENST00000172853 CEP162Q5TB80 1403 aa4.07□□□□□ -1.76
NEB-201ENST00000172853 TATP17735 454 aaPredicted RBP4.07□□□□□ -1.76
NEB-201ENST00000172853 DACH1Q9UI36 760 aa4.07□□□□□ -1.76
NEB-201ENST00000172853 GPRASP1Q5JY77 1395 aa4.07□□□□□ -1.76
NEB-201ENST00000172853 CEP135Q66GS9 1140 aa4.07□□□□□ -1.76
NEB-201ENST00000172853 NDC80O14777 642 aa4.07□□□□□ -1.76
NEB-201ENST00000172853 NACAP1Q9BZK3 213 aa4.07□□□□□ -1.76
NEB-201ENST00000172853 SKIDA1Q1XH10 827 aa4.07□□□□□ -1.76
NEB-201ENST00000172853 HNRNPMP52272 730 aaKnown RBP eCLIP4.07□□□□□ -1.76
NEB-201ENST00000172853 NOL7Q9UMY1 257 aaKnown RBP4.07□□□□□ -1.76
NEB-201ENST00000172853 HOOK3Q86VS8 718 aa4.07□□□□□ -1.76
NEB-201ENST00000172853 SREK1Q8WXA9 508 aaKnown RBP4.07□□□□□ -1.76
NEB-201ENST00000172853 NLRP2Q9NX02 1062 aa4.07□□□□□ -1.76
NEB-201ENST00000172853 CCP110O43303 1012 aa4.07□□□□□ -1.76
NEB-201ENST00000172853 ZNF652Q9Y2D9 606 aa4.07□□□□□ -1.76
NEB-201ENST00000172853 VGFO15240 615 aaPredicted RBP4.07□□□□□ -1.76
NEB-201ENST00000172853 BICD2Q8TD16 824 aa4.07□□□□□ -1.76
NEB-201ENST00000172853 SMG6Q86US8 1419 aaKnown RBP4.07□□□□□ -1.76
NEB-201ENST00000172853 ZNF354CQ86Y25 554 aa4.07□□□□□ -1.76
NEB-201ENST00000172853 ERLIN1O75477 346 aa4.07□□□□□ -1.76
NEB-201ENST00000172853 PLEKHO1Q53GL0 409 aaPredicted RBP4.07□□□□□ -1.76
NEB-201ENST00000172853 GZF1Q9H116 711 aaPredicted RBP4.07□□□□□ -1.76
NEB-201ENST00000172853 LMOD1P29536 600 aaPredicted RBP4.07□□□□□ -1.76
NEB-201ENST00000172853 TTC21AQ8NDW8 1320 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 ZNF592Q92610 1267 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 TTC39AQ5SRH9 613 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 COG6Q9Y2V7 657 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 ZPR1O75312 459 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 NUCB2P80303 420 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 GSE1Q14687 1217 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 ROCK2O75116 1388 aaKnown RBP4.06□□□□□ -1.76
NEB-201ENST00000172853 PDIA4P13667 645 aaKnown RBP4.06□□□□□ -1.76
NEB-201ENST00000172853 CCDC39Q9UFE4 941 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 UACAQ9BZF9 1416 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 DHX8Q14562 1220 aaKnown RBP4.06□□□□□ -1.76
NEB-201ENST00000172853 SLC26A8Q96RN1 970 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 NINLQ9Y2I6 1382 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 XRCC6P12956 609 aaKnown RBP eCLIP4.06□□□□□ -1.76
NEB-201ENST00000172853 PROSER2Q86WR7 435 aaPredicted RBP4.06□□□□□ -1.76
NEB-201ENST00000172853 CCDC69A6NI79 296 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 SNX16P57768 344 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms