RNA–Protein interactions for RNA: ENST00000034275.12

RANBP3-201, Transcript of RAN binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RANBP3, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-201ENST00000034275 GGNBP2Q9H3C7 697 aa22.83■■□□□ 1.24
RANBP3-201ENST00000034275 TTC21AQ8NDW8 1320 aa22.8■■□□□ 1.24
RANBP3-201ENST00000034275 BRD4O60885 1362 aaPredicted RBP22.8■■□□□ 1.24
RANBP3-201ENST00000034275 NME9Q86XW9 330 aa22.79■■□□□ 1.24
RANBP3-201ENST00000034275 SSH2Q76I76 1423 aa22.79■■□□□ 1.24
RANBP3-201ENST00000034275 PAK3O75914 559 aaPredicted RBP22.78■■□□□ 1.24
RANBP3-201ENST00000034275 KIF1AQ12756 1690 aa22.78■■□□□ 1.24
RANBP3-201ENST00000034275 NLRP13Q86W25 1043 aa22.78■■□□□ 1.24
RANBP3-201ENST00000034275 COG3Q96JB2 828 aa22.77■■□□□ 1.24
RANBP3-201ENST00000034275 PPP2R1AP30153 589 aa22.76■■□□□ 1.23
RANBP3-201ENST00000034275 TNNT2P45379 298 aaPredicted RBP22.76■■□□□ 1.23
RANBP3-201ENST00000034275 BRINP3Q76B58 766 aa22.76■■□□□ 1.23
RANBP3-201ENST00000034275 KRT28Q7Z3Y7 464 aa22.76■■□□□ 1.23
RANBP3-201ENST00000034275 NPHP3Q7Z494 1330 aa22.75■■□□□ 1.23
RANBP3-201ENST00000034275 KIF20BQ96Q89 1820 aa22.75■■□□□ 1.23
RANBP3-201ENST00000034275 ABTB2Q8N961 1025 aa22.75■■□□□ 1.23
RANBP3-201ENST00000034275 MRS2Q9HD23 443 aa22.75■■□□□ 1.23
RANBP3-201ENST00000034275 NRKQ7Z2Y5 1582 aa22.74■■□□□ 1.23
RANBP3-201ENST00000034275 XPCQ01831 940 aaPredicted RBP22.73■■□□□ 1.23
RANBP3-201ENST00000034275 ZRANB1Q9UGI0 708 aa22.73■■□□□ 1.23
RANBP3-201ENST00000034275 CCDC184Q52MB2 194 aa22.72■■□□□ 1.23
RANBP3-201ENST00000034275 ANKRD26Q9UPS8 1709 aa22.71■■□□□ 1.23
RANBP3-201ENST00000034275 TOM1O60784 492 aa22.71■■□□□ 1.23
RANBP3-201ENST00000034275 NLRP6P59044 892 aa22.71■■□□□ 1.23
RANBP3-201ENST00000034275 DDX17Q92841 729 aaKnown RBP22.7■■□□□ 1.22
RANBP3-201ENST00000034275 SCAF1Q9H7N4 1312 aaKnown RBP22.69■■□□□ 1.22
RANBP3-201ENST00000034275 USP31Q70CQ4 1352 aa22.68■■□□□ 1.22
RANBP3-201ENST00000034275 LMOD2Q6P5Q4 547 aa22.68■■□□□ 1.22
RANBP3-201ENST00000034275 NUTM2GQ5VZR2 741 aa22.67■■□□□ 1.22
RANBP3-201ENST00000034275 MTHFSP49914 203 aa22.66■■□□□ 1.22
RANBP3-201ENST00000034275 CERKQ8TCT0 537 aa22.66■■□□□ 1.22
RANBP3-201ENST00000034275 OVOS2A0A0J9YW53 1432 aa22.66■■□□□ 1.22
RANBP3-201ENST00000034275 OVOS2Q6IE36 1432 aa22.66■■□□□ 1.22
RANBP3-201ENST00000034275 SBNO1A3KN83 1393 aa22.65■■□□□ 1.22
RANBP3-201ENST00000034275 PIK3C2AO00443 1686 aa22.64■■□□□ 1.21
RANBP3-201ENST00000034275 IQSEC2Q5JU85 1478 aa22.63■■□□□ 1.21
RANBP3-201ENST00000034275 AATKQ6ZMQ8 1374 aa22.63■■□□□ 1.21
RANBP3-201ENST00000034275 SOS2Q07890 1332 aaPredicted RBP22.62■■□□□ 1.21
RANBP3-201ENST00000034275 UBAP1LF5GYI3 381 aa22.62■■□□□ 1.21
RANBP3-201ENST00000034275 FBLN1P23142 703 aa22.62■■□□□ 1.21
RANBP3-201ENST00000034275 CFAP53Q96M91 514 aa22.62■■□□□ 1.21
RANBP3-201ENST00000034275 PXDNQ92626 1479 aa22.61■■□□□ 1.21
RANBP3-201ENST00000034275 PNISRQ8TF01 805 aaKnown RBP22.61■■□□□ 1.21
RANBP3-201ENST00000034275 POLKQ9UBT6 870 aa22.61■■□□□ 1.21
RANBP3-201ENST00000034275 TRPM3Q9HCF6 1732 aaPredicted RBP22.61■■□□□ 1.21
RANBP3-201ENST00000034275 FAM9BQ8IZU0 186 aa22.61■■□□□ 1.21
RANBP3-201ENST00000034275 SPATA31A3Q5VYP0 1347 aa22.6■■□□□ 1.21
RANBP3-201ENST00000034275 PPM1GO15355 546 aaPredicted RBP22.6■■□□□ 1.21
RANBP3-201ENST00000034275 SOX12O15370 315 aa22.6■■□□□ 1.21
RANBP3-201ENST00000034275 PIP4K2BP78356 416 aa22.59■■□□□ 1.21
RANBP3-201ENST00000034275 KCNH5Q8NCM2 988 aa22.59■■□□□ 1.21
RANBP3-201ENST00000034275 MAP2P11137 1827 aaKnown RBP22.58■■□□□ 1.21
RANBP3-201ENST00000034275 ROBO1Q9Y6N7 1651 aa22.58■■□□□ 1.21
RANBP3-201ENST00000034275 TNS3Q68CZ2 1445 aa22.57■■□□□ 1.2
RANBP3-201ENST00000034275 RRS1Q15050 365 aaKnown RBP22.57■■□□□ 1.2
RANBP3-201ENST00000034275 ARHGEF10O15013 1369 aa22.57■■□□□ 1.2
RANBP3-201ENST00000034275 USP54Q70EL1 1684 aa22.56■■□□□ 1.2
RANBP3-201ENST00000034275 NHSL1Q5SYE7 1610 aa22.56■■□□□ 1.2
RANBP3-201ENST00000034275 EMILIN1Q9Y6C2 1016 aa22.55■■□□□ 1.2
RANBP3-201ENST00000034275 ALS2Q96Q42 1657 aa22.55■■□□□ 1.2
RANBP3-201ENST00000034275 GCP02774 474 aa22.55■■□□□ 1.2
RANBP3-201ENST00000034275 WDR43Q15061 677 aaKnown RBP eCLIP22.54■■□□□ 1.2
RANBP3-201ENST00000034275 LRRC59Q96AG4 307 aaKnown RBP22.54■■□□□ 1.2
RANBP3-201ENST00000034275 PLEKHG5O94827 1062 aa22.53■■□□□ 1.2
RANBP3-201ENST00000034275 MARF1Q9Y4F3 1742 aaKnown RBP22.52■■□□□ 1.2
RANBP3-201ENST00000034275 PNPLA6Q8IY17 1366 aa22.52■■□□□ 1.2
RANBP3-201ENST00000034275 USP19O94966 1318 aa22.52■■□□□ 1.2
RANBP3-201ENST00000034275 YTHDC1Q96MU7 727 aaKnown RBP22.52■■□□□ 1.2
RANBP3-201ENST00000034275 MAP3K19Q56UN5 1328 aa22.51■■□□□ 1.19
RANBP3-201ENST00000034275 AMPHP49418 695 aa22.51■■□□□ 1.19
RANBP3-201ENST00000034275 NUDCQ9Y266 331 aa22.5■■□□□ 1.19
RANBP3-201ENST00000034275 SMG6Q86US8 1419 aaKnown RBP22.5■■□□□ 1.19
RANBP3-201ENST00000034275 INSRP06213 1382 aa22.5■■□□□ 1.19
RANBP3-201ENST00000034275 DIAPH1O60610 1272 aaKnown RBP22.5■■□□□ 1.19
RANBP3-201ENST00000034275 AHDC1Q5TGY3 1603 aaPredicted RBP22.49■■□□□ 1.19
RANBP3-201ENST00000034275 ADAMTS8Q9UP79 889 aa22.48■■□□□ 1.19
RANBP3-201ENST00000034275 KIF24Q5T7B8 1368 aa22.48■■□□□ 1.19
RANBP3-201ENST00000034275 CDK12Q9NYV4 1490 aaPredicted RBP22.48■■□□□ 1.19
RANBP3-201ENST00000034275 CABLES1Q8TDN4 633 aa22.48■■□□□ 1.19
RANBP3-201ENST00000034275 SLIT3O75094 1523 aa22.47■■□□□ 1.19
RANBP3-201ENST00000034275 HSP90AB2PQ58FF8 381 aa22.45■■□□□ 1.19
RANBP3-201ENST00000034275 FLT4P35916 1363 aa22.45■■□□□ 1.18
RANBP3-201ENST00000034275 HAP1P54257 671 aaPredicted RBP22.45■■□□□ 1.18
RANBP3-201ENST00000034275 ARHGEF25Q86VW2 580 aa22.45■■□□□ 1.18
RANBP3-201ENST00000034275 NFAT5O94916 1531 aa22.44■■□□□ 1.18
RANBP3-201ENST00000034275 ZC3H6P61129 1189 aaKnown RBP22.44■■□□□ 1.18
RANBP3-201ENST00000034275 MED1Q15648 1581 aaPredicted RBP22.44■■□□□ 1.18
RANBP3-201ENST00000034275 ZBTB7CA1YPR0 619 aa22.43■■□□□ 1.18
RANBP3-201ENST00000034275 U2SURPO15042 1029 aaKnown RBP22.43■■□□□ 1.18
RANBP3-201ENST00000034275 HOXC9P31274 260 aa22.43■■□□□ 1.18
RANBP3-201ENST00000034275 COL3A1P02461 1466 aaPredicted RBP22.43■■□□□ 1.18
RANBP3-201ENST00000034275 PHLPP1O60346 1717 aa22.43■■□□□ 1.18
RANBP3-201ENST00000034275 U2AF1L5P0DN76 240 aaPredicted RBP22.43■■□□□ 1.18
RANBP3-201ENST00000034275 U2AF1Q01081 240 aaKnown RBP eCLIP22.43■■□□□ 1.18
RANBP3-201ENST00000034275 IP6K1Q92551 441 aa22.43■■□□□ 1.18
RANBP3-201ENST00000034275 IL13P35225 146 aa22.42■■□□□ 1.18
RANBP3-201ENST00000034275 RTL1A6NKG5 1358 aa22.41■■□□□ 1.18
RANBP3-201ENST00000034275 LTN1O94822 1766 aa22.4■■□□□ 1.18
RANBP3-201ENST00000034275 HNRNPUQ00839 825 aaKnown RBP eCLIP22.4■■□□□ 1.18
RANBP3-201ENST00000034275 PEAK1Q9H792 1746 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms