RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 CABP2Q9NPB3 220 aa35.55■■■■□ 3.28
TSR3-201ENST00000007390 PPIP5K1Q6PFW1 1433 aa35.55■■■■□ 3.28
TSR3-201ENST00000007390 EVC2Q86UK5 1308 aa35.54■■■■□ 3.28
TSR3-201ENST00000007390 PAK3O75914 559 aaPredicted RBP35.53■■■■□ 3.28
TSR3-201ENST00000007390 PLEKHG5O94827 1062 aa35.51■■■■□ 3.28
TSR3-201ENST00000007390 UNC5CLQ8IV45 518 aa35.51■■■■□ 3.28
TSR3-201ENST00000007390 CRYBG1Q9Y4K1 1723 aa35.5■■■■□ 3.27
TSR3-201ENST00000007390 CARD11Q9BXL7 1154 aa35.5■■■■□ 3.27
TSR3-201ENST00000007390 SBNO2Q9Y2G9 1366 aa35.5■■■■□ 3.27
TSR3-201ENST00000007390 NWD2Q9ULI1 1742 aa35.47■■■■□ 3.27
TSR3-201ENST00000007390 PLCH1Q4KWH8 1693 aa35.46■■■■□ 3.27
TSR3-201ENST00000007390 GJD4Q96KN9 370 aaPredicted RBP35.45■■■■□ 3.27
TSR3-201ENST00000007390 BRD4O60885 1362 aaPredicted RBP35.45■■■■□ 3.27
TSR3-201ENST00000007390 FAM83GA6ND36 823 aa35.43■■■■□ 3.26
TSR3-201ENST00000007390 CABP1Q9NZU7 370 aa35.43■■■■□ 3.26
TSR3-201ENST00000007390 CLSPNQ9HAW4 1339 aa35.39■■■■□ 3.26
TSR3-201ENST00000007390 COL14A1Q05707 1796 aaKnown RBP35.39■■■■□ 3.26
TSR3-201ENST00000007390 GLI3P10071 1580 aa35.38■■■■□ 3.25
TSR3-201ENST00000007390 VPS72Q15906 364 aa35.38■■■■□ 3.25
TSR3-201ENST00000007390 UPF1Q92900 1129 aaKnown RBP eCLIP35.38■■■■□ 3.25
TSR3-201ENST00000007390 PHRF1Q9P1Y6 1649 aaKnown RBP35.38■■■■□ 3.25
TSR3-201ENST00000007390 USP6P35125 1406 aa35.38■■■■□ 3.25
TSR3-201ENST00000007390 ATAD2Q6PL18 1390 aa35.38■■■■□ 3.25
TSR3-201ENST00000007390 ABTB2Q8N961 1025 aa35.35■■■■□ 3.25
TSR3-201ENST00000007390 PCGF6Q9BYE7 350 aa35.35■■■■□ 3.25
TSR3-201ENST00000007390 NRAPQ86VF7 1730 aa35.34■■■■□ 3.25
TSR3-201ENST00000007390 USP19O94966 1318 aa35.33■■■■□ 3.25
TSR3-201ENST00000007390 NUTM2GQ5VZR2 741 aa35.33■■■■□ 3.25
TSR3-201ENST00000007390 SSH2Q76I76 1423 aa35.32■■■■□ 3.25
TSR3-201ENST00000007390 PRDM11Q9NQV5 511 aa35.32■■■■□ 3.24
TSR3-201ENST00000007390 BTG4Q9NY30 223 aa35.32■■■■□ 3.24
TSR3-201ENST00000007390 KIAA0232Q92628 1395 aa35.3■■■■□ 3.24
TSR3-201ENST00000007390 TIMELESSQ9UNS1 1208 aa35.3■■■■□ 3.24
TSR3-201ENST00000007390 NRKQ7Z2Y5 1582 aa35.3■■■■□ 3.24
TSR3-201ENST00000007390 NLRP13Q86W25 1043 aa35.29■■■■□ 3.24
TSR3-201ENST00000007390 ZNF692Q9BU19 519 aaPredicted RBP35.28■■■■□ 3.24
TSR3-201ENST00000007390 CPSF1Q10570 1443 aaKnown RBP35.26■■■■□ 3.24
TSR3-201ENST00000007390 CPDO75976 1380 aa35.25■■■■□ 3.23
TSR3-201ENST00000007390 AKAP12Q02952 1782 aa35.24■■■■□ 3.23
TSR3-201ENST00000007390 CCDC9Q9Y3X0 531 aaKnown RBP35.24■■■■□ 3.23
TSR3-201ENST00000007390 ONECUT3O60422 494 aaPredicted RBP35.23■■■■□ 3.23
TSR3-201ENST00000007390 ZC3H6P61129 1189 aaKnown RBP35.22■■■■□ 3.23
TSR3-201ENST00000007390 PUS7Q96PZ0 661 aaKnown RBP35.22■■■■□ 3.23
TSR3-201ENST00000007390 EP400Q96L91 3159 aa35.21■■■■□ 3.23
TSR3-201ENST00000007390 TESK2Q96S53 571 aa35.21■■■■□ 3.23
TSR3-201ENST00000007390 PIK3C2AO00443 1686 aa35.2■■■■□ 3.23
TSR3-201ENST00000007390 ST20-MTHFSA0A0A6YYL1 179 aa35.19■■■■□ 3.22
TSR3-201ENST00000007390 SLIT3O75094 1523 aa35.19■■■■□ 3.22
TSR3-201ENST00000007390 GCP02774 474 aa35.19■■■■□ 3.22
TSR3-201ENST00000007390 CHRNA2Q15822 529 aa35.19■■■■□ 3.22
TSR3-201ENST00000007390 TTC21BQ7Z4L5 1316 aa35.19■■■■□ 3.22
TSR3-201ENST00000007390 SLC24A1O60721 1099 aa35.18■■■■□ 3.22
TSR3-201ENST00000007390 NLRP6P59044 892 aa35.18■■■■□ 3.22
TSR3-201ENST00000007390 KTN1Q86UP2 1357 aaKnown RBP35.17■■■■□ 3.22
TSR3-201ENST00000007390 TTC21AQ8NDW8 1320 aa35.17■■■■□ 3.22
TSR3-201ENST00000007390 SEPT12Q8IYM1 358 aa35.17■■■■□ 3.22
TSR3-201ENST00000007390 SPATA31A5Q5VU36 1347 aa35.16■■■■□ 3.22
TSR3-201ENST00000007390 SPATA31A7Q8IWB4 1347 aa35.16■■■■□ 3.22
TSR3-201ENST00000007390 CD163L1Q9NR16 1453 aa35.15■■■■□ 3.22
TSR3-201ENST00000007390 MON2Q7Z3U7 1717 aa35.15■■■■□ 3.22
TSR3-201ENST00000007390 LMO7Q8WWI1 1683 aa35.14■■■■□ 3.22
TSR3-201ENST00000007390 USP47Q96K76 1375 aa35.13■■■■□ 3.21
TSR3-201ENST00000007390 CAMTA1Q9Y6Y1 1673 aa35.11■■■■□ 3.21
TSR3-201ENST00000007390 BRWD3Q6RI45 1802 aa35.1■■■■□ 3.21
TSR3-201ENST00000007390 FAM98CQ17RN3 349 aaKnown RBP35.09■■■■□ 3.21
TSR3-201ENST00000007390 TMC1Q8TDI8 760 aa35.09■■■■□ 3.21
TSR3-201ENST00000007390 SLC12A5Q9H2X9 1139 aa35.09■■■■□ 3.21
TSR3-201ENST00000007390 NINLQ9Y2I6 1382 aa35.08■■■■□ 3.21
TSR3-201ENST00000007390 SPATA31A1Q5TZJ5 1347 aa35.07■■■■□ 3.21
TSR3-201ENST00000007390 STRN4Q9NRL3 753 aa35.07■■■■□ 3.2
TSR3-201ENST00000007390 HDGFL2Q7Z4V5 671 aaPredicted RBP35.06■■■■□ 3.2
TSR3-201ENST00000007390 AATKQ6ZMQ8 1374 aa35.05■■■■□ 3.2
TSR3-201ENST00000007390 CCER1Q8TC90 406 aaPredicted RBP35.05■■■■□ 3.2
TSR3-201ENST00000007390 TERF2IPQ9NYB0 399 aa35.05■■■■□ 3.2
TSR3-201ENST00000007390 KRT27Q7Z3Y8 459 aa35.04■■■■□ 3.2
TSR3-201ENST00000007390 CCDC125Q86Z20 511 aa35.04■■■■□ 3.2
TSR3-201ENST00000007390 THSD7AQ9UPZ6 1657 aa35.04■■■■□ 3.2
TSR3-201ENST00000007390 EVA1CP58658 441 aa35.03■■■■□ 3.2
TSR3-201ENST00000007390 KCNH5Q8NCM2 988 aa35.03■■■■□ 3.2
TSR3-201ENST00000007390 EDC4Q6P2E9 1401 aaKnown RBP35.03■■■■□ 3.2
TSR3-201ENST00000007390 A0A1W2PP64 1363 aa35.02■■■■□ 3.2
TSR3-201ENST00000007390 USP31Q70CQ4 1352 aa35.02■■■■□ 3.2
TSR3-201ENST00000007390 A0A0G2JS52 829 aa35.02■■■■□ 3.2
TSR3-201ENST00000007390 MYT1Q01538 1121 aa35.02■■■■□ 3.2
TSR3-201ENST00000007390 COL5A2P05997 1499 aaPredicted RBP35.02■■■■□ 3.2
TSR3-201ENST00000007390 USP54Q70EL1 1684 aa35.01■■■■□ 3.19
TSR3-201ENST00000007390 TMF1P82094 1093 aa34.99■■■■□ 3.19
TSR3-201ENST00000007390 NFAT5O94916 1531 aa34.98■■■■□ 3.19
TSR3-201ENST00000007390 LARP1Q6PKG0 1096 aaKnown RBP34.98■■■■□ 3.19
TSR3-201ENST00000007390 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.98■■■■□ 3.19
TSR3-201ENST00000007390 ARHGEF25Q86VW2 580 aa34.97■■■■□ 3.19
TSR3-201ENST00000007390 BLMP54132 1417 aaPredicted RBP34.97■■■■□ 3.19
TSR3-201ENST00000007390 COL18A1P39060 1754 aa34.96■■■■□ 3.19
TSR3-201ENST00000007390 BARGINQ6ZT62 677 aa34.95■■■■□ 3.19
TSR3-201ENST00000007390 NME9Q86XW9 330 aa34.95■■■■□ 3.19
TSR3-201ENST00000007390 ZBTB7CA1YPR0 619 aa34.94■■■■□ 3.18
TSR3-201ENST00000007390 ZRANB1Q9UGI0 708 aa34.93■■■■□ 3.18
TSR3-201ENST00000007390 CRB1P82279 1406 aa34.91■■■■□ 3.18
TSR3-201ENST00000007390 CDCA8Q53HL2 280 aa34.91■■■■□ 3.18
TSR3-201ENST00000007390 TCP11L2Q8N4U5 519 aa34.91■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms