RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Smc3Q9CW03 1217 aaKnown RBP11.12□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Ccdc171E9Q1U1 1324 aa11.12□□□□□ -0.63
Scn8a-213ENSMUST00000201549 MpripP97434 1024 aa11.11□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Sycp1Q62209 993 aa11.11□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Odf2A3KGV1 830 aaKnown RBP11.11□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Tfip11Q9ERA6 838 aaKnown RBP11.11□□□□□ -0.63
Scn8a-213ENSMUST00000201549 BC005561E9Q5E2 1589 aa11.11□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Arid3aQ62431 601 aa11.11□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Maco1Q7TQE6 664 aaKnown RBP11.11□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Smc5Q8CG46 1101 aaKnown RBP11.11□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Rfx7F8VPJ6 1459 aa11.11□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Plb1Q3TTY0 1478 aa11.11□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Bcl2l13P59017 434 aa11.11□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Nap1l1P28656 391 aaKnown RBP11.1□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Bicd2Q921C5 820 aa11.1□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Kank1E9Q238 1360 aa11.1□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Gabpb2P81069 414 aa11.09□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Mrvi1Q9WUX5 899 aaKnown RBP11.09□□□□□ -0.63
Scn8a-213ENSMUST00000201549 BcanQ61361 883 aa11.09□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Zmym4A2A791 1549 aaKnown RBP11.09□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Neurod6P48986 337 aa11.09□□□□□ -0.63
Scn8a-213ENSMUST00000201549 Ddx11Q6AXC6 880 aa11.08□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Dixdc1Q80Y83 711 aa11.08□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Pik3c2gO70167 1506 aa11.08□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Fam163aQ8CAA5 168 aa11.08□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Phf14Q9D4H9 881 aa11.08□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Gm21969J3QJZ1 289 aa11.08□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Rbm19Q8R3C6 952 aaKnown RBP11.08□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Magi1Q6RHR9 1471 aa11.08□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Ccp110Q7TSH4 1004 aa11.08□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Tpm4Q6IRU2 248 aa11.08□□□□□ -0.64
Scn8a-213ENSMUST00000201549 PalmQ9Z0P4 383 aa11.08□□□□□ -0.64
Scn8a-213ENSMUST00000201549 WizO88286 1684 aaKnown RBP11.07□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Cfdp1O88271 295 aaKnown RBP11.07□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Cdk19Q8BWD8 501 aa11.07□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Gpatch8A2A6A1 1505 aa11.07□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Rrp9Q91WM3 475 aaKnown RBP11.07□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Trap1aP19473 224 aa11.07□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Polr3aB2RXC6 1390 aa11.07□□□□□ -0.64
Scn8a-213ENSMUST00000201549 1700010I14RikQ7TPG0 532 aa11.06□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Erich3F6QRE9 1637 aa11.06□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Cdc37l1Q9CZP7 335 aa11.06□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Gm1043A0A140LJC2 1431 aa11.06□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Camsap2Q8C1B1 1461 aa11.06□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Zkscan1Q8BGS3 561 aaKnown RBP11.06□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Grin2aP35436 1464 aa11.05□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Skap1Q3UUV5 355 aa11.05□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Zrsr2Q62377 462 aaKnown RBP11.05□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Gprasp1Q5U4C1 1347 aa11.05□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Abl1P00520 1123 aa11.05□□□□□ -0.64
Scn8a-213ENSMUST00000201549 CarsQ9ER72 831 aaKnown RBP11.05□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Ggnbp2Q5SV77 696 aa11.05□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Hnrnpul1Q8VDM6 859 aaKnown RBP11.05□□□□□ -0.64
Scn8a-213ENSMUST00000201549 FanciQ8K368 1330 aa11.05□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Mrc2Q64449 1479 aa11.04□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Pnmal2G3X9N3 661 aa11.04□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Sugp2Q8CH09 1067 aa11.04□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Psmd1Q3TXS7 953 aa11.04□□□□□ -0.64
Scn8a-213ENSMUST00000201549 March6Q6ZQ89 909 aa11.04□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Mphosph10Q810V0 681 aaKnown RBP11.04□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Q4VA45 678 aa11.04□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Gtf2a1Q99PM3 378 aa11.04□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Zkscan2G3X952 960 aa11.04□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Tex19.1Q99MV2 351 aa11.03□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Samd9lQ69Z37 1561 aa11.03□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Gtf2f1Q3THK3 508 aaKnown RBP11.03□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Smarca5Q91ZW3 1051 aaKnown RBP11.03□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Taf3Q5HZG4 932 aa11.03□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Erc2Q6PH08 957 aa11.03□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Rab11fip3Q8CHD8 1047 aa11.03□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Tpm2P58774 284 aa11.03□□□□□ -0.64
Scn8a-213ENSMUST00000201549 NexnQ7TPW1 607 aa11.03□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Jakmip1Q8BVL9 626 aa11.03□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Mcm2P97310 904 aa11.02□□□□□ -0.64
Scn8a-213ENSMUST00000201549 MvpQ9EQK5 861 aa11.02□□□□□ -0.64
Scn8a-213ENSMUST00000201549 Gnai2P08752 355 aaKnown RBP11.02□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Fam135aQ6NS59 1506 aa11.02□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Cwc27Q3TKY6 469 aa11.02□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Cpa2Q504N0 417 aa11.02□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Map4k4P97820 1233 aaKnown RBP11.02□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Rnf20Q5DTM8 973 aa11.02□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Ints3Q7TPD0 1041 aaKnown RBP11.02□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Commd10Q8JZY2 202 aa11.02□□□□□ -0.65
Scn8a-213ENSMUST00000201549 TnnQ80Z71 1560 aa11.02□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Olfml1Q8BSH2 233 aa11.02□□□□□ -0.65
Scn8a-213ENSMUST00000201549 AnlnQ8K298 1121 aaKnown RBP11.02□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Ccdc47Q9D024 483 aaKnown RBP11.02□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Gcc1Q9D4H2 778 aa11.02□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Srgap3Q812A2 1099 aa11.01□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Nphp1Q9QY53 687 aa11.01□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Neo1P97798 1493 aa11.01□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Ppp1r9bQ6R891 817 aaKnown RBP11.01□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Ncoa3O09000 1398 aa11.01□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Eva1cP58659 440 aa11.01□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Ccdc173A0JLY1 547 aa11.01□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Znf697Q569E7 569 aa11.01□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Fmnl2A2APV2 1086 aa11.01□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Cyb5rlB1AS42 316 aa11.01□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Hook1Q8BIL5 728 aa11□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Mcm4P49717 862 aa11□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 37.4 ms