RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Plcd4Q8K3R3 807 aa18.53■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 Cwc15Q9JHS9 229 aaKnown RBP18.53■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 IbtkQ6ZPR6 1352 aaKnown RBP18.52■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 Gm10471E9Q1C7 252 aa18.52■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Ccdc141E9Q8Q6 1531 aa18.52■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Slc52a2Q9D8F3 450 aa18.51■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Fgd6Q69ZL1 1399 aa18.51■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Fam184aE9PW83 1143 aa18.51■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Gtf2a1Q99PM3 378 aa18.51■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Rbm28Q8CGC6 750 aaKnown RBP18.5■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Stk38Q91VJ4 465 aa18.5■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 HmmrQ00547 794 aaKnown RBP18.5■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Zpr1Q62384 459 aa18.5■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Sos1Q62245 1319 aa18.5■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Hs1bp3Q3TC93 395 aa18.5■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Ssh1Q76I79 1042 aa18.5■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Noc3lQ8VI84 807 aaKnown RBP18.5■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Tmco3Q8BH01 678 aa18.5■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Asxl1P59598 1514 aa18.5■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Bcl2l13P59017 434 aa18.49■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 PrxO55103 1391 aa18.49■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Wwc1Q5SXA9 1104 aa18.49■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 MvpQ9EQK5 861 aa18.49■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Stard3nlQ9DCI3 235 aa18.49■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 MpripP97434 1024 aa18.49■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Fam193aQ8CGI1 1231 aaKnown RBP18.49■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Chaf1aQ9QWF0 911 aa18.49■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Arid4aF8VPQ2 1261 aaKnown RBP18.48■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Map4k4P97820 1233 aaKnown RBP18.48■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Cdc37l1Q9CZP7 335 aa18.48■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 PrkcshO08795 521 aa18.48■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 CarsQ9ER72 831 aaKnown RBP18.48■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Olfml1Q8BSH2 233 aa18.48■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Fmnl2A2APV2 1086 aa18.47■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Pip4k2aO70172 405 aa18.47■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Cdk19Q8BWD8 501 aa18.47■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Gimap6Q8K349 305 aa18.47■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Med4Q9CQA5 270 aa18.47■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 TnmdQ9EP64 317 aa18.47■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Krt85Q9Z2T6 507 aa18.47■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Naip2Q9QUK4 1447 aa18.47■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Gtf2f1Q3THK3 508 aaKnown RBP18.47■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Atf3Q60765 181 aa18.47■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Jakmip1Q8BVL9 626 aa18.47■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Kif20aP97329 887 aa18.47■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Cabp2Q9JLK4 216 aa18.47■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Prl7d1P04769 244 aa18.47■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 BcanQ61361 883 aa18.47■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Ipo4Q8VI75 1082 aa18.47■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 EprsQ8CGC7 1512 aaKnown RBP18.47■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Stk11ipQ3TAA7 1072 aa18.46■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Agtpbp1Q641K1 1218 aa18.46■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Cep57l1Q8VDS7 400 aa18.46■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Sirt1Q923E4 737 aa18.46■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Samd1D3YXK1 519 aa18.46■□□□□ 0.55
Pcdha9-201ENSMUST00000115659 Eva1cP58659 440 aa18.45■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Cwc27Q3TKY6 469 aa18.45■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Cnnm3Q32NY4 713 aa18.45■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Cnnm1Q0GA42 951 aa18.45■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Srgap3Q812A2 1099 aa18.45■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Nat10Q8K224 1024 aaKnown RBP18.45■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 AqrQ8CFQ3 1481 aaKnown RBP18.44■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Ppp6r1Q7TSI3 856 aa18.44■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Ppm1eQ80TL0 749 aa18.44■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 CadpsQ80TJ1 1355 aa18.44■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Fam13bQ8K2H3 851 aa18.43■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Dctn1O08788 1281 aa18.43■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Fkbp4P30416 458 aa18.43■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Ppip5k2Q6ZQB6 1129 aa18.43■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Top1mtQ8R4U6 593 aa18.43■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 NinlQ6ZQ12 1394 aa18.43■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Zranb3Q6NZP1 1069 aa18.42■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 A0A0U1RNP2 1173 aa18.42■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 SelenooQ9DBC0 667 aa18.42■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Dennd6aQ8BH65 605 aa18.42■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Ppp4r3bQ922R5 820 aa18.42■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Aldh1l1Q8R0Y6 902 aa18.42■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Kcnh8P59111 1102 aa18.41■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Smg7Q5RJH6 1138 aaKnown RBP18.41■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Pmfbp1Q9WVQ0 1022 aa18.41■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Smc5Q8CG46 1101 aaKnown RBP18.41■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 DroshaQ5HZJ0 1373 aaKnown RBP18.41■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Gm14025A2AP89 1413 aa18.41■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 L3mbtl2P59178 703 aa18.41■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 PalmQ9Z0P4 383 aa18.41■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Cep112Q5PR68 954 aa18.41■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Rfx7F8VPJ6 1459 aa18.4■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 ScaperF8VQ70 1398 aaKnown RBP18.4■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Ehmt1Q5DW34 1296 aa18.4■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Kiaa0753Q6A000 959 aa18.4■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Phldb2Q8K1N2 1249 aa18.4■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Cdc45Q9Z1X9 566 aa18.4■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 NefhP19246 1090 aa18.4■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Nap1l1P28656 391 aaKnown RBP18.4■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Nup88Q8CEC0 753 aaKnown RBP18.4■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Dnaaf4Q8R368 420 aa18.4■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 PtprkP35822 1457 aa18.4■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Cavin1O54724 392 aa18.4■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Maco1Q7TQE6 664 aaKnown RBP18.39■□□□□ 0.54
Pcdha9-201ENSMUST00000115659 Cfap58B2RW38 873 aa18.39■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms