RNA–Protein interactions for RNA: ENSMUST00000087050.6

Col4a4-201, Transcript of Collagen alpha-4(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a4, Length 10,108 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4-201ENSMUST00000087050 Q9D9S1 216 aa11.78□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Odf2lQ9D478 642 aa11.78□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Cfap58B2RW38 873 aa11.77□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Gsto1O09131 240 aa11.77□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Pank1Q8K4K6 548 aa11.77□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Myom3A2ABU4 1439 aa11.77□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Tiam1Q60610 1591 aa11.77□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Shroom4Q1W617 1475 aa11.77□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Prl7d1P04769 244 aa11.77□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Erc1Q99MI1 1120 aa11.77□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Ddx46Q569Z5 1032 aaKnown RBP11.77□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Olfml1Q8BSH2 233 aa11.77□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Slu7Q8BHJ9 585 aa11.76□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Znf526Q8BI66 675 aa11.76□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Pak3Q61036 559 aa11.76□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Tnpo1Q8BFY9 898 aaKnown RBP11.76□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Cfap45Q9D9U9 551 aa11.76□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Esx1O88933 382 aa11.76□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Washc2Q6PGL7 1334 aa11.76□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Ccdc181Q80ZU5 509 aa11.76□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Abcd1P48410 736 aa11.76□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Cep57l1Q8VDS7 400 aa11.76□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Ggt6Q6PDE7 497 aa11.75□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Ppp6r1Q7TSI3 856 aa11.75□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Sart1Q9Z315 806 aaKnown RBP11.75□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Atad2bE9Q166 1460 aaKnown RBP11.75□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Ncapd3Q6ZQK0 1506 aa11.75□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Paf1Q8K2T8 535 aa11.75□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Cdc45Q9Z1X9 566 aa11.75□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Neurod6P48986 337 aa11.75□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Cfap53Q9D439 514 aa11.75□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Wdr33Q8K4P0 1330 aaKnown RBP11.75□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Cavin4A2AMM0 362 aa11.75□□□□□ -0.53
Col4a4-201ENSMUST00000087050 ImpactO55091 318 aa11.75□□□□□ -0.53
Col4a4-201ENSMUST00000087050 IncenpQ9WU62 880 aa11.75□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Ccar2Q8VDP4 922 aaKnown RBP11.74□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Fez2Q6TYB5 348 aa11.74□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Nup88Q8CEC0 753 aaKnown RBP11.74□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Commd10Q8JZY2 202 aa11.74□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Rsph6aQ8CDR2 708 aa11.74□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Phldb1Q6PDH0 1371 aaKnown RBP11.74□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Iqgap2Q3UQ44 1575 aa11.74□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Adck5Q80V03 582 aa11.74□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Lmbr1Q9JIT0 490 aa11.74□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Arhgap5P97393 1501 aa11.73□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Gtf2f1Q3THK3 508 aaKnown RBP11.73□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Wasf1Q8R5H6 559 aa11.73□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Asxl1P59598 1514 aa11.73□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Tango6Q8C3S2 1079 aa11.73□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Erlin1Q91X78 346 aa11.73□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Cyp26c1B2RXA7 518 aa11.73□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Gnai2P08752 355 aaKnown RBP11.73□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Cc2d1aQ8K1A6 943 aa11.73□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Pdia4P08003 638 aaKnown RBP11.73□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Arhgef5E9Q7D5 1581 aa11.73□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Spata24Q6P926 205 aa11.72□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Rpgrip1lQ8CG73 1264 aa11.72□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Ehmt1Q5DW34 1296 aa11.72□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Fmnl2A2APV2 1086 aa11.71□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Ift57Q8BXG3 429 aa11.71□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Ccdc191J3QQ27 883 aa11.71□□□□□ -0.53
Col4a4-201ENSMUST00000087050 FosbP13346 338 aa11.71□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Clul1Q3ZRW6 464 aa11.71□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Hs1bp3Q3TC93 395 aa11.71□□□□□ -0.53
Col4a4-201ENSMUST00000087050 Zfp444Q3TDV8 331 aaKnown RBP11.71□□□□□ -0.54
Col4a4-201ENSMUST00000087050 LrpprcQ6PB66 1392 aaKnown RBP11.71□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Prpf4bQ61136 1007 aaKnown RBP11.71□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Gm10471E9Q1C7 252 aa11.71□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Cep89Q9CZX2 791 aa11.7□□□□□ -0.54
Col4a4-201ENSMUST00000087050 CenphQ9QYM8 241 aa11.7□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Abcf1Q6P542 837 aaKnown RBP11.7□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Smtnl1Q99LM3 459 aa11.7□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Nphp1Q9QY53 687 aa11.7□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Ttll5Q8CHB8 1328 aa11.7□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Ssh1Q76I79 1042 aa11.7□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Sos1Q62245 1319 aa11.7□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Mipol1Q9D9F8 279 aa11.69□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Prdm16A2A935 1275 aa11.69□□□□□ -0.54
Col4a4-201ENSMUST00000087050 AcrbpQ3V140 540 aa11.69□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Ddx19aQ61655 478 aaKnown RBP11.69□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Senp3Q9EP97 568 aaKnown RBP11.69□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Gm45140A0A0N4SUM8 220 aa11.69□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Pafah1b1P63005 410 aaKnown RBP11.69□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Hvcn1Q3U2S8 269 aa11.69□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Acbd3Q8BMP6 525 aa11.69□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Lamb3Q61087 1168 aa11.69□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Slc13a4Q8BZ82 625 aa11.69□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Mex3cQ05A36 652 aaKnown RBP11.68□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Gm21190A0A0G2JGJ6 266 aa11.68□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Anapc15-psA0A140T8L6 141 aa11.68□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Brms1Q99N20 246 aa11.68□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Cep131Q62036 1060 aa11.68□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Mctp1E9PV86 951 aa11.68□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Rbm28Q8CGC6 750 aaKnown RBP11.68□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Gm18336A0A140LIU8 765 aa11.68□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Larp1Q6ZQ58 1072 aaKnown RBP11.68□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Mink1Q9JM52 1308 aa11.68□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Gm7361D3Z6R1 267 aa11.67□□□□□ -0.54
Col4a4-201ENSMUST00000087050 Nap1l5Q9JJF0 156 aa11.67□□□□□ -0.54
Col4a4-201ENSMUST00000087050 TchhA0A0B4J1F9 1599 aa11.67□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 128.7 ms