RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 C2orf42Q9NWW7 574 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 SFMBT1Q9UHJ3 866 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 AMFRQ9UKV5 643 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 PACSIN2Q9UNF0 486 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-228ENST00000641847 GPSM3Q9Y4H4 160 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 DENND4CQ5VZ89 1909 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 SPAG17Q6Q759 2223 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 C2orf78A6NCI8 922 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 KIF2AO00139 706 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-228ENST00000641847 NRG2O14511 850 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-228ENST00000641847 ENC1O14682 589 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 FANCGO15287 622 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 COCHO43405 550 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 PSTPIP1O43586 416 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 MOSPD3O75425 235 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 ENDOD1O94919 500 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 ZIC2O95409 532 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-228ENST00000641847 APBB3O95704 486 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 TBX18O95935 607 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 OAS1P00973 400 aaKnown RBP9.73□□□□□ -0.85
PHGDH-228ENST00000641847 ATP1A1P05023 1023 aaKnown RBP9.73□□□□□ -0.85
PHGDH-228ENST00000641847 GJA1P17302 382 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 CTNNA2P26232 953 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 MIPP30301 263 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 CTNNA1P35221 906 aaKnown RBP9.73□□□□□ -0.85
PHGDH-228ENST00000641847 PCK1P35558 622 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 MARCKSL1P49006 195 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 SIM1P81133 766 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-228ENST00000641847 DEUP1Q05D60 604 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 TEAD2Q15562 447 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 USP39Q53GS9 565 aaKnown RBP9.73□□□□□ -0.85
PHGDH-228ENST00000641847 ARHGAP15Q53QZ3 475 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 STXBP5Q5T5C0 1151 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 MEI1Q5TIA1 1274 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 TXNDC8Q6A555 127 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 SCYL2Q6P3W7 929 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 KLHDC10Q6PID8 442 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 POTEHQ6S545 545 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 SND1Q7KZF4 910 aaKnown RBP eCLIP9.73□□□□□ -0.857e-7■□□□□ 8.7
PHGDH-228ENST00000641847 FAM131BQ86XD5 332 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 MIB1Q86YT6 1006 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 CCDC26Q8TAB7 109 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 TTC8Q8TAM2 541 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 CD101Q93033 1021 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 PGAP3Q96FM1 320 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-228ENST00000641847 PEBP4Q96S96 227 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 NAPGQ99747 312 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-228ENST00000641847 NCAPGQ9BPX3 1015 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 NUSAP1Q9BXS6 441 aaKnown RBP9.73□□□□□ -0.85
PHGDH-228ENST00000641847 ZWILCHQ9H900 591 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 GTSE1Q9NYZ3 720 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 MARCH2Q9P0N8 246 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 PCSK1NQ9UHG2 260 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 DNAI1Q9UI46 699 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 KLK13Q9UKR3 277 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 JRKLQ9Y4A0 524 aa9.73□□□□□ -0.85
PHGDH-228ENST00000641847 HELZP42694 1942 aaKnown RBP9.72□□□□□ -0.85
PHGDH-228ENST00000641847 NOTCH4Q99466 2003 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 NAV2Q8IVL1 2488 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 TRAV19A0A0A6YYK7 116 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 SLC12A8A0AV02 714 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 CTAGE9A4FU28 777 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 MIF4GDA9UHW6 222 aaKnown RBP9.72□□□□□ -0.85
PHGDH-228ENST00000641847 DDX3YO15523 660 aaKnown RBP9.72□□□□□ -0.85
PHGDH-228ENST00000641847 PRPSAP2O60256 369 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 F9P00740 461 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 KRT1P04264 644 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 TUBB4AP04350 444 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 HMBSP08397 361 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 MBL2P11226 248 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-228ENST00000641847 DDX6P26196 483 aaKnown RBP eCLIP9.72□□□□□ -0.85
PHGDH-228ENST00000641847 IL1R2P27930 398 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 CASQ1P31415 396 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 ATP5C1P36542 298 aaKnown RBP9.72□□□□□ -0.85
PHGDH-228ENST00000641847 ATXN3P54252 364 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-228ENST00000641847 TBX4P57082 545 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 C19orf57Q0VDD7 668 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 NNTQ13423 1086 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 RPS6KA1Q15418 735 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 TRIP4Q15650 581 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-228ENST00000641847 HADHQ16836 314 aaKnown RBP9.72□□□□□ -0.85
PHGDH-228ENST00000641847 ZNF423Q2M1K9 1284 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 SMTNL2Q2TAL5 461 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 FBXO43Q4G163 708 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 GPR158Q5T848 1215 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 ARID3BQ8IVW6 561 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-228ENST00000641847 RHOT1Q8IXI2 618 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 HDDC3Q8N4P3 179 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 ZNF276Q8N554 614 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 CCDC185Q8N715 623 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 UBL4BQ8N7F7 174 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 ZNF592Q92610 1267 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 KRT35Q92764 455 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 RNF34Q969K3 372 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 HES6Q96HZ4 224 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 KLHL11Q9NVR0 708 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 SMPD4Q9NXE4 827 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 OBP2AQ9NY56 170 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 EBF1Q9UH73 591 aa9.72□□□□□ -0.85
PHGDH-228ENST00000641847 DNMT3LQ9UJW3 386 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms