RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 SLC24A2Q9UI40 661 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 CHMP2BQ9UQN3 213 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 KCNK1O00180 336 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 TLR5O60602 858 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 TBX18O95935 607 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 CSH1P0DML2 217 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 CSH2P0DML3 217 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 MLNP12872 115 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 PTPN3P26045 913 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 SSTR1P30872 391 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 MAGEA3P43357 314 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 MMP13P45452 471 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 GNGT1P63211 74 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 RASA2Q15283 850 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 LRRC31Q6UY01 552 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 CAPN12Q6ZSI9 719 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 MIB1Q86YT6 1006 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 GPR65Q8IYL9 337 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 ARHGEF2Q92974 986 aaKnown RBP16.87■□□□□ 0.29
PHGDH-216ENST00000641375 DOCK4Q8N1I0 1966 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 WASH4PA8MWX3 477 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 AVILO75366 819 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 IGLV3-27P01718 113 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 CCNCP24863 283 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 ALDH1A3P47895 512 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 IRAK1P51617 712 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 NR1H3Q13133 447 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 FAM182AQ5T1J6 154 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 PIK3R6Q5UE93 754 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 SNX30Q5VWJ9 437 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 LEKR1Q6ZMV7 388 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 OTOP2Q7RTS6 562 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 LRRC49Q8IUZ0 686 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 RTL3Q8N8U3 475 aaKnown RBP16.87■□□□□ 0.29
PHGDH-216ENST00000641375 TSGA13Q96PP4 275 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 ACSS3Q9H6R3 686 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 EURLQ9NYK6 297 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 PPARGC1AQ9UBK2 798 aaKnown RBP16.87■□□□□ 0.29
PHGDH-216ENST00000641375 RABGEF1Q9UJ41 708 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 PCDHB12Q9Y5F1 795 aa16.87■□□□□ 0.29
PHGDH-216ENST00000641375 PTPRSQ13332 1948 aa16.86■□□□□ 0.29
PHGDH-216ENST00000641375 KIAA1671Q9BY89 1806 aa16.86■□□□□ 0.29
PHGDH-216ENST00000641375 SLC12A8A0AV02 714 aa16.86■□□□□ 0.29
PHGDH-216ENST00000641375 MAGEA9P43362 315 aa16.86■□□□□ 0.29
PHGDH-216ENST00000641375 GEMIN4P57678 1058 aaKnown RBP16.86■□□□□ 0.29
PHGDH-216ENST00000641375 GUCY1A3Q02108 690 aa16.86■□□□□ 0.29
PHGDH-216ENST00000641375 MTM1Q13496 603 aa16.86■□□□□ 0.29
PHGDH-216ENST00000641375 RAB33AQ14088 237 aa16.86■□□□□ 0.29
PHGDH-216ENST00000641375 MS4A13Q5J8X5 152 aa16.86■□□□□ 0.29
PHGDH-216ENST00000641375 NUGGCQ68CJ6 796 aa16.86■□□□□ 0.29
PHGDH-216ENST00000641375 ITPRIPL1Q6GPH6 555 aa16.86■□□□□ 0.29
PHGDH-216ENST00000641375 ATPAF2Q8N5M1 289 aa16.86■□□□□ 0.29
PHGDH-216ENST00000641375 CELF6Q96J87 481 aaKnown RBP16.86■□□□□ 0.29
PHGDH-216ENST00000641375 ZNF512Q96ME7 567 aaPredicted RBP16.86■□□□□ 0.29
PHGDH-216ENST00000641375 CYP4F11Q9HBI6 524 aa16.86■□□□□ 0.29
PHGDH-216ENST00000641375 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.86■□□□□ 0.29
PHGDH-216ENST00000641375 MRPL17Q9NRX2 175 aaKnown RBP16.86■□□□□ 0.29
PHGDH-216ENST00000641375 CTNNAL1Q9UBT7 734 aa16.86■□□□□ 0.29
PHGDH-216ENST00000641375 MAFFQ9ULX9 164 aa16.86■□□□□ 0.29
PHGDH-216ENST00000641375 HBS1LQ9Y450 684 aaKnown RBP16.86■□□□□ 0.29
PHGDH-216ENST00000641375 POC1B-GALNT4F8VUJ3 575 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 SEC24AO95486 1093 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 GSTA2P09210 222 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 PSMB4P28070 264 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 CREMQ03060 361 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 TEX44Q53QW1 395 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 EXOC3L1Q86VI1 746 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 FBF1Q8TES7 1133 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 MYRFLQ96LU7 910 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 CEP41Q9BYV8 373 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 CCSER2Q9H7U1 834 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 PRKAG2Q9UGJ0 569 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 TBK1Q9UHD2 729 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 DNMT3LQ9UJW3 386 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 ACTL7BQ9Y614 415 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 DFFAO00273 331 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 ATP5C1P36542 298 aaKnown RBP16.85■□□□□ 0.29
PHGDH-216ENST00000641375 PPIGQ13427 754 aaKnown RBP eCLIP16.85■□□□□ 0.291e-6■□□□□ 10
PHGDH-216ENST00000641375 VEPH1Q14D04 833 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 TAF12Q16514 161 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 TTC31Q49AM3 519 aaPredicted RBP16.85■□□□□ 0.29
PHGDH-216ENST00000641375 ARTNQ5T4W7 220 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 ZNF534Q76KX8 674 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 IGDCC3Q8IVU1 814 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 PDCD7Q8N8D1 485 aaKnown RBP16.85■□□□□ 0.29
PHGDH-216ENST00000641375 CYTH2Q99418 400 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 ZYG11BQ9C0D3 744 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 PSMC3IPQ9P2W1 217 aaPredicted RBP16.85■□□□□ 0.29
PHGDH-216ENST00000641375 ZC3H7BQ9UGR2 993 aaKnown RBP16.85■□□□□ 0.29
PHGDH-216ENST00000641375 VANGL2Q9ULK5 521 aa16.85■□□□□ 0.29
PHGDH-216ENST00000641375 IGLV3-10A0A075B6K4 115 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 ERI2A8K979 691 aaKnown RBP16.84■□□□□ 0.29
PHGDH-216ENST00000641375 ZBBXA8MT70 800 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 RHOQP17081 205 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 GCAP28676 217 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 ELF1P32519 619 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 STX2P32856 288 aa16.84■□□□□ 0.29
PHGDH-216ENST00000641375 TTC19Q6DKK2 380 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-216ENST00000641375 TIGD7Q6NT04 549 aaPredicted RBP16.84■□□□□ 0.29
PHGDH-216ENST00000641375 LRRC8BQ6P9F7 803 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms