RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 RAD51CO43502 376 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 CNTN5O94779 1100 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 RHOXF2BP0C7M4 288 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 MX2P20592 715 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 PDK1Q15118 436 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 ERCC6LQ2NKX8 1250 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 GPR153Q6NV75 609 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 DARS2Q6PI48 645 aaKnown RBP20.38■□□□□ 0.85
PHGDH-210ENST00000641115 POTEHQ6S545 545 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 GSTA5Q7RTV2 222 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 CDKL3Q8IVW4 592 aaPredicted RBP20.38■□□□□ 0.85
PHGDH-210ENST00000641115 CPXM2Q8N436 756 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 HJURPQ8NCD3 748 aaPredicted RBP20.38■□□□□ 0.85
PHGDH-210ENST00000641115 SMARCD2Q92925 531 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 SLCO2A1Q92959 643 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 MYEOVQ96EZ4 313 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 ASB16Q96NS5 453 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 OLFM3Q96PB7 478 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 RHOXF2Q9BQY4 288 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 TBC1D14Q9P2M4 693 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 CDH7Q9ULB5 785 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 A0A1B0GVM2 712 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 TCAF2A6NFQ2 919 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 TTI1O43156 1089 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 TSPAN3O60637 253 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 MAPKAPK2P49137 400 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 CDH4P55283 916 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 RPS24P62847 133 aaKnown RBP20.38■□□□□ 0.85
PHGDH-210ENST00000641115 FAM78AQ5JUQ0 283 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 CIR1Q86X95 450 aaPredicted RBP20.38■□□□□ 0.85
PHGDH-210ENST00000641115 NECTIN4Q96NY8 510 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 TMEM121Q9BTD3 319 aa20.38■□□□□ 0.85
PHGDH-210ENST00000641115 FAM187AA6NFU0 413 aa20.37■□□□□ 0.85
PHGDH-210ENST00000641115 HACD1B0YJ81 288 aa20.37■□□□□ 0.85
PHGDH-210ENST00000641115 SGK1O00141 431 aa20.37■□□□□ 0.85
PHGDH-210ENST00000641115 CTIFO43310 598 aaKnown RBP20.37■□□□□ 0.85
PHGDH-210ENST00000641115 CLDN11O75508 207 aa20.37■□□□□ 0.85
PHGDH-210ENST00000641115 OR1E1P30953 314 aa20.37■□□□□ 0.85
PHGDH-210ENST00000641115 PPP1R7Q15435 360 aa20.37■□□□□ 0.85
PHGDH-210ENST00000641115 CHST9Q7L1S5 443 aa20.37■□□□□ 0.85
PHGDH-210ENST00000641115 UMODL1-AS1Q8N2C9 162 aa20.37■□□□□ 0.85
PHGDH-210ENST00000641115 CCDC33Q8N5R6 958 aa20.37■□□□□ 0.85
PHGDH-210ENST00000641115 TDRD5Q8NAT2 981 aaKnown RBP20.37■□□□□ 0.85
PHGDH-210ENST00000641115 SMRP1Q8NCR6 262 aa20.37■□□□□ 0.85
PHGDH-210ENST00000641115 RIN3Q8TB24 985 aa20.37■□□□□ 0.85
PHGDH-210ENST00000641115 TFB1MQ8WVM0 346 aaKnown RBP20.37■□□□□ 0.85
PHGDH-210ENST00000641115 RSAD2Q8WXG1 361 aa20.37■□□□□ 0.85
PHGDH-210ENST00000641115 MYLIPQ8WY64 445 aa20.37■□□□□ 0.85
PHGDH-210ENST00000641115 CELF6Q96J87 481 aaKnown RBP20.37■□□□□ 0.85
PHGDH-210ENST00000641115 NDFIP2Q9NV92 336 aa20.37■□□□□ 0.85
PHGDH-210ENST00000641115 NUP205Q92621 2012 aa20.36■□□□□ 0.85
PHGDH-210ENST00000641115 CFAP69A5D8W1 941 aa20.36■□□□□ 0.85
PHGDH-210ENST00000641115 SLC9A3R1O14745 358 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-210ENST00000641115 CYBBP04839 570 aa20.36■□□□□ 0.85
PHGDH-210ENST00000641115 SGSHP51688 502 aa20.36■□□□□ 0.85
PHGDH-210ENST00000641115 NDST2P52849 883 aa20.36■□□□□ 0.85
PHGDH-210ENST00000641115 MRPS25P82663 173 aaKnown RBP20.36■□□□□ 0.85
PHGDH-210ENST00000641115 GALNT2Q10471 571 aa20.36■□□□□ 0.85
PHGDH-210ENST00000641115 SLC45A4Q5BKX6 768 aa20.36■□□□□ 0.85
PHGDH-210ENST00000641115 SYDE1Q6ZW31 735 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-210ENST00000641115 JAMLQ86YT9 394 aa20.36■□□□□ 0.85
PHGDH-210ENST00000641115 ALLCQ8N6M5 410 aa20.36■□□□□ 0.85
PHGDH-210ENST00000641115 KIAA1958Q8N8K9 716 aa20.36■□□□□ 0.85
PHGDH-210ENST00000641115 NETO2Q8NC67 525 aa20.36■□□□□ 0.85
PHGDH-210ENST00000641115 CCNYQ8ND76 341 aa20.36■□□□□ 0.85
PHGDH-210ENST00000641115 OTUB2Q96DC9 234 aa20.36■□□□□ 0.85
PHGDH-210ENST00000641115 TMA16Q96EY4 203 aaKnown RBP20.36■□□□□ 0.85
PHGDH-210ENST00000641115 QKIQ96PU8 341 aaKnown RBP eCLIP20.36■□□□□ 0.85
PHGDH-210ENST00000641115 FERMT1Q9BQL6 677 aa20.36■□□□□ 0.85
PHGDH-210ENST00000641115 KLC2Q9H0B6 622 aa20.36■□□□□ 0.85
PHGDH-210ENST00000641115 RAB17Q9H0T7 212 aa20.36■□□□□ 0.85
PHGDH-210ENST00000641115 CD207Q9UJ71 328 aa20.36■□□□□ 0.85
PHGDH-210ENST00000641115 BCLAF3A2AJT9 711 aaKnown RBP20.35■□□□□ 0.85
PHGDH-210ENST00000641115 DFFAO00273 331 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 TBL1XO60907 577 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 ZNF189O75820 626 aaPredicted RBP20.35■□□□□ 0.85
PHGDH-210ENST00000641115 HEXIM1O94992 359 aaKnown RBP20.35■□□□□ 0.85
PHGDH-210ENST00000641115 GBP2P32456 591 aaPredicted RBP20.35■□□□□ 0.85
PHGDH-210ENST00000641115 PTGIRP43119 386 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 SLC7A5Q01650 507 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 MPPE1Q53F39 396 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 DDI1Q8WTU0 396 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 HDAC11Q96DB2 347 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 CDX2Q99626 313 aaPredicted RBP20.35■□□□□ 0.85
PHGDH-210ENST00000641115 BRD8Q9H0E9 1235 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 POMKQ9H5K3 350 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 OBP2AQ9NY56 170 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 ZNF212Q9UDV6 495 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 UTP11Q9Y3A2 253 aaKnown RBP20.35■□□□□ 0.85
PHGDH-210ENST00000641115 SHROOM3Q8TF72 1996 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 DOCK8Q8NF50 2099 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 NYNRINQ9P2P1 1898 aaKnown RBP20.35■□□□□ 0.85
PHGDH-210ENST00000641115 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.35■□□□□ 0.85
PHGDH-210ENST00000641115 TARSL2A2RTX5 802 aaKnown RBP20.35■□□□□ 0.85
PHGDH-210ENST00000641115 GFRA2O00451 464 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 RAMP2O60895 175 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 STIP1P31948 543 aaKnown RBP20.35■□□□□ 0.85
PHGDH-210ENST00000641115 GARSP41250 739 aaKnown RBP20.35■□□□□ 0.85
PHGDH-210ENST00000641115 VIPR2P41587 438 aa20.35■□□□□ 0.85
PHGDH-210ENST00000641115 TERF1P54274 439 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms