RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 NLGN2Q8NFZ4 835 aa17.94■□□□□ 0.46
SCARB2-223ENST00000640640 EBNA1BP2Q99848 306 aaKnown RBP17.94■□□□□ 0.46
SCARB2-223ENST00000640640 DUSP16Q9BY84 665 aa17.94■□□□□ 0.46
SCARB2-223ENST00000640640 TSPAN3O60637 253 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 PPP3CCP48454 512 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 DACT3Q96B18 629 aaPredicted RBP17.93■□□□□ 0.46
SCARB2-223ENST00000640640 THUMPD3Q9BV44 507 aaKnown RBP17.93■□□□□ 0.46
SCARB2-223ENST00000640640 ADNPQ9H2P0 1102 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 IPPQ9Y573 584 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 XPO1O14980 1071 aaKnown RBP17.93■□□□□ 0.46
SCARB2-223ENST00000640640 UBDO15205 165 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 ATP6V1G2O95670 118 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 NFKB1P19838 968 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 MMP13P45452 471 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 PLIN5Q00G26 463 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 GALNTL6Q49A17 601 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 AGKQ53H12 422 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 SPATA17Q96L03 361 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 RBBP8Q99708 897 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 TMEM51Q9NW97 253 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 NR2E1Q9Y466 385 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 DHX15O43143 795 aaKnown RBP17.93■□□□□ 0.46
SCARB2-223ENST00000640640 CHRNB2P17787 502 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 OCA2Q04671 838 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 PTK2BQ14289 1009 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 RGMBQ6NW40 437 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 UNC5AQ6ZN44 842 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 XYLT1Q86Y38 959 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 TOP6BLQ8N6T0 577 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 POU5F2Q8N7G0 328 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 MYLPFQ96A32 169 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 C17orf80Q9BSJ5 609 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 PDZD7Q9H5P4 517 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 AJAP1Q9UKB5 411 aaPredicted RBP17.93■□□□□ 0.46
SCARB2-223ENST00000640640 STARD13Q9Y3M8 1113 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 DTNAQ9Y4J8 743 aa17.93■□□□□ 0.46
SCARB2-223ENST00000640640 TTLL13PA6NNM8 815 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 SPTLC1O15269 473 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 BTKQ06187 659 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 TMED1Q13445 227 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 BTG3Q14201 252 aaPredicted RBP17.92■□□□□ 0.46
SCARB2-223ENST00000640640 PDK4Q16654 411 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 BTBD10Q9BSF8 475 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 NEUROG2Q9H2A3 272 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 APOBEC3GQ9HC16 384 aaKnown RBP17.92■□□□□ 0.46
SCARB2-223ENST00000640640 FAM35AQ86V20 835 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 TAGAPQ8N103 731 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 NAF1Q96HR8 494 aaKnown RBP17.92■□□□□ 0.46
SCARB2-223ENST00000640640 PCDHGC3Q9UN70 934 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 SCN11AQ9UI33 1791 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 TPP1O14773 563 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 PRKAA2P54646 552 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 TTC27Q6P3X3 843 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 RRM2BQ7LG56 351 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 YTHDF3Q7Z739 585 aaKnown RBP17.92■□□□□ 0.46
SCARB2-223ENST00000640640 POLR1EQ9GZS1 481 aaKnown RBP17.92■□□□□ 0.46
SCARB2-223ENST00000640640 CDHR5Q9HBB8 845 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 TAS2R13Q9NYV9 303 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 EIF3LQ9Y262 564 aaKnown RBP17.92■□□□□ 0.46
SCARB2-223ENST00000640640 GIT1Q9Y2X7 761 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 TCRBV9S1A1TA0A576 114 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 ONECUT3O60422 494 aaPredicted RBP17.92■□□□□ 0.46
SCARB2-223ENST00000640640 HADHBP55084 474 aaKnown RBP17.92■□□□□ 0.46
SCARB2-223ENST00000640640 ITIH5Q86UX2 942 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 TRABD2AQ86V40 505 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 FUKQ8N0W3 1084 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 CYGBQ8WWM9 190 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 COG4Q9H9E3 785 aa17.92■□□□□ 0.46
SCARB2-223ENST00000640640 BAZ2AQ9UIF9 1905 aaKnown RBP17.92■□□□□ 0.46
SCARB2-223ENST00000640640 FSBPO95073 299 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 PLK1P53350 603 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 NOMO1Q15155 1222 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 PCID2Q5JVF3 399 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 STRADAQ7RTN6 431 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 KYQ8NBH2 561 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 PIWIL2Q8TC59 973 aaKnown RBP17.91■□□□□ 0.46
SCARB2-223ENST00000640640 FAM162AQ96A26 154 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 SAR1AQ9NR31 198 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 SEPT3Q9UH03 358 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 GLTPD2A6NH11 291 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 AVILO75366 819 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 CYP1A1P04798 512 aaPredicted RBP17.91■□□□□ 0.46
SCARB2-223ENST00000640640 DRD4P21917 467 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 SERPINH1P50454 418 aaKnown RBP17.91■□□□□ 0.46
SCARB2-223ENST00000640640 NKD2Q969F2 451 aaPredicted RBP17.91■□□□□ 0.46
SCARB2-223ENST00000640640 EMILIN2Q9BXX0 1053 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 LRRC4CQ9HCJ2 640 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 SLCO1B3Q9NPD5 702 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 UBA2Q9UBT2 640 aaPredicted RBP17.91■□□□□ 0.46
SCARB2-223ENST00000640640 STK25O00506 426 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 DCXO43602 365 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 FKBP6O75344 327 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 CCNB1P14635 433 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 CDH2P19022 906 aaPredicted RBP17.91■□□□□ 0.46
SCARB2-223ENST00000640640 DSG1Q02413 1049 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 TBL3Q12788 808 aaKnown RBP17.91■□□□□ 0.46
SCARB2-223ENST00000640640 SLC25A52Q3SY17 297 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 FUT11Q495W5 492 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 CACHD1Q5VU97 1274 aa17.91■□□□□ 0.46
SCARB2-223ENST00000640640 TFAP2BQ92481 460 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms