RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 MAT2AP31153 395 aaKnown RBP15.55■□□□□ 0.08
SYNE2-228ENST00000639659 PPP2CBP62714 309 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 PPP2CAP67775 309 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 CCDC173Q0VFZ6 552 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 ZCWPW2Q504Y3 356 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 FSCBQ5H9T9 825 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 MPP7Q5T2T1 576 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 C9orf64Q5T6V5 341 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 TBC1D3GQ6DHY5 549 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 TBC1D3CQ6IPX1 549 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 MSANTD2Q6P1R3 559 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 TMEM270Q6UE05 265 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 SND1Q7KZF4 910 aaKnown RBP eCLIP15.55■□□□□ 0.08
SYNE2-228ENST00000639659 TBC1D3Q8IZP1 549 aaPredicted RBP15.55■□□□□ 0.08
SYNE2-228ENST00000639659 AADATQ8N5Z0 425 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 FIBINQ8TAL6 211 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 KCTD13Q8WZ19 329 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 BAP1Q92560 729 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 TTC17Q96AE7 1141 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 FAM149B1Q96BN6 582 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 FAXDC2Q96IV6 333 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 MRGPRX3Q96LB0 322 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 FZD4Q9ULV1 537 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 HPSEQ9Y251 543 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 PCDHB4Q9Y5E5 795 aa15.55■□□□□ 0.08
SYNE2-228ENST00000639659 EDDM13A0A1B0GTR0 161 aa15.54■□□□□ 0.08
SYNE2-228ENST00000639659 YKT6O15498 198 aa15.54■□□□□ 0.08
SYNE2-228ENST00000639659 IGLV3-27P01718 113 aa15.54■□□□□ 0.08
SYNE2-228ENST00000639659 BRD2P25440 801 aaKnown RBP15.54■□□□□ 0.08
SYNE2-228ENST00000639659 STK19P49842 368 aaPredicted RBP15.54■□□□□ 0.08
SYNE2-228ENST00000639659 ADPRHP54922 357 aa15.54■□□□□ 0.08
SYNE2-228ENST00000639659 NXPH1P58417 271 aa15.54■□□□□ 0.08
SYNE2-228ENST00000639659 EDRF1Q3B7T1 1238 aa15.54■□□□□ 0.08
SYNE2-228ENST00000639659 POM121L1PQ3SYA9 428 aa15.54■□□□□ 0.08
SYNE2-228ENST00000639659 PMF1Q6P1K2 205 aa15.54■□□□□ 0.08
SYNE2-228ENST00000639659 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.54■□□□□ 0.08
SYNE2-228ENST00000639659 CHSY1Q86X52 802 aa15.54■□□□□ 0.08
SYNE2-228ENST00000639659 LGI2Q8N0V4 545 aa15.54■□□□□ 0.08
SYNE2-228ENST00000639659 TFAP2BQ92481 460 aa15.54■□□□□ 0.08
SYNE2-228ENST00000639659 SLCO3A1Q9UIG8 710 aa15.54■□□□□ 0.08
SYNE2-228ENST00000639659 SETXQ7Z333 2677 aaKnown RBP15.54■□□□□ 0.08
SYNE2-228ENST00000639659 KNTC1P50748 2209 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 A0A1W2PR77 199 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 TLR4O00206 839 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 ATXN7O15265 892 aaPredicted RBP15.53■□□□□ 0.08
SYNE2-228ENST00000639659 BRINP1O60477 761 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 C1QL1O75973 258 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 LUC7L3O95232 432 aaKnown RBP15.53■□□□□ 0.08
SYNE2-228ENST00000639659 ADH1BP00325 375 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 C1SP09871 688 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 CDK4P11802 303 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 GOT1P17174 413 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 GLDCP23378 1020 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 CCR5P51681 352 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 CXADRP78310 365 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 NUCB2P80303 420 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 ECT2LQ008S8 904 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 DCAF6Q58WW2 860 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 RAP1GAP2Q684P5 730 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 KDM7AQ6ZMT4 941 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 KRBA2Q6ZNG9 492 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 APCDD1Q8J025 514 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 DQX1Q8TE96 717 aaKnown RBP15.53■□□□□ 0.08
SYNE2-228ENST00000639659 IRGQQ8WZA9 623 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 NAF1Q96HR8 494 aaKnown RBP15.53■□□□□ 0.08
SYNE2-228ENST00000639659 LMLNQ96KR4 655 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 FCRL2Q96LA5 508 aaPredicted RBP15.53■□□□□ 0.08
SYNE2-228ENST00000639659 SERPINB11Q96P15 392 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 TSG101Q99816 390 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 MYOCQ99972 504 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 PRORYQ9H606 182 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 ST7Q9NRC1 585 aa15.53■□□□□ 0.08
SYNE2-228ENST00000639659 TARSL2A2RTX5 802 aaKnown RBP15.52■□□□□ 0.08
SYNE2-228ENST00000639659 BNIP3LO60238 219 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 GABBR2O75899 941 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 APOEP02649 317 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 SRPRAP08240 638 aaKnown RBP15.52■□□□□ 0.08
SYNE2-228ENST00000639659 C7P10643 843 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 VAV1P15498 845 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 C5AR1P21730 350 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 TBXAS1P24557 533 aaPredicted RBP15.52■□□□□ 0.08
SYNE2-228ENST00000639659 MZF1P28698 734 aaPredicted RBP15.52■□□□□ 0.08
SYNE2-228ENST00000639659 METAP1P53582 386 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 KRT85P78386 507 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 MS4A13Q5J8X5 152 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 NAPEPLDQ6IQ20 393 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 FBXL19Q6PCT2 694 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 LCLAT1Q6UWP7 414 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 PRPF39Q86UA1 669 aaKnown RBP15.52■□□□□ 0.08
SYNE2-228ENST00000639659 CIR1Q86X95 450 aaPredicted RBP15.52■□□□□ 0.08
SYNE2-228ENST00000639659 OXR1Q8N573 874 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 FAM129BQ96TA1 746 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 TJP2Q9UDY2 1190 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 ADAMTS1Q9UHI8 967 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 XPO7Q9UIA9 1087 aaKnown RBP15.52■□□□□ 0.08
SYNE2-228ENST00000639659 CLCA2Q9UQC9 943 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 NAALADL1Q9UQQ1 740 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 CA5BQ9Y2D0 317 aa15.52■□□□□ 0.08
SYNE2-228ENST00000639659 CAPN9O14815 690 aa15.51■□□□□ 0.07
SYNE2-228ENST00000639659 RTN2O75298 545 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms