RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 STARD7Q9NQZ5 370 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 RGS18Q9NS28 235 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 PNMA8BQ9ULN7 279 aaPredicted RBP14.71□□□□□ -0.05
SCARB2-216ENST00000639300 H2AFYO75367 372 aaKnown RBP14.71□□□□□ -0.05
SCARB2-216ENST00000639300 TPBGLP0DKB5 382 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 AASDHQ4L235 1098 aaPredicted RBP14.71□□□□□ -0.05
SCARB2-216ENST00000639300 ANKRD22Q5VYY1 191 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 EFCAB3Q8N7B9 438 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 LPCAT1Q8NF37 534 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 CPT1BQ92523 772 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 OMDQ99983 421 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 SYTL2Q9HCH5 934 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 KCNK4Q9NYG8 393 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 VPS9D1Q9Y2B5 631 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 COQ4Q9Y3A0 265 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 BAZ2AQ9UIF9 1905 aaKnown RBP14.71□□□□□ -0.05
SCARB2-216ENST00000639300 RHOAP61586 193 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 ST8SIA6P61647 398 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 GTF2H3Q13889 308 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 NFYCQ13952 458 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 RNF43Q68DV7 783 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 TTC33Q6PID6 262 aaPredicted RBP14.71□□□□□ -0.05
SCARB2-216ENST00000639300 DEFB128Q7Z7B8 93 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 FAM162AQ96A26 154 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 CLPBQ9H078 707 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 LHX5Q9H2C1 402 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 TOMM70O94826 608 aa14.71□□□□□ -0.06
SCARB2-216ENST00000639300 ATP4AP20648 1035 aa14.71□□□□□ -0.06
SCARB2-216ENST00000639300 MATKP42679 507 aa14.71□□□□□ -0.06
SCARB2-216ENST00000639300 PEX5P50542 639 aa14.71□□□□□ -0.06
SCARB2-216ENST00000639300 POLD3Q15054 466 aaPredicted RBP14.71□□□□□ -0.06
SCARB2-216ENST00000639300 CYP2R1Q6VVX0 501 aa14.71□□□□□ -0.06
SCARB2-216ENST00000639300 XYLT1Q86Y38 959 aa14.71□□□□□ -0.06
SCARB2-216ENST00000639300 ZNF516Q92618 1163 aa14.71□□□□□ -0.06
SCARB2-216ENST00000639300 P2RY11Q96G91 374 aa14.71□□□□□ -0.06
SCARB2-216ENST00000639300 DACH2Q96NX9 599 aa14.71□□□□□ -0.06
SCARB2-216ENST00000639300 SOWAHBA6NEL2 793 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 DHX15O43143 795 aaKnown RBP14.7□□□□□ -0.06
SCARB2-216ENST00000639300 PAPSS1O43252 624 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-216ENST00000639300 CRTAMO95727 393 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 YWHAQP27348 245 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 PPP3CCP48454 512 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 MFSD5Q6N075 450 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 PMF1Q6P1K2 205 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 LRRC74BQ6ZQY2 392 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 GPR142Q7Z601 462 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 LZTR1Q8N653 840 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 NKD2Q969F2 451 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-216ENST00000639300 HIC2Q96JB3 615 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 ZFP42Q96MM3 310 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 SERPINB11Q96P15 392 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 NIFKQ9BYG3 293 aaKnown RBP14.7□□□□□ -0.06
SCARB2-216ENST00000639300 FBXO44Q9H4M3 255 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 RRAGCQ9HB90 399 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 SCUBE2Q9NQ36 999 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 PDP2Q9P2J9 529 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 MAFBQ9Y5Q3 323 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-216ENST00000639300 TRPV2Q9Y5S1 764 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 CILPO75339 1184 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 ZNF23P17027 643 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 NOMO1Q15155 1222 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 SDHAF4Q5VUM1 108 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 ELMSAN1Q6PJG2 1045 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 EFL1Q7Z2Z2 1120 aaKnown RBP14.7□□□□□ -0.06
SCARB2-216ENST00000639300 SPATA6LQ8N4H0 392 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 VAT1Q99536 393 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 OSBPL7Q9BZF2 842 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 ATP13A1Q9HD20 1204 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 IL1RAPL1Q9NZN1 696 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 FAM50BQ9Y247 325 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 FAM95CA0A1B0GW59 222 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 PSMA4P25789 261 aaKnown RBP14.7□□□□□ -0.06
SCARB2-216ENST00000639300 GRM5P41594 1212 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 NCALDP61601 193 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 LCLAT1Q6UWP7 414 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 ZBTB49Q6ZSB9 765 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 PLD5Q8N7P1 536 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 ZSCAN18Q8TBC5 510 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-216ENST00000639300 FOPNLQ96NB1 174 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 TLR8Q9NR97 1041 aaKnown RBP14.7□□□□□ -0.06
SCARB2-216ENST00000639300 RPTORQ8N122 1335 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 SHOX2O60902 331 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-216ENST00000639300 CFHP08603 1231 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 IFNA8P32881 189 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 CACNA2D1P54289 1103 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 TAGAPQ8N103 731 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 TBL1YQ9BQ87 522 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 KLHL4Q9C0H6 718 aa14.7□□□□□ -0.06
SCARB2-216ENST00000639300 ADGRA3Q8IWK6 1321 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 EVPLLA8MZ36 301 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 DNM1LO00429 736 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 USP2O75604 605 aaPredicted RBP14.69□□□□□ -0.06
SCARB2-216ENST00000639300 LYPLA1O75608 230 aaPredicted RBP14.69□□□□□ -0.06
SCARB2-216ENST00000639300 ALBP02768 609 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 ITGA2BP08514 1039 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 PIRTP0C851 137 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 UNGP13051 313 aaPredicted RBP14.69□□□□□ -0.06
SCARB2-216ENST00000639300 DAB2P98082 770 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 CTBP1Q13363 440 aa14.69□□□□□ -0.06
SCARB2-216ENST00000639300 TTLL9Q3SXZ7 439 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms