RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 CDK15Q96Q40 435 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 TTC12Q9H892 705 aaPredicted RBP3.68□□□□□ -1.82
CCDC7-213ENST00000639290 CNNM2Q9H8M5 875 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 LRTM1Q9HBL6 345 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 ABCB6Q9NP58 842 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 TMEM160Q9NX00 188 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 LPAR3Q9UBY5 353 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 KCND3Q9UK17 655 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 FBXO10Q9UK96 956 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 B3GNT3Q9Y2A9 372 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 HERC2O95714 4834 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 SLC12A8A0AV02 714 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 ESPNB1AK53 854 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 MEIS2O14770 477 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 SLC7A4O43246 635 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 PHACTR2O75167 634 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 CDC45O75419 566 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 ERBB2P04626 1255 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 ATP5JP18859 108 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 TSFMP43897 325 aaKnown RBP3.68□□□□□ -1.82
CCDC7-213ENST00000639290 CLCNKBP51801 687 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 JAK3P52333 1124 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 DGKQP52824 942 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 CDH8P55286 799 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 ATP2C1P98194 919 aaPredicted RBP3.68□□□□□ -1.82
CCDC7-213ENST00000639290 PRKCEQ02156 737 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 DMTNQ08495 405 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 MXD4Q14582 209 aaPredicted RBP3.68□□□□□ -1.82
CCDC7-213ENST00000639290 ALX1Q15699 326 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 FAM187BQ17R55 369 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 DCAF4L1Q3SXM0 396 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 ARSHQ5FYA8 562 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 EFHC2Q5JST6 749 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 CATSPEREQ5SY80 951 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 B3GNTL1Q67FW5 361 aaPredicted RBP3.68□□□□□ -1.82
CCDC7-213ENST00000639290 C12orf54Q6X4T0 127 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 PRPF39Q86UA1 669 aaKnown RBP3.68□□□□□ -1.82
CCDC7-213ENST00000639290 PHF10Q8WUB8 498 aaKnown RBP3.68□□□□□ -1.82
CCDC7-213ENST00000639290 LEO1Q8WVC0 666 aaPredicted RBP3.68□□□□□ -1.82
CCDC7-213ENST00000639290 BTN2A2Q8WVV5 523 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 TM9SF4Q92544 642 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 C19orf60Q96EN9 201 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 SERAC1Q96JX3 654 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 NLRP4Q96MN2 994 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 SARGQ9BW04 601 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 API5Q9BZZ5 524 aaKnown RBP3.68□□□□□ -1.82
CCDC7-213ENST00000639290 RAD54BQ9Y620 910 aa3.68□□□□□ -1.82
CCDC7-213ENST00000639290 POLEQ07864 2286 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 TGP01266 2768 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 ANTXRLA6NF34 631 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 PRAMEF26H0Y7S4 382 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 PODXLO00592 558 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 ZW10O43264 779 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 DKC1O60832 514 aaKnown RBP eCLIP3.67□□□□□ -1.82
CCDC7-213ENST00000639290 CSDE1O75534 798 aaKnown RBP3.67□□□□□ -1.82
CCDC7-213ENST00000639290 IPO13O94829 963 aaKnown RBP3.67□□□□□ -1.82
CCDC7-213ENST00000639290 FOSP01100 380 aaPredicted RBP3.67□□□□□ -1.82
CCDC7-213ENST00000639290 GNAI2P04899 355 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 TIMP2P16035 220 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 PLCG1P19174 1290 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 ETV5P41161 510 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 STAT5AP42229 794 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 WASP42768 502 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 CA7P43166 264 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 BRCC3P46736 316 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 COMPP49747 757 aaPredicted RBP3.67□□□□□ -1.82
CCDC7-213ENST00000639290 Q0VFX4 171 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 KCNMA1Q12791 1236 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 CNGB1Q14028 1251 aaPredicted RBP3.67□□□□□ -1.82
CCDC7-213ENST00000639290 SLC35G1Q2M3R5 365 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 ALDH1L2Q3SY69 923 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 ZNF776Q68DI1 518 aaPredicted RBP3.67□□□□□ -1.82
CCDC7-213ENST00000639290 ESRP1Q6NXG1 681 aaKnown RBP3.67□□□□□ -1.82
CCDC7-213ENST00000639290 ARMCX5Q6P1M9 558 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 LVRNQ6Q4G3 990 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 ZSCAN30Q86W11 494 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 TRIM69Q86WT6 500 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 SLITRK4Q8IW52 837 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 KYQ8NBH2 561 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 KLHDC7BQ96G42 594 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 SEC16BQ96JE7 1060 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 C8orf48Q96LL4 319 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 FCRL4Q96PJ5 515 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 TSPAN18Q96SJ8 248 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 ACOX2Q99424 681 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 PIP5K1AQ99755 562 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 SLX1AQ9BQ83 275 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 SYT3Q9BQG1 590 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 FEM1AQ9BSK4 669 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 TARS2Q9BW92 718 aaKnown RBP3.67□□□□□ -1.82
CCDC7-213ENST00000639290 CRISPLD1Q9H336 500 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 PABPC3Q9H361 631 aaKnown RBP3.67□□□□□ -1.82
CCDC7-213ENST00000639290 LRRN3Q9H3W5 708 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 KAT14Q9H8E8 782 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 DNAJB12Q9NXW2 375 aaKnown RBP3.67□□□□□ -1.82
CCDC7-213ENST00000639290 STIM2Q9P246 746 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 CDC42EP3Q9UKI2 254 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 PILRAQ9UKJ1 303 aa3.67□□□□□ -1.82
CCDC7-213ENST00000639290 WBP11Q9Y2W2 641 aaKnown RBP3.67□□□□□ -1.82
CCDC7-213ENST00000639290 PCDHGC4Q9Y5F7 938 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms