RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 A0A1W2PQH9 124 aa19.22■□□□□ 0.67
CLN5-219ENST00000637537 ARHGEF37A1IGU5 675 aa19.22■□□□□ 0.67
CLN5-219ENST00000637537 CXorf49A8MYA2 514 aaPredicted RBP19.22■□□□□ 0.67
CLN5-219ENST00000637537 STX2P32856 288 aa19.22■□□□□ 0.67
CLN5-219ENST00000637537 GLUD2P49448 558 aa19.22■□□□□ 0.67
CLN5-219ENST00000637537 CCL23P55773 120 aa19.22■□□□□ 0.67
CLN5-219ENST00000637537 SPARCL1Q14515 664 aa19.22■□□□□ 0.67
CLN5-219ENST00000637537 PLEKHG4Q58EX7 1191 aa19.22■□□□□ 0.67
CLN5-219ENST00000637537 TMEM173Q86WV6 379 aaPredicted RBP19.22■□□□□ 0.67
CLN5-219ENST00000637537 CTAGE3PQ8IX95 158 aa19.22■□□□□ 0.67
CLN5-219ENST00000637537 KIF2BQ8N4N8 673 aa19.22■□□□□ 0.67
CLN5-219ENST00000637537 SIGLEC10Q96LC7 697 aa19.22■□□□□ 0.67
CLN5-219ENST00000637537 CASD1Q96PB1 797 aa19.22■□□□□ 0.67
CLN5-219ENST00000637537 GGT7Q9UJ14 662 aa19.22■□□□□ 0.67
CLN5-219ENST00000637537 ADAM28Q9UKQ2 775 aa19.22■□□□□ 0.67
CLN5-219ENST00000637537 SUN1O94901 812 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 USP46P62068 366 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 SMAD1Q15797 465 aaKnown RBP19.21■□□□□ 0.67
CLN5-219ENST00000637537 CTXN3Q4LDR2 81 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 PID1Q7Z2X4 250 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.21■□□□□ 0.67
CLN5-219ENST00000637537 MCUQ8NE86 351 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 AGAP3Q96P47 875 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 FGFR1OP2Q9NVK5 253 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 TTLL3Q9Y4R7 772 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 TMEM189-UBE2V1I3L0A0 370 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 TPSB2P20231 275 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 PAX3P23760 479 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 MAGEA3P43357 314 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 NR1H3Q13133 447 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 BFSP2Q13515 415 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 TPSAB1Q15661 275 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 TRMT10BQ6PF06 316 aaKnown RBP19.21■□□□□ 0.67
CLN5-219ENST00000637537 UNC5AQ6ZN44 842 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 NAF1Q96HR8 494 aaKnown RBP19.21■□□□□ 0.67
CLN5-219ENST00000637537 EPAS1Q99814 870 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 ABCC13Q9NSE7 274 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 PCDH10Q9P2E7 1040 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 SLC27A5Q9Y2P5 690 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 MYO16Q9Y6X6 1858 aa19.21■□□□□ 0.67
CLN5-219ENST00000637537 IRAK2O43187 625 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 UGT1A9O60656 530 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 MOCS2O96007 188 aaPredicted RBP19.2■□□□□ 0.66
CLN5-219ENST00000637537 IGLV3-25P01717 112 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 C1QAP02745 245 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 CA4P22748 312 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 THEMIS2Q5TEJ8 643 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 C4orf22Q6V702 233 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 UNC5BQ8IZJ1 945 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 PPM1NQ8N819 430 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 MZB1Q8WU39 189 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 UGT1A7Q9HAW7 530 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 UGT1A10Q9HAW8 530 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 UGT1A8Q9HAW9 530 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 SMYD2Q9NRG4 433 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 GRID1Q9ULK0 1009 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 SF3B1O75533 1304 aaKnown RBP eCLIP19.2■□□□□ 0.66
CLN5-219ENST00000637537 PATJQ8NI35 1801 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 SESN2P58004 480 aaPredicted RBP19.2■□□□□ 0.66
CLN5-219ENST00000637537 NUGGCQ68CJ6 796 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 DCP1BQ8IZD4 617 aaKnown RBP19.2■□□□□ 0.66
CLN5-219ENST00000637537 CKAP2Q8WWK9 683 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 PLCD4Q9BRC7 762 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 OSBPL1AQ9BXW6 950 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 PPP1R12CQ9BZL4 782 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 RXFP1Q9HBX9 757 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 KLHL8Q9P2G9 620 aaPredicted RBP19.2■□□□□ 0.66
CLN5-219ENST00000637537 LRFN2Q9ULH4 789 aa19.2■□□□□ 0.66
CLN5-219ENST00000637537 OPHN1O60890 802 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 USP12O75317 370 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 STK10O94804 968 aaKnown RBP19.19■□□□□ 0.66
CLN5-219ENST00000637537 PTPN3P26045 913 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 SLC11A1P49279 550 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 FAAP100Q0VG06 881 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 EIF4EBP2Q13542 120 aaPredicted RBP19.19■□□□□ 0.66
CLN5-219ENST00000637537 TAF11Q15544 211 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 CASC4Q6P4E1 433 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 RSPO2Q6UXX9 243 aaPredicted RBP19.19■□□□□ 0.66
CLN5-219ENST00000637537 SCML4Q8N228 414 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 TGS1Q96RS0 853 aaKnown RBP19.19■□□□□ 0.66
CLN5-219ENST00000637537 FRMD8Q9BZ67 464 aaPredicted RBP19.19■□□□□ 0.66
CLN5-219ENST00000637537 MARCH5Q9NX47 278 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 PRKAG3Q9UGI9 489 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 FETUBQ9UGM5 382 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 STK38LQ9Y2H1 464 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 LRRC42Q9Y546 428 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 IKBKGQ9Y6K9 419 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 BPTFQ12830 3046 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 WDR27A2RRH5 827 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 PAGE1O75459 146 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 CCNB1P14635 433 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 FOXN2P32314 431 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 HCAR3P49019 387 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 ZBTB17Q13105 803 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 SLC1A5Q15758 541 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 DEFB128Q7Z7B8 93 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 SLC44A1Q8WWI5 657 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 SPOCK2Q92563 424 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 FAM167BQ9BTA0 163 aa19.19■□□□□ 0.66
CLN5-219ENST00000637537 PPCSQ9HAB8 311 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms