RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 USP39Q53GS9 565 aaKnown RBP6.66□□□□□ -1.34
TCF4-249ENST00000625716 CCDC183Q5T5S1 534 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 NUGGCQ68CJ6 796 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 DENND1BQ6P3S1 775 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 CACNA2D4Q7Z3S7 1137 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 C12orf40Q86WS4 652 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 CCDC117Q8IWD4 279 aaPredicted RBP6.66□□□□□ -1.34
TCF4-249ENST00000625716 UNC45BQ8IWX7 931 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 ALLCQ8N6M5 410 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 ZNF513Q8N8E2 541 aaPredicted RBP6.66□□□□□ -1.34
TCF4-249ENST00000625716 TERB1Q8NA31 727 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 TXNDC5Q8NBS9 432 aaKnown RBP6.66□□□□□ -1.34
TCF4-249ENST00000625716 UCMAQ8WVF2 138 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 SHC3Q92529 594 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 EZH1Q92800 747 aaPredicted RBP6.66□□□□□ -1.34
TCF4-249ENST00000625716 TMA16Q96EY4 203 aaKnown RBP6.66□□□□□ -1.34
TCF4-249ENST00000625716 UBL7Q96S82 380 aaPredicted RBP6.66□□□□□ -1.34
TCF4-249ENST00000625716 DDX50Q9BQ39 737 aaKnown RBP6.66□□□□□ -1.34
TCF4-249ENST00000625716 VPS16Q9H269 839 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 C2orf42Q9NWW7 574 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 PLK2Q9NYY3 685 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 STIM2Q9P246 746 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 SEPT3Q9UH03 358 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 EBF1Q9UH73 591 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 SFMBT1Q9UHJ3 866 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 AGO1Q9UL18 857 aaKnown RBP6.66□□□□□ -1.34
TCF4-249ENST00000625716 RNF112Q9ULX5 631 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 MMP17Q9ULZ9 603 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 TYW5A2RUC4 315 aaKnown RBP6.65□□□□□ -1.34
TCF4-249ENST00000625716 FOXN3O00409 490 aaPredicted RBP6.65□□□□□ -1.34
TCF4-249ENST00000625716 TSPAN3O60637 253 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 RHOBTB1O94844 696 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 LATS1O95835 1130 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 KLKB1P03952 638 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 RETP07949 1114 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 GBP1P32455 592 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 YWHAZP63104 245 aaKnown RBP6.65□□□□□ -1.34
TCF4-249ENST00000625716 MYL5Q02045 173 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 SRSF5Q13243 272 aaKnown RBP6.65□□□□□ -1.34
TCF4-249ENST00000625716 ELF2Q15723 593 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 CRY1Q16526 586 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 EFHC1Q5JVL4 640 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 MIIPQ5JXC2 388 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 EMC10Q5UCC4 262 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 KLHDC7AQ5VTJ3 777 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 ANO7Q6IWH7 933 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 RBM43Q6ZSC3 357 aaKnown RBP6.65□□□□□ -1.34
TCF4-249ENST00000625716 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.65□□□□□ -1.34
TCF4-249ENST00000625716 TMEM110Q86TL2 294 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 C11orf74Q86VG3 221 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 PASD1Q8IV76 773 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 CHPFQ8IZ52 775 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 CPXM2Q8N436 756 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 DCLK2Q8N568 766 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 IL17RCQ8NAC3 791 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 MSANTD4Q8NCY6 345 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 IPO4Q8TEX9 1081 aaKnown RBP6.65□□□□□ -1.34
TCF4-249ENST00000625716 CLEC4CQ8WTT0 213 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 HMGB4Q8WW32 186 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 GAB3Q8WWW8 586 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 RNF34Q969K3 372 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 PPP1R13BQ96KQ4 1090 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 SPACA7Q96KW9 195 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 SERPINB11Q96P15 392 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 ZSWIM1Q9BR11 485 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 LSM14BQ9BX40 385 aaKnown RBP6.65□□□□□ -1.34
TCF4-249ENST00000625716 SLC2A11Q9BYW1 496 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 RBSNQ9H1K0 784 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 LHX5Q9H2C1 402 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 RASSF4Q9H2L5 321 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 POPDC2Q9HBU9 364 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 SRA1Q9HD15 236 aaKnown RBP6.65□□□□□ -1.34
TCF4-249ENST00000625716 ACP6Q9NPH0 428 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 POLR3BQ9NW08 1133 aaPredicted RBP6.65□□□□□ -1.34
TCF4-249ENST00000625716 FANCLQ9NW38 375 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 TAB2Q9NYJ8 693 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 SLC12A6Q9UHW9 1150 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 USP18Q9UMW8 372 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 ANAPC1Q9H1A4 1944 aa6.65□□□□□ -1.34
TCF4-249ENST00000625716 PATJQ8NI35 1801 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 KIF26AQ9ULI4 1882 aaPredicted RBP6.64□□□□□ -1.35
TCF4-249ENST00000625716 HELZP42694 1942 aaKnown RBP6.64□□□□□ -1.35
TCF4-249ENST00000625716 MYH10P35580 1976 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 TRIOO75962 3097 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 TCRBV21S2A2A0A5A6 115 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 SMTNL1A8MU46 457 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 BECN2A8MW95 431 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 E5RJQ4 531 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 SGK1O00141 431 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 NPC1O15118 1278 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 TRIM24O15164 1050 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 IRAK2O43187 625 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 MSI1O43347 362 aaKnown RBP6.64□□□□□ -1.35
TCF4-249ENST00000625716 TIMM44O43615 452 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 FOXD2O60548 495 aaPredicted RBP6.64□□□□□ -1.35
TCF4-249ENST00000625716 PENKP01210 267 aaPredicted RBP6.64□□□□□ -1.35
TCF4-249ENST00000625716 APOEP02649 317 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 SLC2A3P11169 496 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 HOXB2P14652 356 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 UCHL3P15374 230 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms