RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 KRT34O76011 436 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 PDE5AO76074 875 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 UBTFL6P0CB48 400 aaPredicted RBP11.54□□□□□ -0.56
VARS2-213ENST00000625423 CPA3P15088 417 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 ABCG1P45844 678 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 CACNA2D1P54289 1103 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 DSG1Q02413 1049 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 PEX6Q13608 980 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 TMCO4Q5TGY1 634 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 SHCBP1Q8NEM2 672 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 CPNE1Q99829 537 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 OXCT2Q9BYC2 517 aaPredicted RBP11.54□□□□□ -0.56
VARS2-213ENST00000625423 RNF39Q9H2S5 420 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 DNAJC28Q9NX36 388 aa11.54□□□□□ -0.56
VARS2-213ENST00000625423 MAGEA13PA6NCF6 341 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 FAM72CH0Y354 149 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 EEF2KO00418 725 aaKnown RBP11.53□□□□□ -0.56
VARS2-213ENST00000625423 MX2P20592 715 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 GARSP41250 739 aaKnown RBP11.53□□□□□ -0.56
VARS2-213ENST00000625423 SOX4Q06945 474 aaPredicted RBP11.53□□□□□ -0.56
VARS2-213ENST00000625423 USP4Q13107 963 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 GRTP1Q5TC63 336 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 FAM72AQ5TYM5 149 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 FAM72DQ6L9T8 149 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 FAM72BQ86X60 149 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 ZNF669Q96BR6 464 aaPredicted RBP11.53□□□□□ -0.56
VARS2-213ENST00000625423 AGAP2Q99490 1192 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 ECSITQ9BQ95 431 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 KATNBL1Q9H079 304 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 KLHL8Q9P2G9 620 aaPredicted RBP11.53□□□□□ -0.56
VARS2-213ENST00000625423 IGSF9Q9P2J2 1179 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 RBM47A0AV96 593 aaKnown RBP11.53□□□□□ -0.56
VARS2-213ENST00000625423 DAB1O75553 588 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 SNAI1O95863 264 aaPredicted RBP11.53□□□□□ -0.56
VARS2-213ENST00000625423 MMP3P08254 477 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 SMPD1P17405 629 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 ACAT1P24752 427 aaKnown RBP11.53□□□□□ -0.56
VARS2-213ENST00000625423 HARS2P49590 506 aaKnown RBP11.53□□□□□ -0.56
VARS2-213ENST00000625423 RABGGTBP53611 331 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 SPANXN3Q5MJ09 141 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 HFE2Q6ZVN8 426 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 RAPH1Q70E73 1250 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 STRA8Q7Z7C7 330 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 OSTM1Q86WC4 334 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 PSTKQ8IV42 348 aaKnown RBP11.53□□□□□ -0.56
VARS2-213ENST00000625423 PHTF2Q8N3S3 785 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 B3GALNT2Q8NCR0 500 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 ZNF483Q8TF39 744 aaPredicted RBP11.53□□□□□ -0.56
VARS2-213ENST00000625423 CCDC124Q96CT7 223 aaKnown RBP11.53□□□□□ -0.56
VARS2-213ENST00000625423 CDCA5Q96FF9 252 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 NPY6RQ99463 290 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 DDX50Q9BQ39 737 aaKnown RBP11.53□□□□□ -0.56
VARS2-213ENST00000625423 CAB39LQ9H9S4 337 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 MAN1C1Q9NR34 630 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 PIGVQ9NUD9 493 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 DNAJB4Q9UDY4 337 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 ASB3Q9Y575 518 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 FKBP6O75344 327 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 ZMPSTE24O75844 475 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 CD4P01730 458 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 NOS2P35228 1153 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 TAF6P49848 677 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 IRX1P78414 480 aaPredicted RBP11.53□□□□□ -0.56
VARS2-213ENST00000625423 DEUP1Q05D60 604 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 CDC16Q13042 620 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 DPYSQ14117 519 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 PAFAH1B3Q15102 231 aaKnown RBP11.53□□□□□ -0.56
VARS2-213ENST00000625423 DLG2Q15700 870 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 EFCAB3Q8N7B9 438 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 RNF169Q8NCN4 708 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 GPRC5AQ8NFJ5 357 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 ADAM32Q8TC27 787 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 TNIP3Q96KP6 325 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 TSC22D3Q99576 134 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 RBBP8Q99708 897 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 GORASP1Q9BQQ3 440 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 PIDD1Q9HB75 910 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 S100A14Q9HCY8 104 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 GDAP2Q9NXN4 497 aa11.53□□□□□ -0.56
VARS2-213ENST00000625423 DDX43Q9NXZ2 648 aaKnown RBP11.53□□□□□ -0.56
VARS2-213ENST00000625423 DCXO43602 365 aa11.52□□□□□ -0.56
VARS2-213ENST00000625423 HUS1O60921 280 aa11.52□□□□□ -0.56
VARS2-213ENST00000625423 ALOX15P16050 662 aaPredicted RBP11.52□□□□□ -0.56
VARS2-213ENST00000625423 CRABP2P29373 138 aa11.52□□□□□ -0.56
VARS2-213ENST00000625423 GJA5P36382 358 aa11.52□□□□□ -0.56
VARS2-213ENST00000625423 IRF9Q00978 393 aa11.52□□□□□ -0.56
VARS2-213ENST00000625423 LRRC36Q1X8D7 754 aa11.52□□□□□ -0.56
VARS2-213ENST00000625423 FSTL4Q6MZW2 842 aa11.52□□□□□ -0.56
VARS2-213ENST00000625423 NAPRTQ6XQN6 538 aa11.52□□□□□ -0.56
VARS2-213ENST00000625423 APLFQ8IW19 511 aaPredicted RBP11.52□□□□□ -0.56
VARS2-213ENST00000625423 ZNF781Q8N8C0 355 aa11.52□□□□□ -0.56
VARS2-213ENST00000625423 DNAAF3Q8N9W5 541 aa11.52□□□□□ -0.56
VARS2-213ENST00000625423 OR6J1Q8NGC5 347 aa11.52□□□□□ -0.56
VARS2-213ENST00000625423 AGR3Q8TD06 166 aa11.52□□□□□ -0.56
VARS2-213ENST00000625423 SLC26A7Q8TE54 656 aa11.52□□□□□ -0.56
VARS2-213ENST00000625423 NT5C3BQ969T7 300 aa11.52□□□□□ -0.56
VARS2-213ENST00000625423 ZNF560Q96MR9 790 aa11.52□□□□□ -0.56
VARS2-213ENST00000625423 DUSP16Q9BY84 665 aa11.52□□□□□ -0.56
VARS2-213ENST00000625423 FAM96AQ9H5X1 160 aa11.52□□□□□ -0.56
VARS2-213ENST00000625423 LRRC40Q9H9A6 602 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms