RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 HARS2P49590 506 aaKnown RBP14.44□□□□□ -0.1
SNX1-214ENST00000625244 NDST1P52848 882 aa14.44□□□□□ -0.1
SNX1-214ENST00000625244 CYP24A1Q07973 514 aa14.44□□□□□ -0.1
SNX1-214ENST00000625244 RABEP1Q15276 862 aa14.44□□□□□ -0.1
SNX1-214ENST00000625244 TRIP4Q15650 581 aaPredicted RBP14.44□□□□□ -0.1
SNX1-214ENST00000625244 WDR36Q8NI36 951 aaKnown RBP14.44□□□□□ -0.1
SNX1-214ENST00000625244 TTC17Q96AE7 1141 aa14.44□□□□□ -0.1
SNX1-214ENST00000625244 KLHDC7BQ96G42 594 aa14.44□□□□□ -0.1
SNX1-214ENST00000625244 KIAA1586Q9HCI6 787 aa14.44□□□□□ -0.1
SNX1-214ENST00000625244 PNPLA8Q9NP80 782 aa14.44□□□□□ -0.1
SNX1-214ENST00000625244 GEMIN8Q9NWZ8 242 aaKnown RBP14.44□□□□□ -0.1
SNX1-214ENST00000625244 NLGN3Q9NZ94 848 aa14.44□□□□□ -0.1
SNX1-214ENST00000625244 USP3Q9Y6I4 520 aa14.44□□□□□ -0.1
SNX1-214ENST00000625244 TDRD6O60522 2096 aaKnown RBP14.43□□□□□ -0.1
SNX1-214ENST00000625244 DOCK9Q9BZ29 2069 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 CACNA1DQ01668 2161 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 FRMD3A2A2Y4 597 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 TTC34A8MYJ7 566 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 K7ESM1 405 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 NEBLO76041 1014 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 CLSTN1O94985 981 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 ITGA2BP08514 1039 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 ALPPL2P10696 532 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 IDEP14735 1019 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 HOXD13P35453 343 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 LONP1P36776 959 aaKnown RBP14.43□□□□□ -0.1
SNX1-214ENST00000625244 MLLT3P42568 568 aaPredicted RBP14.43□□□□□ -0.1
SNX1-214ENST00000625244 METAP1P53582 386 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 ST8SIA6P61647 398 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 CYP4F2P78329 520 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 KCNMA1Q12791 1236 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 CDKN3Q16667 212 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 ZNF699Q32M78 642 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 ZNF667Q5HYK9 610 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 CRTC1Q6UUV9 634 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.43□□□□□ -0.1
SNX1-214ENST00000625244 RBM44Q6ZP01 1051 aaKnown RBP14.43□□□□□ -0.1
SNX1-214ENST00000625244 PLD4Q96BZ4 506 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 EPSTI1Q96J88 318 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 LMLNQ96KR4 655 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 USP29Q9HBJ7 922 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 STRIP2Q9ULQ0 834 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 DMTF1Q9Y222 760 aa14.43□□□□□ -0.1
SNX1-214ENST00000625244 CPED1A4D0V7 1026 aa14.42□□□□□ -0.1
SNX1-214ENST00000625244 SCAMP1O15126 338 aa14.42□□□□□ -0.1
SNX1-214ENST00000625244 PHACTR2O75167 634 aa14.42□□□□□ -0.1
SNX1-214ENST00000625244 RTN2O75298 545 aa14.42□□□□□ -0.1
SNX1-214ENST00000625244 C5AR1P21730 350 aa14.42□□□□□ -0.1
SNX1-214ENST00000625244 SLC5A2P31639 672 aa14.42□□□□□ -0.1
SNX1-214ENST00000625244 DRD3P35462 400 aa14.42□□□□□ -0.1
SNX1-214ENST00000625244 CSKP41240 450 aa14.42□□□□□ -0.1
SNX1-214ENST00000625244 PDX1P52945 283 aa14.42□□□□□ -0.1
SNX1-214ENST00000625244 ARID5BQ14865 1188 aa14.42□□□□□ -0.1
SNX1-214ENST00000625244 GUSBP11Q6P575 273 aa14.42□□□□□ -0.1
SNX1-214ENST00000625244 RSRC2Q7L4I2 434 aaKnown RBP14.42□□□□□ -0.1
SNX1-214ENST00000625244 EFL1Q7Z2Z2 1120 aaKnown RBP14.42□□□□□ -0.1
SNX1-214ENST00000625244 C14orf80Q86SX3 495 aa14.42□□□□□ -0.1
SNX1-214ENST00000625244 STK40Q8N2I9 435 aa14.42□□□□□ -0.1
SNX1-214ENST00000625244 ZNF564Q8TBZ8 553 aaPredicted RBP14.42□□□□□ -0.1
SNX1-214ENST00000625244 TWNKQ96RR1 684 aa14.42□□□□□ -0.1
SNX1-214ENST00000625244 STOML2Q9UJZ1 356 aa14.42□□□□□ -0.1
SNX1-214ENST00000625244 INTS6Q9UL03 887 aaKnown RBP14.42□□□□□ -0.1
SNX1-214ENST00000625244 PCDHGA4Q9Y5G9 962 aa14.42□□□□□ -0.1
SNX1-214ENST00000625244 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.41□□□□□ -0.1
SNX1-214ENST00000625244 TARSL2A2RTX5 802 aaKnown RBP14.41□□□□□ -0.1
SNX1-214ENST00000625244 PRAMEF26H0Y7S4 382 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 KIF20AO95235 890 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 ADH1BP00325 375 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 WT1P19544 449 aaPredicted RBP14.41□□□□□ -0.1
SNX1-214ENST00000625244 NUDT1P36639 197 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 CTSOP43234 321 aaPredicted RBP14.41□□□□□ -0.1
SNX1-214ENST00000625244 CASP4P49662 377 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 ZNF177Q13360 481 aaPredicted RBP14.41□□□□□ -0.1
SNX1-214ENST00000625244 ZNF542PQ5EBM4 170 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 ADGRF1Q5T601 910 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 SV2BQ7L1I2 683 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 UNC93AQ86WB7 457 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 TMEM145Q8NBT3 493 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 HTR3CQ8WXA8 447 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 FAM131CQ96AQ9 280 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 CYFIP2Q96F07 1278 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 LIN37Q96GY3 246 aaPredicted RBP14.41□□□□□ -0.1
SNX1-214ENST00000625244 MYOCQ99972 504 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 FUCA2Q9BTY2 467 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 PANK4Q9NVE7 773 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 EVA1BQ9NVM1 165 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 PLEKHB1Q9UF11 243 aaPredicted RBP14.41□□□□□ -0.1
SNX1-214ENST00000625244 RP1P56715 2156 aa14.41□□□□□ -0.1
SNX1-214ENST00000625244 CCDC187A0A096LP49 1063 aa14.4□□□□□ -0.1
SNX1-214ENST00000625244 TBL1XO60907 577 aa14.4□□□□□ -0.1
SNX1-214ENST00000625244 IL1BP01584 269 aa14.4□□□□□ -0.1
SNX1-214ENST00000625244 MZF1P28698 734 aaPredicted RBP14.4□□□□□ -0.1
SNX1-214ENST00000625244 CYP2J2P51589 502 aa14.4□□□□□ -0.1
SNX1-214ENST00000625244 ZNF445P59923 1031 aa14.4□□□□□ -0.1
SNX1-214ENST00000625244 BIRC3Q13489 604 aa14.4□□□□□ -0.1
SNX1-214ENST00000625244 NCOA4Q13772 614 aa14.4□□□□□ -0.1
SNX1-214ENST00000625244 DRAP1Q14919 205 aaPredicted RBP14.4□□□□□ -0.1
SNX1-214ENST00000625244 VASH2Q86V25 355 aa14.4□□□□□ -0.1
SNX1-214ENST00000625244 TRIM69Q86WT6 500 aa14.4□□□□□ -0.1
SNX1-214ENST00000625244 PLEKHO2Q8TD55 490 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms