RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 NR1D2Q14995 579 aa15.53■□□□□ 0.08
PMS1-221ENST00000624204 DENND1BQ6P3S1 775 aa15.53■□□□□ 0.08
PMS1-221ENST00000624204 EPGNQ6UW88 154 aa15.53■□□□□ 0.08
PMS1-221ENST00000624204 ZBTB49Q6ZSB9 765 aa15.53■□□□□ 0.08
PMS1-221ENST00000624204 SETD3Q86TU7 594 aaPredicted RBP15.53■□□□□ 0.08
PMS1-221ENST00000624204 CXorf21Q9HAI6 301 aa15.53■□□□□ 0.08
PMS1-221ENST00000624204 CYP26B1Q9NR63 512 aa15.53■□□□□ 0.08
PMS1-221ENST00000624204 PPP1R1BQ9UD71 204 aaPredicted RBP15.53■□□□□ 0.08
PMS1-221ENST00000624204 PSAT1Q9Y617 370 aa15.53■□□□□ 0.08
PMS1-221ENST00000624204 WDR46O15213 610 aaKnown RBP15.52■□□□□ 0.08
PMS1-221ENST00000624204 CST3P01034 146 aaPredicted RBP15.52■□□□□ 0.08
PMS1-221ENST00000624204 ZNF12P17014 697 aa15.52■□□□□ 0.08
PMS1-221ENST00000624204 CD247P20963 164 aa15.52■□□□□ 0.08
PMS1-221ENST00000624204 TRPC3Q13507 836 aa15.52■□□□□ 0.08
PMS1-221ENST00000624204 CYP2A13Q16696 494 aa15.52■□□□□ 0.08
PMS1-221ENST00000624204 LDHDQ86WU2 507 aa15.52■□□□□ 0.08
PMS1-221ENST00000624204 DCLK2Q8N568 766 aa15.52■□□□□ 0.08
PMS1-221ENST00000624204 CISHQ9NSE2 258 aa15.52■□□□□ 0.08
PMS1-221ENST00000624204 AGRPO00253 132 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 ENTPD3O75355 529 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 BCAS2O75934 225 aaPredicted RBP15.52■□□□□ 0.07
PMS1-221ENST00000624204 RAP1GAPP47736 663 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 BCAR1P56945 870 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 TXNL4AP83876 142 aaKnown RBP15.52■□□□□ 0.07
PMS1-221ENST00000624204 TKFCQ3LXA3 575 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 SLC7A5P1Q8MH63 180 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 CDKL2Q92772 493 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 SIGLEC10Q96LC7 697 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 AGO4Q9HCK5 861 aaKnown RBP15.52■□□□□ 0.07
PMS1-221ENST00000624204 FAM32AQ9Y421 112 aaKnown RBP15.52■□□□□ 0.07
PMS1-221ENST00000624204 V9GYQ6 96 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 SPDYE2BA6NHP3 402 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 GOLGA8TH3BQL2 631 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 RPS6KA4O75676 772 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 VAPBO95292 243 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 OXSR1O95747 527 aaPredicted RBP15.52■□□□□ 0.07
PMS1-221ENST00000624204 SPDYE6P0CI01 402 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 MPSTP25325 297 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 CRKP46108 304 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 GNA12Q03113 381 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 LSM12Q3MHD2 195 aaKnown RBP15.52■□□□□ 0.07
PMS1-221ENST00000624204 SPDYE2Q495Y8 402 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 NAPRTQ6XQN6 538 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 TMEM26Q6ZUK4 368 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 CARM1Q86X55 608 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 HIPK3Q9H422 1215 aa15.52■□□□□ 0.07
PMS1-221ENST00000624204 GPC6Q9Y625 555 aaPredicted RBP15.52■□□□□ 0.07
PMS1-221ENST00000624204 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.51■□□□□ 0.07
PMS1-221ENST00000624204 A0A087WXM4 84 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 C1orf232A0A0U1RR37 186 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 SAC3D1A6NKF1 404 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 LSM8O95777 96 aaKnown RBP15.51■□□□□ 0.07
PMS1-221ENST00000624204 CHRNGP07510 517 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 GLRBP48167 497 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 TRAF2Q12933 501 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 TFDP2Q14188 446 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 ZBED5Q49AG3 693 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 MTERF2Q49AM1 385 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 TMEM214Q6NUQ4 689 aaKnown RBP15.51■□□□□ 0.07
PMS1-221ENST00000624204 SLC2A7Q6PXP3 512 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 SH3BP5LQ7L8J4 393 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 C4orf19Q8IY42 314 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 PGAM4Q8N0Y7 254 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 TMEM143Q96AN5 459 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 MSTO1Q9BUK6 570 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 COL20A1Q9P218 1284 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 SLC8A2Q9UPR5 921 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 TNRC6CQ9HCJ0 1690 aaKnown RBP15.51■□□□□ 0.07
PMS1-221ENST00000624204 SYNJ2BP-COX16A0A087WUM0 186 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 A8MU76 341 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 METTL18O95568 372 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 HMGCRP04035 888 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 GNAO1P09471 354 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 CLCN2P51788 898 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 NME3Q13232 169 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 DGKZQ13574 1117 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 AARS2Q5JTZ9 985 aaKnown RBP15.51■□□□□ 0.07
PMS1-221ENST00000624204 KCNT2Q6UVM3 1135 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 TMEM110Q86TL2 294 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 ZNF597Q96LX8 424 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 NAA50Q9GZZ1 169 aaKnown RBP15.51■□□□□ 0.07
PMS1-221ENST00000624204 EFCAB1Q9HAE3 211 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 IL1RL2Q9HB29 575 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 NGRNQ9NPE2 291 aaKnown RBP15.51■□□□□ 0.07
PMS1-221ENST00000624204 GID8Q9NWU2 228 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 COX16Q9P0S2 106 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 ITGB1BP2Q9UKP3 347 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 PCDHB12Q9Y5F1 795 aa15.51■□□□□ 0.07
PMS1-221ENST00000624204 CLRN2A0PK11 232 aa15.5■□□□□ 0.07
PMS1-221ENST00000624204 ALDH2P05091 517 aa15.5■□□□□ 0.07
PMS1-221ENST00000624204 HARS2P49590 506 aaKnown RBP15.5■□□□□ 0.07
PMS1-221ENST00000624204 TFAMQ00059 246 aaKnown RBP15.5■□□□□ 0.07
PMS1-221ENST00000624204 RALGDSQ12967 914 aa15.5■□□□□ 0.07
PMS1-221ENST00000624204 SPIDRQ14159 915 aa15.5■□□□□ 0.07
PMS1-221ENST00000624204 RP9Q8TA86 221 aaKnown RBP15.5■□□□□ 0.07
PMS1-221ENST00000624204 FRMD8Q9BZ67 464 aaPredicted RBP15.5■□□□□ 0.07
PMS1-221ENST00000624204 SDCBP2Q9H190 292 aa15.5■□□□□ 0.07
PMS1-221ENST00000624204 PCDHA11Q9Y5I1 949 aa15.5■□□□□ 0.07
PMS1-221ENST00000624204 SBF2Q86WG5 1849 aa15.5■□□□□ 0.07
PMS1-221ENST00000624204 TCP10L2B9ZVM9 353 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms