RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 PNOCQ13519 176 aa16.77■□□□□ 0.28
CD99-211ENST00000623253 KCNJ12Q14500 433 aa16.77■□□□□ 0.28
CD99-211ENST00000623253 SLC45A4Q5BKX6 768 aa16.77■□□□□ 0.28
CD99-211ENST00000623253 PITRM1Q5JRX3 1037 aa16.77■□□□□ 0.28
CD99-211ENST00000623253 ANKRD40Q6AI12 368 aa16.77■□□□□ 0.28
CD99-211ENST00000623253 UBR7Q8N806 425 aa16.77■□□□□ 0.28
CD99-211ENST00000623253 OR14C36Q8NHC7 312 aa16.77■□□□□ 0.28
CD99-211ENST00000623253 ADAM32Q8TC27 787 aa16.77■□□□□ 0.28
CD99-211ENST00000623253 SAP25Q8TEE9 199 aa16.77■□□□□ 0.28
CD99-211ENST00000623253 NXPE2Q96DL1 559 aa16.77■□□□□ 0.28
CD99-211ENST00000623253 SERAC1Q96JX3 654 aa16.77■□□□□ 0.28
CD99-211ENST00000623253 FCRL2Q96LA5 508 aaPredicted RBP16.77■□□□□ 0.28
CD99-211ENST00000623253 NUCKS1Q9H1E3 243 aaKnown RBP16.77■□□□□ 0.28
CD99-211ENST00000623253 RMND1Q9NWS8 449 aa16.77■□□□□ 0.28
CD99-211ENST00000623253 SLCO3A1Q9UIG8 710 aa16.77■□□□□ 0.28
CD99-211ENST00000623253 FZD4Q9ULV1 537 aa16.77■□□□□ 0.28
CD99-211ENST00000623253 PCDHGA1Q9Y5H4 931 aa16.77■□□□□ 0.28
CD99-211ENST00000623253 TBC1D3DA0A087WVF3 549 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 TBC1D3IA0A087WXS9 549 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 TBC1D3EA0A087X179 549 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 TBC1D3KA0A087X1G2 549 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 EDDM13A0A1B0GTR0 161 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 TARSL2A2RTX5 802 aaKnown RBP16.76■□□□□ 0.27
CD99-211ENST00000623253 TBC1D3FA6NER0 549 aaPredicted RBP16.76■□□□□ 0.27
CD99-211ENST00000623253 TBC1D3LB9A6J9 549 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 IL1BP01584 269 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 TBC1D3HP0C7X1 549 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 ITPKBP27987 946 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 NUCB2P80303 420 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 ECT2LQ008S8 904 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 TARDBPQ13148 414 aaKnown RBP eCLIP16.76■□□□□ 0.27
CD99-211ENST00000623253 SHBQ15464 509 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 CNGA2Q16280 664 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 MS4A13Q5J8X5 152 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 TBC1D3GQ6DHY5 549 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 TBC1D3CQ6IPX1 549 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 LRRC69Q6ZNQ3 347 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 SND1Q7KZF4 910 aaKnown RBP eCLIP16.76■□□□□ 0.278e-17■■□□□ 14
CD99-211ENST00000623253 TBC1D3Q8IZP1 549 aaPredicted RBP16.76■□□□□ 0.27
CD99-211ENST00000623253 STK40Q8N2I9 435 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 PPM1KQ8N3J5 372 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 DQX1Q8TE96 717 aaKnown RBP16.76■□□□□ 0.27
CD99-211ENST00000623253 FAM149B1Q96BN6 582 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 RPL10LQ96L21 214 aaKnown RBP16.76■□□□□ 0.27
CD99-211ENST00000623253 SERPINB11Q96P15 392 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 ZSWIM1Q9BR11 485 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 ST7Q9NRC1 585 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 ADAMTS1Q9UHI8 967 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 NAALADL1Q9UQQ1 740 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 TLR6Q9Y2C9 796 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 ACACAQ13085 2346 aa16.76■□□□□ 0.27
CD99-211ENST00000623253 KNL1Q8NG31 2342 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 URB1O60287 2271 aaKnown RBP16.75■□□□□ 0.27
CD99-211ENST00000623253 RNF225M0QZC1 329 aaPredicted RBP16.75■□□□□ 0.27
CD99-211ENST00000623253 TLR4O00206 839 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 FBXO21O94952 628 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 LUC7L3O95232 432 aaKnown RBP16.75■□□□□ 0.27
CD99-211ENST00000623253 SRPRAP08240 638 aaKnown RBP16.75■□□□□ 0.27
CD99-211ENST00000623253 CDK4P11802 303 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 GOT1P17174 413 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 CCR5P51681 352 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 PMS1P54277 932 aaKnown RBP16.75■□□□□ 0.27
CD99-211ENST00000623253 BNIP3Q12983 259 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 ARID5BQ14865 1188 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 DCAF6Q58WW2 860 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 HES3Q5TGS1 186 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.75■□□□□ 0.27
CD99-211ENST00000623253 APCDD1Q8J025 514 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 LGI2Q8N0V4 545 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 AADATQ8N5Z0 425 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 KDM1BQ8NB78 822 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 SLC35C1Q96A29 364 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 HSFY1Q96LI6 401 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 NT5C1BQ96P26 610 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 FAM129BQ96TA1 746 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 GDPD2Q9HCC8 539 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 TJP2Q9UDY2 1190 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 LOC400499M0QZD8 3231 aa16.75■□□□□ 0.27
CD99-211ENST00000623253 PLXNA2O75051 1894 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 A0A1W2PR77 199 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 TRIM49BA6NDI0 452 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 CAPN9O14815 690 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 YKT6O15498 198 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 ZIC2O95409 532 aaPredicted RBP16.74■□□□□ 0.27
CD99-211ENST00000623253 ADH1BP00325 375 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 FYNP06241 537 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 C1SP09871 688 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 C5AR1P21730 350 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 EPHA8P29322 1005 aaPredicted RBP16.74■□□□□ 0.27
CD99-211ENST00000623253 NNMTP40261 264 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 FMO5P49326 533 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 ACADVLP49748 655 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 ADPRHP54922 357 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 NXPH1P58417 271 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 BECN1Q14457 450 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 STILQ15468 1287 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 ZNF658Q5TYW1 1059 aaPredicted RBP16.74■□□□□ 0.27
CD99-211ENST00000623253 RAP1GAP2Q684P5 730 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 RRAGAQ7L523 313 aa16.74■□□□□ 0.27
CD99-211ENST00000623253 KAT5Q92993 513 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms