RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 TNFSF14O43557 240 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 IL1BP01584 269 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 APOEP02649 317 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 SRPRAP08240 638 aaKnown RBP9.64□□□□□ -0.87
TARDBP-227ENST00000622057 C7P10643 843 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 TACR2P21452 398 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 BMP6P22004 513 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 NNMTP40261 264 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 CTSKP43235 329 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 GRK6P43250 576 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 PSMD8P48556 350 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 CCT8P50990 548 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 RACK1P63244 317 aaKnown RBP9.64□□□□□ -0.87
TARDBP-227ENST00000622057 ECT2LQ008S8 904 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 CST6Q15828 149 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 ELOA2Q8IYF1 753 aaPredicted RBP9.64□□□□□ -0.87
TARDBP-227ENST00000622057 STK40Q8N2I9 435 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 GALNT15Q8N3T1 639 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 ATP6V0D2Q8N8Y2 350 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 OR14C36Q8NHC7 312 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 HNRNPLLQ8WVV9 542 aaKnown RBP9.64□□□□□ -0.87
TARDBP-227ENST00000622057 ZNF606Q8WXB4 792 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 RNF34Q969K3 372 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 SKA1Q96BD8 255 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 MED15Q96RN5 788 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 ORAI3Q9BRQ5 295 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 SLC4A5Q9BY07 1137 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 ACE2Q9BYF1 805 aaPredicted RBP9.64□□□□□ -0.87
TARDBP-227ENST00000622057 INTS2Q9H0H0 1204 aaKnown RBP9.64□□□□□ -0.87
TARDBP-227ENST00000622057 EBF2Q9HAK2 575 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 POPDC2Q9HBU9 364 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 ACP6Q9NPH0 428 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 AASDHPPTQ9NRN7 309 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 COX16Q9P0S2 106 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 SLC12A6Q9UHW9 1150 aa9.64□□□□□ -0.87
TARDBP-227ENST00000622057 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.64□□□□□ -0.87
TARDBP-227ENST00000622057 CEP295Q9C0D2 2601 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 SPEGQ15772 3267 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 TBC1D3DA0A087WVF3 549 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 TBC1D3IA0A087WXS9 549 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 TBC1D3EA0A087X179 549 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 TBC1D3KA0A087X1G2 549 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 A0A1B0GTQ1 180 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 EDDM13A0A1B0GTR0 161 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 TBC1D3FA6NER0 549 aaPredicted RBP9.63□□□□□ -0.87
TARDBP-227ENST00000622057 TRABD2BA6NFA1 517 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 TBC1D3LB9A6J9 549 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 F5H5T6 163 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 VILLO15195 856 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 PAPSS1O43252 624 aaPredicted RBP9.63□□□□□ -0.87
TARDBP-227ENST00000622057 PCDHGA12O60330 932 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 DFNA5O60443 496 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 GNA14O95837 355 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 TRUB2O95900 331 aaKnown RBP9.63□□□□□ -0.87
TARDBP-227ENST00000622057 WNT1P04628 370 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 ITGAVP06756 1048 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 TBC1D3HP0C7X1 549 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 CD38P28907 300 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 GNA15P30679 374 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 USP8P40818 1118 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 RPL34P49207 117 aaKnown RBP9.63□□□□□ -0.87
TARDBP-227ENST00000622057 YWHAZP63104 245 aaKnown RBP9.63□□□□□ -0.87
TARDBP-227ENST00000622057 PITX1P78337 314 aaPredicted RBP9.63□□□□□ -0.87
TARDBP-227ENST00000622057 CYP4F3Q08477 520 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 PAK1Q13153 545 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 NNTQ13423 1086 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 BECN1Q14457 450 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 TAF5Q15542 800 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 ARHGAP44Q17R89 818 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 COL28A1Q2UY09 1125 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 ACCSLQ4AC99 568 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 TBC1D3GQ6DHY5 549 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 TBC1D3CQ6IPX1 549 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 GJB7Q6PEY0 223 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.63□□□□□ -0.87
TARDBP-227ENST00000622057 SND1Q7KZF4 910 aaKnown RBP eCLIP9.63□□□□□ -0.87
TARDBP-227ENST00000622057 TMEM110Q86TL2 294 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 CIR1Q86X95 450 aaPredicted RBP9.63□□□□□ -0.87
TARDBP-227ENST00000622057 GATAD2AQ86YP4 633 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 TRIM59Q8IWR1 403 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 TBC1D3Q8IZP1 549 aaPredicted RBP9.63□□□□□ -0.87
TARDBP-227ENST00000622057 KDM1BQ8NB78 822 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 OR2T34Q8NGX1 318 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 PTPRN2Q92932 1015 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 BTN2A3PQ96KV6 586 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 FAM129BQ96TA1 746 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 ELF4Q99607 663 aaPredicted RBP9.63□□□□□ -0.87
TARDBP-227ENST00000622057 CRACR2AQ9BSW2 395 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 TRIM62Q9BVG3 475 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 THAP9Q9H5L6 903 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.63□□□□□ -0.87
TARDBP-227ENST00000622057 FTSJ1Q9UET6 329 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 CYTH4Q9UIA0 394 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 RAXQ9Y2V3 346 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 GPSM3Q9Y4H4 160 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 AKAP13Q12802 2813 aa9.63□□□□□ -0.87
TARDBP-227ENST00000622057 KCNU1A8MYU2 1149 aa9.62□□□□□ -0.87
TARDBP-227ENST00000622057 WNT9AO14904 365 aa9.62□□□□□ -0.87
TARDBP-227ENST00000622057 GRAP2O75791 330 aa9.62□□□□□ -0.87
TARDBP-227ENST00000622057 FGFR1OPO95684 399 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms