RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 RGS9BPQ6ZS82 235 aa9.44□□□□□ -0.9
GGA3-223ENST00000621870 ZNF513Q8N8E2 541 aaPredicted RBP9.44□□□□□ -0.9
GGA3-223ENST00000621870 RNF157Q96PX1 679 aa9.44□□□□□ -0.9
GGA3-223ENST00000621870 CCT8L2Q96SF2 557 aa9.44□□□□□ -0.9
GGA3-223ENST00000621870 LGMNQ99538 433 aa9.44□□□□□ -0.9
GGA3-223ENST00000621870 ING2Q9H160 280 aa9.44□□□□□ -0.9
GGA3-223ENST00000621870 UNC93B1Q9H1C4 597 aa9.44□□□□□ -0.9
GGA3-223ENST00000621870 C11orf49Q9H6J7 331 aa9.44□□□□□ -0.9
GGA3-223ENST00000621870 COPS7BQ9H9Q2 264 aaPredicted RBP9.44□□□□□ -0.9
GGA3-223ENST00000621870 HPS4Q9NQG7 708 aa9.44□□□□□ -0.9
GGA3-223ENST00000621870 WRAP73Q9P2S5 460 aaPredicted RBP9.44□□□□□ -0.9
GGA3-223ENST00000621870 DEC1Q9P2X7 70 aa9.44□□□□□ -0.9
GGA3-223ENST00000621870 GTF2IRD1Q9UHL9 959 aa9.44□□□□□ -0.9
GGA3-223ENST00000621870 FAM50BQ9Y247 325 aa9.44□□□□□ -0.9
GGA3-223ENST00000621870 TDRKHQ9Y2W6 561 aaKnown RBP9.44□□□□□ -0.9
GGA3-223ENST00000621870 PCDHB9Q9Y5E1 797 aa9.44□□□□□ -0.9
GGA3-223ENST00000621870 CHD2O14647 1828 aaKnown RBP9.44□□□□□ -0.9
GGA3-223ENST00000621870 BRWD1Q9NSI6 2320 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 FAM95CA0A1B0GW59 222 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 DNALI1O14645 258 aaPredicted RBP9.43□□□□□ -0.9
GGA3-223ENST00000621870 FGF10O15520 208 aaPredicted RBP9.43□□□□□ -0.9
GGA3-223ENST00000621870 FKBP9O95302 570 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 ATP6V1E1P36543 226 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 ZNF135P52742 658 aaPredicted RBP9.43□□□□□ -0.9
GGA3-223ENST00000621870 FSTL1Q12841 308 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 XRCC4Q13426 336 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 SLC35G1Q2M3R5 365 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 FKBP9P1Q75LS8 142 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 SKA1Q96BD8 255 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 ERP27Q96DN0 273 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 B3GALT6Q96L58 329 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 SERPINB12Q96P63 405 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 PRPF18Q99633 342 aaKnown RBP9.43□□□□□ -0.9
GGA3-223ENST00000621870 TCF25Q9BQ70 676 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 CCDC3Q9BQI4 270 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 MRPL1Q9BYD6 325 aaKnown RBP9.43□□□□□ -0.9
GGA3-223ENST00000621870 RNF39Q9H2S5 420 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 MANSC1Q9H8J5 431 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 VIPAS39Q9H9C1 493 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 RGS18Q9NS28 235 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 GIMAP4Q9NUV9 329 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 ZNF112Q9UJU3 913 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 ANGPTL2Q9UKU9 493 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 DERAQ9Y315 318 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 A0A1W2PQH9 124 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 NEDD8-MDP1E9PL57 170 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 PJA2O43164 708 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 C8AP07357 584 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 CCNB1P14635 433 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 GPC1P35052 558 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 PGM1P36871 562 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 SERPINB8P50452 374 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 PLK1P53350 603 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 SLC5A3P53794 718 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 PFKPQ01813 784 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 CDC16Q13042 620 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 TAF11Q15544 211 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 GDF6Q6KF10 455 aaPredicted RBP9.43□□□□□ -0.9
GGA3-223ENST00000621870 IRF2BP2Q7Z5L9 587 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 KCNMB4Q86W47 210 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 HJURPQ8NCD3 748 aaPredicted RBP9.43□□□□□ -0.9
GGA3-223ENST00000621870 HDAC7Q8WUI4 952 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 KLHL5Q96PQ7 755 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 MLPHQ9BV36 600 aaPredicted RBP9.43□□□□□ -0.9
GGA3-223ENST00000621870 PRKD2Q9BZL6 878 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 NRDE2Q9H7Z3 1164 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 AASDHPPTQ9NRN7 309 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 TMEM161AQ9NX61 479 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 UNCXA6NJT0 531 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 CHUKO15111 745 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 MGEA5O60502 916 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 APOA4P06727 396 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 CLTBP09497 229 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 PYGBP11216 843 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 NFKB1P19838 968 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 MMP8P22894 467 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 CPA2P48052 419 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 GALNTL6Q49A17 601 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 NEPROQ6NW34 567 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 USP45Q70EL2 814 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 PRUNE1Q86TP1 453 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 FAM124AQ86V42 546 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 TMEM192Q8IY95 271 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 KATNAL2Q8IYT4 538 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 OR52K1Q8NGK4 314 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 MYCBPAPQ8TBZ2 947 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 FZD8Q9H461 694 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 MRPL40Q9NQ50 206 aaKnown RBP9.43□□□□□ -0.9
GGA3-223ENST00000621870 TAS2R13Q9NYV9 303 aa9.43□□□□□ -0.9
GGA3-223ENST00000621870 FAM32AQ9Y421 112 aaKnown RBP9.43□□□□□ -0.9
GGA3-223ENST00000621870 TPRP12270 2363 aaKnown RBP9.43□□□□□ -0.9
GGA3-223ENST00000621870 NRXN3Q9Y4C0 1643 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 A0A0U1RQJ8 604 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 MAGEB16A2A368 324 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 CILPO75339 1184 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 SH3BGRLO75368 114 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 C4BPAP04003 597 aaKnown RBP9.42□□□□□ -0.9
GGA3-223ENST00000621870 ETS1P14921 441 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 ADRA1BP35368 520 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 GP5P40197 560 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms