RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 FBRSQ9HAH7 460 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 ANLNQ9NQW6 1124 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 PIGVQ9NUD9 493 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.72■□□□□ 0.43
HMGN3-203ENST00000620514 SUSD2Q9UGT4 822 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 SLCO3A1Q9UIG8 710 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 HS3ST4Q9Y661 456 aa17.72■□□□□ 0.43
HMGN3-203ENST00000620514 EPHB6O15197 1021 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 PAGE1O75459 146 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 MOCS3O95396 460 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 ADCY5O95622 1261 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 DNTTP04053 509 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 GNSP15586 552 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 PDGFRAP16234 1089 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 CSRP1P21291 193 aaKnown RBP17.71■□□□□ 0.43
HMGN3-203ENST00000620514 MZF1P28698 734 aaPredicted RBP17.71■□□□□ 0.43
HMGN3-203ENST00000620514 GABRB2P47870 512 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 STK19P49842 368 aaPredicted RBP17.71■□□□□ 0.43
HMGN3-203ENST00000620514 ECT2LQ008S8 904 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 AUHQ13825 339 aaKnown RBP17.71■□□□□ 0.43
HMGN3-203ENST00000620514 RABGAP1LQ5R372 815 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 C9orf64Q5T6V5 341 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 ZNF776Q68DI1 518 aaPredicted RBP17.71■□□□□ 0.43
HMGN3-203ENST00000620514 CXorf57Q6NSI4 855 aaKnown RBP17.71■□□□□ 0.43
HMGN3-203ENST00000620514 SASS6Q6UVJ0 657 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 ERICH1Q86X53 443 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 XYLT1Q86Y38 959 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 ZDHHC17Q8IUH5 632 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 EPS8L1Q8TE68 723 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 SLC20A1Q8WUM9 679 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 CPA5Q8WXQ8 436 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 C18orf8Q96DM3 657 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 RPL10LQ96L21 214 aaKnown RBP17.71■□□□□ 0.43
HMGN3-203ENST00000620514 RPRD1AQ96P16 312 aaPredicted RBP17.71■□□□□ 0.43
HMGN3-203ENST00000620514 RSPH9Q9H1X1 276 aaPredicted RBP17.71■□□□□ 0.43
HMGN3-203ENST00000620514 FAM207AQ9NSI2 230 aaPredicted RBP17.71■□□□□ 0.43
HMGN3-203ENST00000620514 EIF2B4Q9UI10 523 aaKnown RBP17.71■□□□□ 0.43
HMGN3-203ENST00000620514 VANGL2Q9ULK5 521 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 SLCO1B1Q9Y6L6 691 aa17.71■□□□□ 0.43
HMGN3-203ENST00000620514 A0A1B0GTW7 788 aa17.7■□□□□ 0.42
HMGN3-203ENST00000620514 A0A1B0GVM2 712 aa17.7■□□□□ 0.42
HMGN3-203ENST00000620514 TCAF2A6NFQ2 919 aa17.7■□□□□ 0.42
HMGN3-203ENST00000620514 GOLGA8SH3BPF8 625 aa17.7■□□□□ 0.42
HMGN3-203ENST00000620514 I6L893 689 aaPredicted RBP17.7■□□□□ 0.42
HMGN3-203ENST00000620514 GFPT2O94808 682 aa17.7■□□□□ 0.42
HMGN3-203ENST00000620514 SRPRAP08240 638 aaKnown RBP17.7■□□□□ 0.42
HMGN3-203ENST00000620514 SULT1E1P49888 294 aa17.7■□□□□ 0.42
HMGN3-203ENST00000620514 POLR2FP61218 127 aaKnown RBP17.7■□□□□ 0.42
HMGN3-203ENST00000620514 NOMO3P69849 1222 aa17.7■□□□□ 0.42
HMGN3-203ENST00000620514 ZBTB16Q05516 673 aa17.7■□□□□ 0.42
HMGN3-203ENST00000620514 ZNF252P-AS1Q0IIN9 211 aa17.7■□□□□ 0.42
HMGN3-203ENST00000620514 FAM102AQ5T9C2 384 aaPredicted RBP17.7■□□□□ 0.42
HMGN3-203ENST00000620514 NAA35Q5VZE5 725 aa17.7■□□□□ 0.42
HMGN3-203ENST00000620514 TRNP1Q6NT89 227 aa17.7■□□□□ 0.42
HMGN3-203ENST00000620514 KDM1BQ8NB78 822 aa17.7■□□□□ 0.42
HMGN3-203ENST00000620514 OR52K2Q8NGK3 314 aa17.7■□□□□ 0.42
HMGN3-203ENST00000620514 SIK2Q9H0K1 926 aa17.7■□□□□ 0.42
HMGN3-203ENST00000620514 NLRC4Q9NPP4 1024 aa17.7■□□□□ 0.42
HMGN3-203ENST00000620514 ANO10Q9NW15 660 aa17.7■□□□□ 0.42
HMGN3-203ENST00000620514 NOCTQ9UK39 431 aaKnown RBP17.7■□□□□ 0.42
HMGN3-203ENST00000620514 SNX10Q9Y5X0 201 aa17.7■□□□□ 0.42
HMGN3-203ENST00000620514 OPHN1O60890 802 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 LSM8O95777 96 aaKnown RBP17.69■□□□□ 0.42
HMGN3-203ENST00000620514 SYPP08247 313 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 CEACAM1P13688 526 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 FLT3P36888 993 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 CXCR3P49682 368 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 COPB1P53618 953 aaKnown RBP17.69■□□□□ 0.42
HMGN3-203ENST00000620514 GRIK2Q13002 908 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 SEMA3BQ13214 749 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 ARID5BQ14865 1188 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 TTC31Q49AM3 519 aaPredicted RBP17.69■□□□□ 0.42
HMGN3-203ENST00000620514 FKBP15Q5T1M5 1219 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 TTC39BQ5VTQ0 682 aaPredicted RBP17.69■□□□□ 0.42
HMGN3-203ENST00000620514 PIP4P1Q86T03 277 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 HDDC3Q8N4P3 179 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 C1orf216Q8TAB5 229 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 SNX19Q92543 992 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 NT5C3BQ969T7 300 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 ALG14Q96F25 216 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 TBCBQ99426 244 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 BTBD1Q9H0C5 482 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 TKTL2Q9H0I9 626 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 PABPC3Q9H361 631 aaKnown RBP17.69■□□□□ 0.42
HMGN3-203ENST00000620514 TMPRSS4Q9NRS4 437 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 ARHGEF38Q9NXL2 777 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 RRN3Q9NYV6 651 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 SERGEFQ9UGK8 458 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 SIK3Q9Y2K2 1263 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 ITIH6Q6UXX5 1313 aa17.69■□□□□ 0.42
HMGN3-203ENST00000620514 TPRP12270 2363 aaKnown RBP17.68■□□□□ 0.42
HMGN3-203ENST00000620514 EDDM13A0A1B0GTR0 161 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 GOLGA6L22H0YM25 854 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 BCAT2O15382 392 aaPredicted RBP17.68■□□□□ 0.42
HMGN3-203ENST00000620514 CNTN5O94779 1100 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 SEMA4FO95754 770 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 TPM2P07951 284 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 VAV1P15498 845 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 CHRNB2P17787 502 aa17.68■□□□□ 0.42
HMGN3-203ENST00000620514 SCNN1AP37088 669 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms