RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 PCDH19Q8TAB3 1148 aa13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 TRAPPC12Q8WVT3 735 aa13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 FRMD8P1Q9BZ68 369 aaPredicted RBP13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 BFARQ9NZS9 450 aa13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 ZNF70Q9UC06 446 aaPredicted RBP13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 J3QRK9 145 aa13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 LTFP02788 710 aa13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 TCF7P36402 384 aaPredicted RBP13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 MTTPP55157 894 aa13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 XIAPP98170 497 aa13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 PCLAFQ15004 111 aa13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 LSM12Q3MHD2 195 aaKnown RBP13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 BOLA3Q53S33 107 aa13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 FAM183BPQ6ZVS7 135 aa13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 OR52K1Q8NGK4 314 aa13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 USP33Q8TEY7 942 aa13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 GAB3Q8WWW8 586 aa13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 FBXL8Q96CD0 374 aa13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 TRPC7Q9HCX4 862 aa13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 IARS2Q9NSE4 1012 aaKnown RBP13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 SYBUQ9NX95 663 aa13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 PPP1R1BQ9UD71 204 aaPredicted RBP13.55□□□□□ -0.24
CYFIP1-211ENST00000619348 MT-ND1P03886 318 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 HDCP19113 662 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 PSMB4P28070 264 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 TRAF2Q12933 501 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 CHST15Q7LFX5 561 aaPredicted RBP13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 AGAP2Q99490 1192 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 CDH19Q9H159 772 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 SDCBP2Q9H190 292 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 NMRAL1Q9HBL8 299 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 PTPRHQ9HD43 1115 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 TIMMDC1Q9NPL8 285 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 USP21Q9UK80 565 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 TSPAN16Q9UKR8 245 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 RUVBL2Q9Y230 463 aaKnown RBP13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 PCDHA11Q9Y5I1 949 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 KCNU1A8MYU2 1149 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 TMEM233B4DJY2 109 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 SMIM18P0DKX4 95 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 EEF1DP29692 281 aaKnown RBP13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 EIF2B2P49770 351 aaKnown RBP13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 C21orf59P57076 290 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 ITGADQ13349 1161 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 GOLGA7BQ2TAP0 167 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 KBTBD6Q86V97 674 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 BRSK2Q8IWQ3 736 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 CLEC4DQ8WXI8 215 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 HSFX1Q9UBD0 423 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 MFHAS1Q9Y4C4 1052 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 SNX9Q9Y5X1 595 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 SCN7AQ01118 1682 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 OGTO15294 1046 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 B4GALT5O43286 388 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 VAPBO95292 243 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 LYPLA2O95372 231 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 HNRNPLP14866 589 aaKnown RBP eCLIP13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 GP5P40197 560 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 GRIA4P48058 902 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 HSD17B4P51659 736 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 B3GNT9Q6UX72 402 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 OFCC1Q8IZS5 231 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 MPHOSPH6Q99547 160 aaKnown RBP13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 SLC39A3Q9BRY0 314 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 RTKNQ9BST9 563 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 GATA5Q9BWX5 397 aaPredicted RBP13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 RMI1Q9H9A7 625 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 PCDH18Q9HCL0 1135 aa13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 TRNAU1APQ9NX07 287 aaKnown RBP13.54□□□□□ -0.24
CYFIP1-211ENST00000619348 C3orf70A6NLC5 250 aaPredicted RBP13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 PEX10O60683 326 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 SNNO75324 88 aaPredicted RBP13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 RNASEH2AO75792 299 aaKnown RBP13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 OATP04181 439 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 GRIA3P42263 894 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 NAMPTP43490 491 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 ZNF143P52747 638 aaPredicted RBP13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 SNAPC2Q13487 334 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 CEACAM7Q14002 265 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 HNRNPDQ14103 355 aaKnown RBP13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 ANKDD1AQ495B1 522 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 ARL13AQ5H913 290 aaPredicted RBP13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 DUS1LQ6P1R4 473 aaKnown RBP13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 C15orf39Q6ZRI6 1047 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 ZNF410Q86VK4 478 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 WDR49Q8IV35 697 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 CMASQ8NFW8 434 aaPredicted RBP13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 SIGLEC10Q96LC7 697 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 NTPCRQ9BSD7 190 aaKnown RBP13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 FRMD8Q9BZ67 464 aaPredicted RBP13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 EGFL7Q9UHF1 273 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 HES2Q9Y543 173 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 RREB1Q92766 1687 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 TRIM43BA6NCK2 446 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 PDLIM1O00151 329 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 RNF103O00237 685 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 CDH2P19022 906 aaPredicted RBP13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 NDST1P52848 882 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 MAVSQ7Z434 540 aa13.53□□□□□ -0.24
CYFIP1-211ENST00000619348 RBM12BQ8IXT5 1001 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms