RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 TCEA3O75764 348 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 PIAS2O75928 621 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 C4BPAP04003 597 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 CLTAP09496 248 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 MAT2AP31153 395 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 TAF6P49848 677 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 MCL1Q07820 350 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 ESPL1Q14674 2120 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 SLC45A4Q5BKX6 768 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 NUGGCQ68CJ6 796 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 NAPEPLDQ6IQ20 393 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 CATSPER3Q86XQ3 398 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 BLIDQ8IZY5 108 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 ZNF295-AS1Q8N0V1 137 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 MFSD2AQ8NA29 543 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 USP7Q93009 1102 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 MYLPFQ96A32 169 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 TP53INP1Q96A56 240 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 PIWIL1Q96J94 861 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 PPP1R13BQ96KQ4 1090 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 ACBD6Q9BR61 282 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 SSBP4Q9BWG4 385 aaPredicted RBP7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 SLC26A6Q9BXS9 759 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 PABPC3Q9H361 631 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 GSX1Q9H4S2 264 aaPredicted RBP7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 FBXL12Q9NXK8 326 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 ZDHHC3Q9NYG2 299 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 ARHGAP28Q9P2N2 729 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 CHORDC1Q9UHD1 332 aaPredicted RBP7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 SLC27A6Q9Y2P4 619 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 SCN1AP35498 2009 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 STAB1Q9NY15 2570 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 SHANK1Q9Y566 2161 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 ARHGEF35A5YM69 484 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 KPNA7A9QM74 516 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 F8VP50 259 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 SLC27A2O14975 620 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 NPC1O15118 1278 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 MID1O15344 667 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 SLC16A4O15374 487 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 XPOTO43592 962 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 FAM189A1O60320 539 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 RNASEH2AO75792 299 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 TBX18O95935 607 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 JMJD7P0C870 316 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 XRCC6P12956 609 aaKnown RBP eCLIP7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 OAS2P29728 719 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 MATR3P43243 847 aaKnown RBP eCLIP7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 MAGEA11P43364 429 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 KRTAP10-9P60411 292 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 DEFB109BQ30KR1 87 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 TTC31Q49AM3 519 aaPredicted RBP7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 FNDC3BQ53EP0 1204 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 DCAF6Q58WW2 860 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 EARS2Q5JPH6 523 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 FYB2Q5VWT5 728 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 ASB18Q6ZVZ8 466 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 HTR3DQ70Z44 454 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 NEK8Q86SG6 692 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 ZC3H3Q8IXZ2 948 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 DAW1Q8N136 415 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 OR2T34Q8NGX1 318 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 UCMAQ8WVF2 138 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 GTF3C6Q969F1 213 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 FAM84AQ96KN4 292 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 C5orf34Q96MH7 638 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 AIFM3Q96NN9 605 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 DUSP9Q99956 384 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 MYOCQ99972 504 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 C22orf23Q9BZE7 217 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 CCSER1Q9C0I3 900 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 CRTAC1Q9NQ79 661 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 ARHGAP20Q9P2F6 1191 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 LOXL2Q9Y4K0 774 aa7.2□□□□□ -1.26
SCAMP1-206ENST00000618166 EME2A4GXA9 379 aaPredicted RBP7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 LRRC72A6NJI9 287 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 CNTN5O94779 1100 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 ALPPL2P10696 532 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 CCR5P51681 352 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 ARSDP51689 593 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 MAPK10P53779 464 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 NOP14P78316 857 aaKnown RBP7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 EXOSC10Q01780 885 aaKnown RBP7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 NRG1Q02297 640 aaPredicted RBP7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 ZBTB16Q05516 673 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 SPIDRQ14159 915 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 TMEM132DQ14C87 1099 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 NTRK3Q16288 839 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 SMTNL2Q2TAL5 461 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 NADK2Q4G0N4 442 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 HECTD3Q5T447 861 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 ZNF776Q68DI1 518 aaPredicted RBP7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 C20orf204Q6ZNR8 217 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 ANKS1BQ7Z6G8 1248 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 DSG4Q86SJ6 1040 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 APOBEC4Q8WW27 367 aaKnown RBP7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 NKD1Q969G9 470 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 PMEPA1Q969W9 287 aa7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 FUBP3Q96I24 572 aaKnown RBP eCLIP7.19□□□□□ -1.26
SCAMP1-206ENST00000618166 CCDC3Q9BQI4 270 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms