RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 ZNF33AQ06730 810 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 NCBP2-AS2Q69YL0 99 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 PYROXD2Q8N2H3 581 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 FAM71DQ8N9W8 422 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 CCNYQ8ND76 341 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 FBXO25Q8TCJ0 367 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 GPR152Q8TDT2 470 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 PPP1R2P1Q96PQ5 205 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 QKIQ96PU8 341 aaKnown RBP eCLIP17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 PHACTR1Q9C0D0 580 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 HAUS2Q9NVX0 235 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 GRHL1Q9NZI5 618 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 SAE1Q9UBE0 346 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 HPCAL4Q9UM19 191 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 INSL5Q9Y5Q6 135 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 IRAK3Q9Y616 596 aa17.27■□□□□ 0.36
TRAPPC3-210ENST00000617904 PLXNA3P51805 1871 aa17.27■□□□□ 0.35
TRAPPC3-210ENST00000617904 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 TEX28O15482 410 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 ADAM12O43184 909 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 PAGE1O75459 146 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 MOCS2O96007 188 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 IFFO1Q0D2I5 559 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 TWF1Q12792 350 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 SEMA3BQ13214 749 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 EIF4EBP2Q13542 120 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 DPYSQ14117 519 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 DENND2CQ68D51 928 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 NPNTQ6UXI9 565 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 LRIG3Q6UXM1 1119 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 ARHGEF18Q6ZSZ5 1173 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 CENPUQ71F23 418 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 TMC3Q7Z5M5 1100 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 MIB1Q86YT6 1006 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 PLD4Q96BZ4 506 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 RTP4Q96DX8 246 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 FCRL2Q96LA5 508 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 TTC25Q96NG3 672 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 CCDC77Q9BR77 488 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 ADAM33Q9BZ11 813 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 CALCOCO1Q9P1Z2 691 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 ATP8A1Q9Y2Q0 1164 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 NEU2Q9Y3R4 380 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 MYO16Q9Y6X6 1858 aa17.26■□□□□ 0.35
TRAPPC3-210ENST00000617904 GOLGA6CA6NDK9 693 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 E7EVH7 732 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 DCLK1O15075 740 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 PPFIA2O75334 1257 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 NEBLO76041 1014 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 SEC24AO95486 1093 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 VNN2O95498 520 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 GLUD1P00367 558 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 GOLGA6DP0CG33 693 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 SRGAP2BP0DMP2 458 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 FDFT1P37268 417 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 MLLT6P55198 1093 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 ARL4CP56559 192 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 AP1B1Q10567 949 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 TIGD7Q6NT04 549 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 CCDC25Q86WR0 208 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 MRPL43Q8N983 215 aaKnown RBP17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 HTR3CQ8WXA8 447 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 MRPS31Q92665 395 aaKnown RBP17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 PSMG2Q969U7 264 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 SLC39A13Q96H72 371 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 GDAP1L1Q96MZ0 367 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 VAT1Q99536 393 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 APOL5Q9BWW9 433 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 CRISPLD1Q9H336 500 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 GOLGA6AQ9NYA3 693 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 DTLQ9NZJ0 730 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 PIEZO1Q92508 2521 aa17.25■□□□□ 0.35
TRAPPC3-210ENST00000617904 ZNF840PA6NDX5 716 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 C5orf60A6NFR6 353 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 C2orf71A6NGG8 1288 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 EIF3HO15372 352 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 MSI1O43347 362 aaKnown RBP17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 OPHN1O60890 802 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 GCATO75600 419 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 LRIG2O94898 1065 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 FAM153BP0C7A2 387 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 HOXB8P17481 243 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 PFKLP17858 780 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 RBL1P28749 1068 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 ECHS1P30084 290 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 LMAN1P49257 510 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 BASP1P80723 227 aaKnown RBP17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 GBE1Q04446 702 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 FAM153CQ494X1 144 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 ITPRIPL1Q6GPH6 555 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 HIBCHQ6NVY1 386 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 ZCCHC9Q8N567 271 aaKnown RBP17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 PBXIP1Q96AQ6 731 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 KLHL5Q96PQ7 755 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 ZYG11BQ9C0D3 744 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 PPARGC1AQ9UBK2 798 aaKnown RBP17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 FAM153AQ9UHL3 310 aa17.24■□□□□ 0.35
TRAPPC3-210ENST00000617904 GOLGA8KD6RF30 607 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 E9PAM4 449 aa17.23■□□□□ 0.35
TRAPPC3-210ENST00000617904 CHADO15335 359 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms