RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 RAB42Q8N4Z0 105 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 RBM15BQ8NDT2 890 aaKnown RBP10.47□□□□□ -0.73
CUL4A-212ENST00000617546 SLC7A14Q8TBB6 771 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 UBA3Q8TBC4 463 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 ZNF317Q96PQ6 595 aaPredicted RBP10.47□□□□□ -0.73
CUL4A-212ENST00000617546 TJP2Q9UDY2 1190 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 GNPTGQ9UJJ9 305 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 IPPQ9Y573 584 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 hCG_1818297A0A087WSY0 165 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 FGRP09769 529 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 UMPSP11172 480 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 LBPP18428 481 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 ATP5F1P24539 256 aaPredicted RBP10.47□□□□□ -0.73
CUL4A-212ENST00000617546 NRF1Q16656 503 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 DCAF6Q58WW2 860 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 RINLQ6ZS11 566 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 TBC1D19Q8N5T2 526 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 TARS2Q9BW92 718 aaKnown RBP10.47□□□□□ -0.73
CUL4A-212ENST00000617546 TMEM216Q9P0N5 145 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 LEF1Q9UJU2 399 aaPredicted RBP10.47□□□□□ -0.73
CUL4A-212ENST00000617546 RECQLP46063 649 aaPredicted RBP10.47□□□□□ -0.73
CUL4A-212ENST00000617546 MST1RQ04912 1400 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 INO80DQ53TQ3 878 aaPredicted RBP10.47□□□□□ -0.73
CUL4A-212ENST00000617546 LIPMQ5VYY2 423 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 PKN3Q6P5Z2 889 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 CYP4Z2PQ8N1L4 340 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 RNF145Q96MT1 663 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 GPR101Q96P66 508 aaPredicted RBP10.47□□□□□ -0.73
CUL4A-212ENST00000617546 GINS4Q9BRT9 223 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 TEX13BQ9BXU2 312 aa10.47□□□□□ -0.73
CUL4A-212ENST00000617546 DNAAF2Q9NVR5 837 aaKnown RBP10.47□□□□□ -0.73
CUL4A-212ENST00000617546 E2F8A0AVK6 867 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 PEX11AO75192 247 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 VAPBO95292 243 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 HMGCRP04035 888 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 C6orf222P0C671 652 aaPredicted RBP10.46□□□□□ -0.73
CUL4A-212ENST00000617546 ETS2P15036 469 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 PCSK2P16519 638 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 SLC26A3P40879 764 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 MZT2AQ6P582 158 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 HDDC2Q7Z4H3 204 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 SULF1Q8IWU6 871 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 LZTR1Q8N653 840 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 EMC1Q8N766 993 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 OR56A4Q8NGH8 313 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 EBNA1BP2Q99848 306 aaKnown RBP10.46□□□□□ -0.73
CUL4A-212ENST00000617546 TRMOQ9BU70 441 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 IL22Q9GZX6 179 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 KRT84Q9NSB2 600 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 V9GYQ6 96 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.46□□□□□ -0.73
CUL4A-212ENST00000617546 GNL1P36915 607 aaPredicted RBP10.46□□□□□ -0.73
CUL4A-212ENST00000617546 FMO1Q01740 532 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 KHDC1Q4VXA5 237 aaKnown RBP10.46□□□□□ -0.73
CUL4A-212ENST00000617546 PTRHD1Q6GMV3 140 aaKnown RBP10.46□□□□□ -0.73
CUL4A-212ENST00000617546 ZPBP2Q6X784 338 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 C1orf186Q6ZWK4 172 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 GSTCDQ8NEC7 633 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 SKA1Q96BD8 255 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 ASIC4Q96FT7 647 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 CHST12Q9NRB3 414 aa10.46□□□□□ -0.73
CUL4A-212ENST00000617546 UBQLN1Q9UMX0 589 aaKnown RBP10.46□□□□□ -0.73
CUL4A-212ENST00000617546 C2orf81A6NN90 581 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 POLRMTO00411 1230 aaKnown RBP10.46□□□□□ -0.74
CUL4A-212ENST00000617546 HS6ST1O60243 411 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 DNAJA2O60884 412 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 JAM2P57087 298 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 ACTR3P61158 418 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 TYSND1Q2T9J0 566 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 GPR107Q5VW38 600 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 OTOP1Q7RTM1 612 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 ALYREFQ86V81 257 aaKnown RBP10.46□□□□□ -0.74
CUL4A-212ENST00000617546 POC5Q8NA72 575 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 CHST13Q8NET6 341 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 NUAK2Q9H093 628 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 SEMA6AQ9H2E6 1030 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 TMEM59LQ9UK28 342 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 DHRS12A0PJE2 317 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 TK2O00142 265 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 CABYRO75952 493 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 SLITRK3O94933 977 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 COL6A2P12110 1019 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 MLNP12872 115 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 AVPR1AP37288 418 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 IREB2P48200 963 aaKnown RBP10.46□□□□□ -0.74
CUL4A-212ENST00000617546 ARHGAP17Q68EM7 881 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 C10orf82Q8WW14 230 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 QKIQ96PU8 341 aaKnown RBP eCLIP10.46□□□□□ -0.74
CUL4A-212ENST00000617546 C1orf21Q9H246 121 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 RNPEPQ9H4A4 650 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 GNEQ9Y223 722 aaKnown RBP10.46□□□□□ -0.74
CUL4A-212ENST00000617546 STXBP5LQ9Y2K9 1186 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 DISP2A7MBM2 1401 aa10.46□□□□□ -0.74
CUL4A-212ENST00000617546 SPDYE5A6NIY4 337 aa10.45□□□□□ -0.74
CUL4A-212ENST00000617546 PRR5-ARHGAP8B1AHC4 643 aa10.45□□□□□ -0.74
CUL4A-212ENST00000617546 GRAP2O75791 330 aa10.45□□□□□ -0.74
CUL4A-212ENST00000617546 TSPAN9O75954 239 aa10.45□□□□□ -0.74
CUL4A-212ENST00000617546 PKNOX1P55347 436 aa10.45□□□□□ -0.74
CUL4A-212ENST00000617546 ARHGAP8P85298 464 aa10.45□□□□□ -0.74
CUL4A-212ENST00000617546 PPATQ06203 517 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms