RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 NFKBIZQ9BYH8 718 aa14.86□□□□□ -0.03
SHROOM1-208ENST00000617339 FAM105AQ9NUU6 356 aa14.86□□□□□ -0.03
SHROOM1-208ENST00000617339 NDE1Q9NXR1 346 aa14.86□□□□□ -0.03
SHROOM1-208ENST00000617339 STX18Q9P2W9 335 aaKnown RBP14.86□□□□□ -0.03
SHROOM1-208ENST00000617339 SHOC2Q9UQ13 582 aa14.86□□□□□ -0.03
SHROOM1-208ENST00000617339 PTPRFP10586 1907 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 MFSD11O43934 449 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 FAM200BP0CF97 657 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 L1CAMP32004 1257 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 SNX16P57768 344 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 DSG1Q02413 1049 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 C1orf146Q5VVC0 180 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 PPP1R14CQ8TAE6 165 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 SHKBP1Q8TBC3 707 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 PPP1R36Q96LQ0 422 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 ZNF560Q96MR9 790 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 TSSK1BQ9BXA7 367 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 STARD7Q9NQZ5 370 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 PPARGC1AQ9UBK2 798 aaKnown RBP14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 ANGPTL2Q9UKU9 493 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 BRCA1P38398 1863 aaKnown RBP14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 UNC80Q8N2C7 3258 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 MEI4A8MW99 385 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 MYL2P10916 166 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 BGNP21810 368 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 INHBCP55103 352 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 ITKQ08881 620 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 MYBPC3Q14896 1274 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 TRPV1Q8NER1 839 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 MOCOSQ96EN8 888 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 MMADHCQ9H3L0 296 aaPredicted RBP14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 PRDM12Q9H4Q4 367 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 USP29Q9HBJ7 922 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 PIGVQ9NUD9 493 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 DDX18Q9NVP1 670 aaKnown RBP14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 ABI2Q9NYB9 513 aaPredicted RBP14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 ATXN10Q9UBB4 475 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 FAM237BA0A1B0GVD1 139 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 ARHGAP42A6NI28 874 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 MSI1O43347 362 aaKnown RBP14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 CIB2O75838 187 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 ANPEPP15144 967 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 PURAQ00577 322 aaKnown RBP14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 SV2CQ496J9 727 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 RASSF3Q86WH2 238 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 RASAL3Q86YV0 1011 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 MTG1Q9BT17 334 aaPredicted RBP14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 MANSC1Q9H8J5 431 aa14.85□□□□□ -0.03
SHROOM1-208ENST00000617339 DFFAO00273 331 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 FCHO1O14526 889 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 SOAT2O75908 522 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 SLC4A1P02730 911 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 STIP1P31948 543 aaKnown RBP14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 ENPEPQ07075 957 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 TMED1Q13445 227 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 RIPOR1Q6ZS17 1223 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 TMEM110Q86TL2 294 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 SATL1Q86VE3 508 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 SPATA24Q86W54 205 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 ST13P4Q8IZP2 240 aaPredicted RBP14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 COLGALT1Q8NBJ5 622 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 FERMT1Q9BQL6 677 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 SAR1AQ9NR31 198 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 DTLQ9NZJ0 730 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 SFMBT1Q9UHJ3 866 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 PADI3Q9ULW8 664 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 SMG5Q9UPR3 1016 aaKnown RBP14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 ARL5CA6NH57 179 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 TMEM88BA6NKF7 163 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 NT5C1B-RDH14C9J2C7 533 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 PSMB4P28070 264 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 CCND3P30281 292 aaPredicted RBP14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 CCL23P55773 120 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 KCNA10Q16322 511 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 TIGD5Q53EQ6 642 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 FNIP1Q8TF40 1166 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 PYDC1Q8WXC3 89 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 AZIN2Q96A70 460 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 TTC25Q96NG3 672 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 PHF12Q96QT6 1004 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 ECSITQ9BQ95 431 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 SLC4A5Q9BY07 1137 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 NMUR2Q9GZQ4 415 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 FAM192AQ9GZU8 254 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 CRTAC1Q9NQ79 661 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 PPM1HQ9ULR3 514 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 GON4LQ3T8J9 2241 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 EEF2KO00418 725 aaKnown RBP14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 MGAT1P26572 445 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 C6orf163Q5TEZ5 329 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 LPCAT4Q643R3 524 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 RGS9BPQ6ZS82 235 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 RAPH1Q70E73 1250 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 PCGF5Q86SE9 256 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 SOCS4Q8WXH5 440 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 TRIB2Q92519 343 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 CCDC124Q96CT7 223 aaKnown RBP14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 DTNBP1Q96EV8 351 aa14.84□□□□□ -0.03
SHROOM1-208ENST00000617339 ZBBXA8MT70 800 aa14.83□□□□□ -0.04
SHROOM1-208ENST00000617339 PIRO00625 290 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms