RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 HNRNPLP14866 589 aaKnown RBP eCLIP15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 EDNRBP24530 442 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 CDH13P55290 713 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 TMEM259Q4ZIN3 620 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 PRSS55Q6UWB4 352 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 ESAMQ96AP7 390 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 SMARCD1Q96GM5 515 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 HBEGFQ99075 208 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 COLEC11Q9BWP8 271 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 DMAP1Q9NPF5 467 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 MCM3APO60318 1980 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 A0A1W2PQH9 124 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 PRR23AA6NEV1 266 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 FCHO1O14526 889 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 CD86P42081 329 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 LHX1P48742 406 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 SLC25A3Q00325 362 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 PTPRCAPQ14761 206 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 ZNF280DQ6N043 979 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 ARHGAP36Q6ZRI8 547 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 SPATA24Q86W54 205 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 RAB3IL1Q8TBN0 382 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 APOL5Q9BWW9 433 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 KCNH4Q9UQ05 1017 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 KIAA1551Q9HCM1 1747 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 TTC3P53804 2025 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 ANP32DO95626 131 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 CHRM3P20309 590 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 SLC10A2Q12908 348 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 ZRANB3Q5FWF4 1079 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 ZNF280BQ86YH2 543 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 GALNT4Q8N4A0 578 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 CARNMT1Q8N4J0 409 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 TTC8Q8TAM2 541 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 OSBPL1AQ9BXW6 950 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 ADAM7Q9H2U9 754 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 WDR55Q9H6Y2 383 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 PNPOQ9NVS9 261 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 WDR70Q9NW82 654 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 GRID1Q9ULK0 1009 aa15.16■□□□□ 0.02
TNFRSF11A-206ENST00000617039 SPRP35270 261 aaPredicted RBP15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 SP3Q02447 781 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 RCN1Q15293 331 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 CLEC20AQ6ZU45 233 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 ZNF572Q7Z3I7 529 aaPredicted RBP15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 KCNMB4Q86W47 210 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 SLC41A1Q8IVJ1 513 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 ARHGAP24Q8N264 748 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 YIPF3Q9GZM5 350 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 SENP1Q9P0U3 644 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 IPO11Q9UI26 975 aaKnown RBP15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 PSAT1Q9Y617 370 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 E5RI56 91 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 RALBP11234 206 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 GALNT3Q14435 633 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 ZNF697Q5TEC3 545 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 TRNP1Q6NT89 227 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 DENND6AQ8IWF6 608 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 ZNF567Q8N184 647 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 LHX5Q9H2C1 402 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 RABGEF1Q9UJ41 708 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 LGR5O75473 907 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 ZWINTO95229 277 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 SLC8A1P32418 973 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 PTPN7P35236 360 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 NAPRTQ6XQN6 538 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 SPATA17Q96L03 361 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 CATSPER2Q96P56 530 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 FAM96AQ9H5X1 160 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 XAB2Q9HCS7 855 aaKnown RBP15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 DNAJB4Q9UDY4 337 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 CIDEBQ9UHD4 219 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 ANGPTL3Q9Y5C1 460 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 ATP8B3O60423 1300 aa15.15■□□□□ 0.02
TNFRSF11A-206ENST00000617039 A0A0A0MRY4 1105 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 OR51F1A6NGY5 319 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 PAGE1O75459 146 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 UBTFL6P0CB48 400 aaPredicted RBP15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 ZCCHC18P0CG32 403 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 CACNA2D1P54289 1103 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 TAC4Q86UU9 113 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 LGI2Q8N0V4 545 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 GBP7Q8N8V2 638 aaPredicted RBP15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 OR52K2Q8NGK3 314 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 AGAP11Q8TF27 550 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 KCTD4Q8WVF5 259 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 SEC14L1Q92503 715 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 FGD4Q96M96 766 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 ZNF778Q96MU6 729 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 SPATA13Q96N96 652 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 NOP53Q9NZM5 478 aaKnown RBP15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 PCDHGC3Q9UN70 934 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 STYXL1Q9Y6J8 313 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 CLUHO75153 1309 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 NEMP2A6NFY4 417 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 EPHA3P29320 983 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 OR1D2P34982 312 aa15.14■□□□□ 0.01
TNFRSF11A-206ENST00000617039 TBX4P57082 545 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms