RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 ABCC13Q9NSE7 274 aa15.42■□□□□ 0.06
UBXN1-218ENST00000616865 ASNSD1Q9NWL6 643 aa15.42■□□□□ 0.06
UBXN1-218ENST00000616865 INTUQ9ULD6 942 aa15.42■□□□□ 0.06
UBXN1-218ENST00000616865 STARD13Q9Y3M8 1113 aa15.42■□□□□ 0.06
UBXN1-218ENST00000616865 AKAP13Q12802 2813 aa15.42■□□□□ 0.06
UBXN1-218ENST00000616865 SPAARA0A1B0GVQ0 90 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 A0A1W2PQF6 199 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 TRIM24O15164 1050 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 SERPINF2P08697 491 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 NCAM1P13591 858 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 RARGP13631 454 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 NTSR1P30989 418 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 ZNF33AQ06730 810 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 GRAMD4Q6IC98 578 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 SLC26A9Q7LBE3 791 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 RABEPKQ7Z6M1 372 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 MIB1Q86YT6 1006 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 HDDC3Q8N4P3 179 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 ZCCHC14Q8WYQ9 949 aaKnown RBP15.41■□□□□ 0.06
UBXN1-218ENST00000616865 EDEM1Q92611 657 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 GTPBP2Q9BX10 602 aaKnown RBP15.41■□□□□ 0.06
UBXN1-218ENST00000616865 PACSIN1Q9BY11 444 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 POPDC2Q9HBU9 364 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 OLA1Q9NTK5 396 aaKnown RBP15.41■□□□□ 0.06
UBXN1-218ENST00000616865 CTTNBP2NLQ9P2B4 639 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 NENFQ9UMX5 172 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 IGF2RP11717 2491 aa15.41■□□□□ 0.06
UBXN1-218ENST00000616865 IGHV1OR15-9A0A0B4J2B8 117 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 TLR5O60602 858 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 ZNF217O75362 1048 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 DAB1O75553 588 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 CCDC175P0C221 793 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 NDUFV2P19404 249 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 WASP42768 502 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 GSCP56915 257 aaPredicted RBP15.4■□□□□ 0.06
UBXN1-218ENST00000616865 SIM1P81133 766 aaPredicted RBP15.4■□□□□ 0.06
UBXN1-218ENST00000616865 TAF5Q15542 800 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 DCAF6Q58WW2 860 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 C10orf120Q5SQS8 335 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 EGFLAMQ63HQ2 1017 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 SCD5Q86SK9 330 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 MINDY1Q8N5J2 469 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 DEFB119Q8N690 84 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 MCEEQ96PE7 176 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 NMUR1Q9HB89 426 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 CD248Q9HCU0 757 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 DNAJC17Q9NVM6 304 aaKnown RBP15.4■□□□□ 0.06
UBXN1-218ENST00000616865 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.4■□□□□ 0.06
UBXN1-218ENST00000616865 CLIC5Q9NZA1 410 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 KLK13Q9UKR3 277 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 MSRB2Q9Y3D2 182 aa15.4■□□□□ 0.06
UBXN1-218ENST00000616865 CACNA1GO43497 2377 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 SIGLEC16A6NMB1 481 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 SRRM3A6NNA2 597 aaPredicted RBP15.39■□□□□ 0.05
UBXN1-218ENST00000616865 NEDD8-MDP1E9PL57 170 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 CACNG3O60359 315 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 GREM1O60565 184 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 OPHN1O60890 802 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 GJB6O95452 261 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 CYP1A2P05177 515 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 ATP5C1P36542 298 aaKnown RBP15.39■□□□□ 0.05
UBXN1-218ENST00000616865 NOP2P46087 812 aaKnown RBP15.39■□□□□ 0.05
UBXN1-218ENST00000616865 PGFP49763 221 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 VAV2P52735 878 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 NAP1L1P55209 391 aaKnown RBP15.39■□□□□ 0.05
UBXN1-218ENST00000616865 KIF5AQ12840 1032 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 PLEKHA7Q6IQ23 1121 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 HTR3DQ70Z44 454 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 BHLHA9Q7RTU4 235 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 SLC41A1Q8IVJ1 513 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 RHOT2Q8IXI1 618 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 CHPFQ8IZ52 775 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 DEFB106AQ8N104 65 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 ARHGEF26Q96DR7 871 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 PIWIL1Q96J94 861 aaKnown RBP15.39■□□□□ 0.05
UBXN1-218ENST00000616865 HSPA12BQ96MM6 686 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 XPO6Q96QU8 1125 aaKnown RBP15.39■□□□□ 0.05
UBXN1-218ENST00000616865 ACOX2Q99424 681 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 GABRG3Q99928 467 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 NUP85Q9BW27 656 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 BBS2Q9BXC9 721 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 KCNF1Q9H3M0 494 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.39■□□□□ 0.05
UBXN1-218ENST00000616865 MARK1Q9P0L2 795 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 UVRAGQ9P2Y5 699 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 STAP1Q9ULZ2 295 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 CYP8B1Q9UNU6 501 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 ADGRG1Q9Y653 693 aa15.39■□□□□ 0.05
UBXN1-218ENST00000616865 PRRT4C9JH25 899 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 H0Y626 953 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 TRIM16O95361 564 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 TYRP14679 529 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 PDGFRAP16234 1089 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 GPD1P21695 349 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 SDC4P31431 198 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 NOS2P35228 1153 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 MATKP42679 507 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 EFEMP1Q12805 493 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 MAMLD1Q13495 774 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 SDE2Q6IQ49 451 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms