RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, human

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FMR1-216	ENST00000616614	CLDN11	O75508	207 aa		32.78	■■■□□ 2.84
FMR1-216	ENST00000616614	PCK1	P35558	622 aa		32.78	■■■□□ 2.84
FMR1-216	ENST00000616614	AIF1	P55008	147 aa		32.78	■■■□□ 2.84
FMR1-216	ENST00000616614	APCDD1	Q8J025	514 aa		32.78	■■■□□ 2.84
FMR1-216	ENST00000616614	AHI1	Q8N157	1196 aa		32.78	■■■□□ 2.84
FMR1-216	ENST00000616614	ZNF557	Q8N988	423 aa	Predicted RBP	32.78	■■■□□ 2.84
FMR1-216	ENST00000616614	TXNDC5	Q8NBS9	432 aa	Known RBP	32.78	■■■□□ 2.84
FMR1-216	ENST00000616614	KCNV2	Q8TDN2	545 aa		32.78	■■■□□ 2.84
FMR1-216	ENST00000616614	SNRNP25	Q9BV90	132 aa	Known RBP	32.78	■■■□□ 2.84
FMR1-216	ENST00000616614	CIPC	Q9C0C6	399 aa		32.78	■■■□□ 2.84
FMR1-216	ENST00000616614	KIAA1522	Q9P206	1035 aa	Predicted RBP	32.78	■■■□□ 2.84
FMR1-216	ENST00000616614	USP18	Q9UMW8	372 aa		32.78	■■■□□ 2.84
FMR1-216	ENST00000616614	MZF1	P28698	734 aa	Predicted RBP	32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	L1CAM	P32004	1257 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	CSK	P41240	450 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	NUMB	P49757	651 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	CCR3	P51677	355 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	SEMA3B	Q13214	749 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	MBLAC2	Q68D91	279 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	TXNRD3NB	Q6F5E7	133 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	SYT13	Q7L8C5	426 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	TFAP2D	Q7Z6R9	452 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	WFIKKN2	Q8TEU8	576 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	ZYG11B	Q9C0D3	744 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	MMP17	Q9ULZ9	603 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	TBC1D30	Q9Y2I9	924 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	WASH3P	C4AMC7	463 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614		K7ESF4	209 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	PRPSAP2	O60256	369 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	TDGF1	P13385	188 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	HNRNPL	P14866	589 aa	Known RBP eCLIP	32.77	■■■□□ 2.84	2e-6	■■■□□ 16.6
FMR1-216	ENST00000616614	WAS	P42768	502 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	ZNF177	Q13360	481 aa	Predicted RBP	32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	EIF4H	Q15056	248 aa	Known RBP	32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	SPA17	Q15506	151 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	ERMARD	Q5T6L9	678 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	CCDC117	Q8IWD4	279 aa	Predicted RBP	32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	CYB5D2	Q8WUJ1	264 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	RFFL	Q8WZ73	363 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	ALG14	Q96F25	216 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	AP4E1	Q9UPM8	1137 aa		32.77	■■■□□ 2.84
FMR1-216	ENST00000616614	RCCD1	A6NED2	376 aa		32.76	■■■□□ 2.83
FMR1-216	ENST00000616614	MTA2	O94776	668 aa		32.76	■■■□□ 2.83
FMR1-216	ENST00000616614	PROSC	O94903	275 aa		32.76	■■■□□ 2.83
FMR1-216	ENST00000616614	CSTF1	Q05048	431 aa	Known RBP	32.76	■■■□□ 2.83
FMR1-216	ENST00000616614	DMC1	Q14565	340 aa		32.76	■■■□□ 2.83
FMR1-216	ENST00000616614	TCEAL1	Q15170	157 aa		32.76	■■■□□ 2.83
FMR1-216	ENST00000616614	PITRM1	Q5JRX3	1037 aa		32.76	■■■□□ 2.83
FMR1-216	ENST00000616614	TMEM92	Q6UXU6	159 aa		32.76	■■■□□ 2.83
FMR1-216	ENST00000616614	CACNA2D2	Q9NY47	1150 aa		32.76	■■■□□ 2.83
FMR1-216	ENST00000616614	THAP10	Q9P2Z0	257 aa	Predicted RBP	32.76	■■■□□ 2.83
FMR1-216	ENST00000616614	OR51B4	Q9Y5P0	310 aa		32.76	■■■□□ 2.83
FMR1-216	ENST00000616614	ATG2B	Q96BY7	2078 aa		32.76	■■■□□ 2.83
FMR1-216	ENST00000616614		H0Y858	1186 aa		32.75	■■■□□ 2.83
FMR1-216	ENST00000616614	TIMM44	O43615	452 aa		32.75	■■■□□ 2.83
FMR1-216	ENST00000616614	PAPSS2	O95340	614 aa	Predicted RBP	32.75	■■■□□ 2.83
FMR1-216	ENST00000616614	PTPRN	Q16849	979 aa		32.75	■■■□□ 2.83
FMR1-216	ENST00000616614	KCNT1	Q5JUK3	1230 aa		32.75	■■■□□ 2.83
FMR1-216	ENST00000616614	RWDD4	Q6NW29	188 aa	Known RBP	32.75	■■■□□ 2.83
FMR1-216	ENST00000616614	NLRP14	Q86W24	1093 aa		32.75	■■■□□ 2.83
FMR1-216	ENST00000616614	ACRBP	Q8NEB7	543 aa		32.75	■■■□□ 2.83
FMR1-216	ENST00000616614	TTC17	Q96AE7	1141 aa		32.75	■■■□□ 2.83
FMR1-216	ENST00000616614	ACD	Q96AP0	544 aa		32.75	■■■□□ 2.83
FMR1-216	ENST00000616614	NDFIP2	Q9NV92	336 aa		32.75	■■■□□ 2.83
FMR1-216	ENST00000616614	COL9A1	P20849	921 aa		32.74	■■■□□ 2.83
FMR1-216	ENST00000616614	GSDMD	P57764	484 aa		32.74	■■■□□ 2.83
FMR1-216	ENST00000616614	SLC25A11	Q02978	314 aa	Known RBP	32.74	■■■□□ 2.83
FMR1-216	ENST00000616614	PLEKHG6	Q3KR16	790 aa		32.74	■■■□□ 2.83
FMR1-216	ENST00000616614	HSF5	Q4G112	596 aa	Predicted RBP	32.74	■■■□□ 2.83
FMR1-216	ENST00000616614	RHOT2	Q8IXI1	618 aa		32.74	■■■□□ 2.83
FMR1-216	ENST00000616614	CHPF	Q8IZ52	775 aa		32.74	■■■□□ 2.83
FMR1-216	ENST00000616614	TBC1D31	Q96DN5	1066 aa		32.74	■■■□□ 2.83
FMR1-216	ENST00000616614	KCTD15	Q96SI1	283 aa	Predicted RBP	32.74	■■■□□ 2.83
FMR1-216	ENST00000616614	NCAPG	Q9BPX3	1015 aa		32.74	■■■□□ 2.83
FMR1-216	ENST00000616614	DHX35	Q9H5Z1	703 aa	Known RBP	32.74	■■■□□ 2.83
FMR1-216	ENST00000616614	ZWILCH	Q9H900	591 aa		32.74	■■■□□ 2.83
FMR1-216	ENST00000616614	FBXO4	Q9UKT5	387 aa		32.74	■■■□□ 2.83
FMR1-216	ENST00000616614	GOLGA6L6	A8MZA4	724 aa		32.73	■■■□□ 2.83
FMR1-216	ENST00000616614	CREB3	O43889	395 aa		32.73	■■■□□ 2.83
FMR1-216	ENST00000616614	SP9	P0CG40	484 aa		32.73	■■■□□ 2.83
FMR1-216	ENST00000616614	NTSR1	P30989	418 aa		32.73	■■■□□ 2.83
FMR1-216	ENST00000616614	IL12RB1	P42701	662 aa		32.73	■■■□□ 2.83
FMR1-216	ENST00000616614	CTSO	P43234	321 aa	Predicted RBP	32.73	■■■□□ 2.83
FMR1-216	ENST00000616614	DMWD	Q09019	674 aa		32.73	■■■□□ 2.83
FMR1-216	ENST00000616614	ENPP2	Q13822	863 aa		32.73	■■■□□ 2.83
FMR1-216	ENST00000616614	ZNF234	Q14588	700 aa		32.73	■■■□□ 2.83
FMR1-216	ENST00000616614	CRY1	Q16526	586 aa		32.73	■■■□□ 2.83
FMR1-216	ENST00000616614	SMTNL2	Q2TAL5	461 aa		32.73	■■■□□ 2.83
FMR1-216	ENST00000616614	PRRX2	Q99811	253 aa		32.73	■■■□□ 2.83
FMR1-216	ENST00000616614	FEM1A	Q9BSK4	669 aa		32.73	■■■□□ 2.83
FMR1-216	ENST00000616614	CACNA1I	Q9P0X4	2223 aa		32.73	■■■□□ 2.83
FMR1-216	ENST00000616614	TMEM110-MUSTN1	A8MSY1	372 aa		32.72	■■■□□ 2.83
FMR1-216	ENST00000616614	POLR2E	P19388	210 aa	Known RBP	32.72	■■■□□ 2.83
FMR1-216	ENST00000616614	PLK1	P53350	603 aa		32.72	■■■□□ 2.83
FMR1-216	ENST00000616614	MESD	Q14696	234 aa		32.72	■■■□□ 2.83
FMR1-216	ENST00000616614	RNF219	Q5W0B1	726 aa	Predicted RBP	32.72	■■■□□ 2.83
FMR1-216	ENST00000616614	GABRG3	Q99928	467 aa		32.72	■■■□□ 2.83
FMR1-216	ENST00000616614	SLC8A2	Q9UPR5	921 aa		32.72	■■■□□ 2.83
FMR1-216	ENST00000616614	HCN4	Q9Y3Q4	1203 aa		32.72	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms