RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 RXRBP28702 533 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 JAM2P57087 298 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 FMO1Q01740 532 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 USP10Q14694 798 aaKnown RBP13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 TNFAIP8L3Q5GJ75 292 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 ARCQ7LC44 396 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 SAMD3Q8N6K7 520 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 RMDN1Q96DB5 314 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 FAM20AQ96MK3 541 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 NYXQ9GZU5 481 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 ZDHHC7Q9NXF8 308 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 ASTN1O14525 1302 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 F8VP50 259 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 CYP1A2P05177 515 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 CSF1RP07333 972 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 PPP3CAQ08209 521 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 HNRNPDQ14103 355 aaKnown RBP13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 PON2Q15165 354 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 ZCCHC8Q6NZY4 707 aaKnown RBP13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 CYP2U1Q7Z449 544 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 HACE1Q8IYU2 909 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 MTMR9Q96QG7 549 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 SYNPO2Q9UMS6 1093 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 WBP11Q9Y2W2 641 aaKnown RBP13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 LAMA4Q16363 1823 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 DENND3A2RUS2 1198 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 EIF3DO15371 548 aaKnown RBP eCLIP13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 PIGNO95427 931 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 ALAS1P13196 640 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 EMP3P54852 163 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 YWHAHQ04917 246 aaPredicted RBP13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 PIGHQ14442 188 aaPredicted RBP13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 ARMCX4Q5H9R4 360 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 CYB5RLQ6IPT4 315 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 LRRC49Q8IUZ0 686 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 RP9Q8TA86 221 aaKnown RBP13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 SLC44A1Q8WWI5 657 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 MTERF3Q96E29 417 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 APBA2Q99767 749 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 C1orf21Q9H246 121 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 CACNA2D2Q9NY47 1150 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 MYH4Q9Y623 1939 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 SF3B1O75533 1304 aaKnown RBP eCLIP13.82□□□□□ -0.22e-8■■■■■ 57.4
PPP4R3B-205ENST00000616288 TPP1O14773 563 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 TRIM13O60858 407 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 AMHP03971 560 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 SPRP35270 261 aaPredicted RBP13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 SLC18A1P54219 525 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 OSTNP61366 133 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 RPS8P62241 208 aaKnown RBP13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 TFAMQ00059 246 aaKnown RBP13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 FASTKQ14296 549 aaKnown RBP13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 QRICH1Q2TAL8 776 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 GPR180Q86V85 440 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 CPXCR1Q8N123 301 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 PHF21AQ96BD5 680 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 ZHX1-C8orf76Q96EF9 292 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 VCPIP1Q96JH7 1222 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 ADSLP30566 484 aaPredicted RBP13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 AVPR1AP37288 418 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 ARHGDIAP52565 204 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 GPX6P59796 221 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 SLC13A2Q13183 592 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 AASDHQ4L235 1098 aaPredicted RBP13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 SAMD4BQ5PRF9 694 aaKnown RBP13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 OGFRL1Q5TC84 451 aaPredicted RBP13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 C16orf62Q7Z3J2 963 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 GALNT12Q8IXK2 581 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 RAB2BQ8WUD1 216 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 FAR2Q96K12 515 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 GLT1D1Q96MS3 346 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 TMEM246Q9BRR3 403 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 LXNQ9BS40 222 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 ROGDIQ9GZN7 287 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 SENP6Q9GZR1 1112 aaPredicted RBP13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 EPS8L2Q9H6S3 715 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 CYP4F12Q9HCS2 524 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 SSU72Q9NP77 194 aaKnown RBP13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 ERGIC3Q9Y282 383 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 A2ML1A8K2U0 1454 aa13.82□□□□□ -0.2
PPP4R3B-205ENST00000616288 NOS1APO75052 506 aaPredicted RBP13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 HSMCR30P0CW71 290 aa13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 LRPAP1P30533 357 aa13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 SLC9A3P48764 834 aa13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 IDH3AP50213 366 aa13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 GAD2Q05329 585 aa13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 CES3Q6UWW8 571 aa13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 ENOSF1Q7L5Y1 443 aa13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 ARMC8Q8IUR7 673 aa13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 LILRB4Q8NHJ6 448 aa13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 FAM86B1E9PN63 330 aa13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 BUD23O43709 281 aaKnown RBP13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 NRP2O60462 931 aa13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 LTKP29376 864 aa13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 CDKL1Q00532 357 aa13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 SLC18A2Q05940 514 aa13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 MMRN1Q13201 1228 aa13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 RAB39AQ14964 217 aa13.81□□□□□ -0.2
PPP4R3B-205ENST00000616288 TTC39CQ8N584 583 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms