RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 CYP4Z1Q86W10 505 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 LGI2Q8N0V4 545 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 ZSWIM2Q8NEG5 633 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 SPATA17Q96L03 361 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 PRRG3Q9BZD7 231 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 POLR1EQ9GZS1 481 aaKnown RBP9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 MAGEA13PA6NCF6 341 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 TISP43B9A030 160 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 GRIK3Q13003 919 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 MMRN1Q13201 1228 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 PKN2Q16513 984 aaKnown RBP9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 FBXO39Q8N4B4 442 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 SLC39A8Q9C0K1 460 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 SAR1AQ9NR31 198 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 NDUFA13Q9P0J0 144 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 HAO1Q9UJM8 370 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 AKAP6Q13023 2319 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 KRT8P05787 483 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 FAM153BP0C7A2 387 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 CRYBB1P53674 252 aaPredicted RBP9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 RUNX1T1Q06455 604 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 FAM153CQ494X1 144 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 CCDC149Q6ZUS6 474 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 GALNT4Q8N4A0 578 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 APOL2Q9BQE5 337 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 LHX5Q9H2C1 402 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 CDHR5Q9HBB8 845 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 POLE3Q9NRF9 147 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 AHSPQ9NZD4 102 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 OR12D3Q9UGF7 316 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 ITM2BQ9Y287 266 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 GIT1Q9Y2X7 761 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 TNPO3Q9Y5L0 923 aaKnown RBP9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 NUP98P52948 1817 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 LOC100653049A0A140TA62 436 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 ARHGEF9O43307 516 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 KRT34O76011 436 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 USP1O94782 785 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 NUDT17P0C025 328 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 ITGB5P18084 799 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 RRM2P31350 389 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 FMO1Q01740 532 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 ZACNQ401N2 412 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 CCDC33Q8N5R6 958 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 MAGEB10Q96LZ2 347 aaPredicted RBP9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 COPS7BQ9H9Q2 264 aaPredicted RBP9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 TAS2R14Q9NYV8 317 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 YBX3P16989 372 aaKnown RBP eCLIP9.31□□□□□ -0.921e-7■■■□□ 18.1
SPTBN1-207ENST00000615901 HLA-DPA1P20036 260 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 ATP4AP20648 1035 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 GRM5P41594 1212 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 POLR2LP62875 67 aaKnown RBP9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 TBL3Q12788 808 aaKnown RBP9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 XRCC4Q13426 336 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 GLT6D1Q7Z4J2 308 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 CATSPERZQ9NTU4 200 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 STK39Q9UEW8 545 aa9.31□□□□□ -0.92
SPTBN1-207ENST00000615901 SLC9A3R1O14745 358 aaPredicted RBP9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 PBX1P40424 430 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 CSE1LP55060 971 aaKnown RBP9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 STARD3Q14849 445 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 LRRC36Q1X8D7 754 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 ZFP1Q6P2D0 407 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 PALB2Q86YC2 1186 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 PANX3Q96QZ0 392 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 GNG14A0A1W2PPG7 69 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 F8VP50 259 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 MAP2K7O14733 419 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 MLH1P40692 756 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 ANKRD23Q86SG2 305 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 TCP10LQ8TDR4 215 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 CDT1Q9H211 546 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 ATP11BQ9Y2G3 1177 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 ESPL1Q14674 2120 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 SMIM35A0A1B0GVV1 85 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 DUSP28Q4G0W2 176 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 TMEM154Q6P9G4 183 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 NRDE2Q9H7Z3 1164 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 UBR2Q8IWV8 1755 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 MGAT4DA6NG13 374 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 SKIV2L2P42285 1042 aaKnown RBP9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 PABPC1LQ4VXU2 614 aaKnown RBP9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 PCID2Q5JVF3 399 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 WSCD1Q658N2 575 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 ARCQ7LC44 396 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 ACMSDQ8TDX5 336 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 THAP11Q96EK4 314 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 C2orf49Q9BVC5 232 aaPredicted RBP9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 SVILO95425 2214 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 HPCAL1P37235 193 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 BTG3Q14201 252 aaPredicted RBP9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 BHMTQ93088 406 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 RRAGCQ9HB90 399 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 RCOR3Q9P2K3 495 aaPredicted RBP9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 C15orf38-AP3S2A0A0A6YYH1 394 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 STAU1O95793 577 aaKnown RBP9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 MYL4P12829 197 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 AMPD1P23109 780 aa9.3□□□□□ -0.92
SPTBN1-207ENST00000615901 SMARCB1Q12824 385 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms