RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 CAMKK2Q96RR4 588 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 TUBG2Q9NRH3 451 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 SLC39A1Q9NY26 324 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 LEF1Q9UJU2 399 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-211ENST00000615798 CACNA1CQ13936 2221 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 FRMPD2Q68DX3 1309 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-211ENST00000615798 TFECO14948 347 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-211ENST00000615798 EYA4O95677 639 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 RAG1P15918 1043 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 GRK5P34947 590 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 ZNF234Q14588 700 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 PTPAQ15257 358 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 C4orf22Q6V702 233 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 CHPFQ8IZ52 775 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 HEXDCQ8WVB3 486 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 E2F7Q96AV8 911 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 EIF3LQ9Y262 564 aaKnown RBP9.45□□□□□ -0.9
COL12A1-211ENST00000615798 NFIAQ12857 509 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 GPR158Q5T848 1215 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 FAM228AQ86W67 206 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 WDR24Q96S15 920 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 LRRC4Q9HBW1 653 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 CLN6Q9NWW5 311 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 UBP1Q9NZI7 540 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 NAB2Q15742 525 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 SNAP47Q5SQN1 464 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 CDKAL1Q5VV42 579 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 GPALPP1Q8IXQ4 340 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 PHF12Q96QT6 1004 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 UBE2TQ9NPD8 197 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-211ENST00000615798 MTMR10Q9NXD2 777 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 CLIC5Q9NZA1 410 aa9.45□□□□□ -0.9
COL12A1-211ENST00000615798 PDPK1O15530 556 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 PIGNO95427 931 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 CYP27A1Q02318 531 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 SCN1BQ07699 218 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 ERFEQ4G0M1 354 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 PIH1D2Q8WWB5 315 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 ASB15Q8WXK1 588 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 RRNAD1Q96FB5 475 aaKnown RBP9.44□□□□□ -0.9
COL12A1-211ENST00000615798 C17orf75Q9HAS0 396 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 ASNSD1Q9NWL6 643 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 GLS2Q9UI32 602 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 ZNF318Q5VUA4 2279 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 METTL18O95568 372 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 PI16Q6UXB8 463 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 NSMFQ6X4W1 530 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 BRINP3Q76B58 766 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 ZNF557Q8N988 423 aaPredicted RBP9.44□□□□□ -0.9
COL12A1-211ENST00000615798 A0A0A6YYK5 440 aaPredicted RBP9.44□□□□□ -0.9
COL12A1-211ENST00000615798 LOC100653049A0A140TA62 436 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 HS6ST1O60243 411 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 ZNF682O95780 498 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 ZNF267Q14586 743 aaPredicted RBP9.44□□□□□ -0.9
COL12A1-211ENST00000615798 BATFQ16520 125 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 MSANTD2Q6P1R3 559 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 EFHBQ8N7U6 833 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 NEDD4LQ96PU5 975 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 GNG8Q9UK08 70 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 FEM1BQ9UK73 627 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 SSR3Q9UNL2 185 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 AP3M1Q9Y2T2 418 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 DBTP11182 482 aaKnown RBP9.44□□□□□ -0.9
COL12A1-211ENST00000615798 ITIH2P19823 946 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 MYO7AQ13402 2215 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 TKTP29401 623 aaKnown RBP9.44□□□□□ -0.9
COL12A1-211ENST00000615798 MRPS22P82650 360 aaKnown RBP9.44□□□□□ -0.9
COL12A1-211ENST00000615798 FAM220AQ7Z4H9 259 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 PRCCQ92733 491 aaPredicted RBP9.44□□□□□ -0.9
COL12A1-211ENST00000615798 RSPH9Q9H1X1 276 aaPredicted RBP9.44□□□□□ -0.9
COL12A1-211ENST00000615798 RRN3P2A6NIE6 340 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 PPEF2O14830 753 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 NDUFB5O43674 189 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 GATBO75879 557 aaKnown RBP9.44□□□□□ -0.9
COL12A1-211ENST00000615798 GYPCP04921 128 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 CPA3P15088 417 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 BIKQ13323 160 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 SLCO6A1Q86UG4 719 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 ERO1BQ86YB8 467 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 BTBD10Q9BSF8 475 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 ISCUQ9H1K1 167 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 MAU2Q9Y6X3 613 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 ATRNO75882 1429 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 PRKD3O94806 890 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 SNRPAP09012 282 aaKnown RBP9.44□□□□□ -0.9
COL12A1-211ENST00000615798 COX4I1P13073 169 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 RWDD4Q6NW29 188 aaKnown RBP9.44□□□□□ -0.9
COL12A1-211ENST00000615798 SFRP1Q8N474 314 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 SPIRE2Q8WWL2 714 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 RAB21Q9UL25 225 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 USP27XA6NNY8 438 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 SASH3O75995 380 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 HNF4AP41235 474 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 DYNLL1P63167 89 aaKnown RBP9.44□□□□□ -0.9
COL12A1-211ENST00000615798 CYP4F2P78329 520 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 CYP4F3Q08477 520 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 SEMA3AQ14563 771 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 TRAPPC11Q7Z392 1133 aa9.44□□□□□ -0.9
COL12A1-211ENST00000615798 VANGL1Q8TAA9 524 aaPredicted RBP9.44□□□□□ -0.9
COL12A1-211ENST00000615798 AIFM3Q96NN9 605 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms