RNA–Protein interactions for RNA: ENST00000613355.4

CBWD1-221, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-221ENST00000613355 C1orf74Q96LT6 269 aa12.71□□□□□ -0.37
CBWD1-221ENST00000613355 CCDC114Q96M63 670 aa12.71□□□□□ -0.37
CBWD1-221ENST00000613355 CFAP57Q96MR6 1250 aa12.71□□□□□ -0.37
CBWD1-221ENST00000613355 HAPLN3Q96S86 360 aa12.71□□□□□ -0.37
CBWD1-221ENST00000613355 RTKNQ9BST9 563 aa12.71□□□□□ -0.37
CBWD1-221ENST00000613355 FUCA2Q9BTY2 467 aa12.71□□□□□ -0.37
CBWD1-221ENST00000613355 MUC3BQ9H195 1237 aa12.71□□□□□ -0.37
CBWD1-221ENST00000613355 ARHGEF38Q9NXL2 777 aa12.71□□□□□ -0.37
CBWD1-221ENST00000613355 SUSD2Q9UGT4 822 aa12.71□□□□□ -0.37
CBWD1-221ENST00000613355 XPO7Q9UIA9 1087 aaKnown RBP12.71□□□□□ -0.37
CBWD1-221ENST00000613355 FARP1Q9Y4F1 1045 aaPredicted RBP12.71□□□□□ -0.37
CBWD1-221ENST00000613355 HS3ST4Q9Y661 456 aa12.71□□□□□ -0.37
CBWD1-221ENST00000613355 FAM170AA1A519 330 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 LRRC53A6NM62 1247 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 MEI4A8MW99 385 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 RHOCP08134 193 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 TPM1P09493 284 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 CHRM1P11229 460 aaPredicted RBP12.71□□□□□ -0.38
CBWD1-221ENST00000613355 UNGP13051 313 aaPredicted RBP12.71□□□□□ -0.38
CBWD1-221ENST00000613355 GPD1P21695 349 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 BCKDHBP21953 392 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 FLT3P36888 993 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 ATXN3P54252 364 aaPredicted RBP12.71□□□□□ -0.38
CBWD1-221ENST00000613355 GSCP56915 257 aaPredicted RBP12.71□□□□□ -0.38
CBWD1-221ENST00000613355 FANCCQ00597 558 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 KLHL30Q0D2K2 578 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 CAMK2GQ13555 558 aaPredicted RBP12.71□□□□□ -0.38
CBWD1-221ENST00000613355 RSPO4Q2I0M5 234 aaPredicted RBP12.71□□□□□ -0.38
CBWD1-221ENST00000613355 PLEKHG6Q3KR16 790 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 C6orf118Q5T5N4 469 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 TMEM215Q68D42 235 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 ZNF776Q68DI1 518 aaPredicted RBP12.71□□□□□ -0.38
CBWD1-221ENST00000613355 RNF43Q68DV7 783 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 ARMCX6Q7L4S7 300 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 STRADAQ7RTN6 431 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 DSG4Q86SJ6 1040 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 SYT12Q8IV01 421 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 GANCQ8TET4 914 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 RXFP2Q8WXD0 754 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 NT5C3BQ969T7 300 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 TRIM11Q96F44 468 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 VCPIP1Q96JH7 1222 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 PRMT1Q99873 361 aaKnown RBP12.71□□□□□ -0.38
CBWD1-221ENST00000613355 TMEM245Q9H330 911 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 TMEM59LQ9UK28 342 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 VPS28Q9UK41 221 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 HCN2Q9UL51 889 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 ERVW-1Q9UQF0 538 aa12.71□□□□□ -0.38
CBWD1-221ENST00000613355 BZW2Q9Y6E2 419 aaKnown RBP12.71□□□□□ -0.38
CBWD1-221ENST00000613355 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.71□□□□□ -0.38
CBWD1-221ENST00000613355 PTPRZ1P23471 2315 aaPredicted RBP12.7□□□□□ -0.38
CBWD1-221ENST00000613355 IGHV1OR15-9A0A0B4J2B8 117 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 EDDM13A0A1B0GTR0 161 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 TARSL2A2RTX5 802 aaKnown RBP12.7□□□□□ -0.38
CBWD1-221ENST00000613355 CBFA2T2O43439 604 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 SRGAP2O75044 1071 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 HLA-EP13747 358 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 CHRNB2P17787 502 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 ETFBP38117 255 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 PTPN9P43378 593 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 FOXK2Q01167 660 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 ZNF33AQ06730 810 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 ACCSLQ4AC99 568 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 TDRD12Q587J7 1177 aaKnown RBP12.7□□□□□ -0.38
CBWD1-221ENST00000613355 FIGNQ5HY92 759 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 ACAD10Q6JQN1 1059 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 ERMP1Q7Z2K6 904 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 DGLUCYQ7Z3D6 616 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 SETD3Q86TU7 594 aaPredicted RBP12.7□□□□□ -0.38
CBWD1-221ENST00000613355 FAM131BQ86XD5 332 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 EMC1Q8N766 993 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 WFDC5Q8TCV5 224 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 P2RY11Q96G91 374 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 C2orf49Q9BVC5 232 aaPredicted RBP12.7□□□□□ -0.38
CBWD1-221ENST00000613355 PARD6AQ9NPB6 346 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 ITM2CQ9NQX7 267 aa12.7□□□□□ -0.38
CBWD1-221ENST00000613355 CEP192Q8TEP8 1941 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 SIGLEC16A6NMB1 481 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 E9PAM4 449 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 ADCY5O95622 1261 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 CFIP05156 583 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 OR1E1P30953 314 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 NR1I3Q14994 352 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 CCDC6Q16204 474 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 PTPRNQ16849 979 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 DUOXA1Q1HG43 343 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 TSR1Q2NL82 804 aaKnown RBP12.69□□□□□ -0.38
CBWD1-221ENST00000613355 HNRNPA1L2Q32P51 320 aaKnown RBP12.69□□□□□ -0.38
CBWD1-221ENST00000613355 FSCBQ5H9T9 825 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 PLA2G2CQ5R387 149 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 DAB2IPQ5VWQ8 1189 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 PHLDB2Q86SQ0 1253 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 CIR1Q86X95 450 aaPredicted RBP12.69□□□□□ -0.38
CBWD1-221ENST00000613355 CACUL1Q86Y37 369 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 CADM4Q8NFZ8 388 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 HSPA12BQ96MM6 686 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 EDEM2Q9BV94 578 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 ZYG11BQ9C0D3 744 aa12.69□□□□□ -0.38
CBWD1-221ENST00000613355 MKRN2Q9H000 416 aaKnown RBP12.69□□□□□ -0.38
CBWD1-221ENST00000613355 PCED1AQ9H1Q7 454 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms