RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ERLEC1Q96DZ1 483 aa12.71□□□□□ -0.37
CBWD3-208ENST00000612050 C1orf74Q96LT6 269 aa12.71□□□□□ -0.37
CBWD3-208ENST00000612050 CCDC114Q96M63 670 aa12.71□□□□□ -0.37
CBWD3-208ENST00000612050 CFAP57Q96MR6 1250 aa12.71□□□□□ -0.37
CBWD3-208ENST00000612050 HAPLN3Q96S86 360 aa12.71□□□□□ -0.37
CBWD3-208ENST00000612050 RTKNQ9BST9 563 aa12.71□□□□□ -0.37
CBWD3-208ENST00000612050 FUCA2Q9BTY2 467 aa12.71□□□□□ -0.37
CBWD3-208ENST00000612050 MUC3BQ9H195 1237 aa12.71□□□□□ -0.37
CBWD3-208ENST00000612050 ARHGEF38Q9NXL2 777 aa12.71□□□□□ -0.37
CBWD3-208ENST00000612050 SUSD2Q9UGT4 822 aa12.71□□□□□ -0.37
CBWD3-208ENST00000612050 XPO7Q9UIA9 1087 aaKnown RBP12.71□□□□□ -0.37
CBWD3-208ENST00000612050 HS3ST4Q9Y661 456 aa12.71□□□□□ -0.37
CBWD3-208ENST00000612050 FAM170AA1A519 330 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 LRRC53A6NM62 1247 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 MEI4A8MW99 385 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 RHOCP08134 193 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 TPM1P09493 284 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 CHRM1P11229 460 aaPredicted RBP12.71□□□□□ -0.38
CBWD3-208ENST00000612050 UNGP13051 313 aaPredicted RBP12.71□□□□□ -0.38
CBWD3-208ENST00000612050 GPD1P21695 349 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 BCKDHBP21953 392 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 FLT3P36888 993 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 ATXN3P54252 364 aaPredicted RBP12.71□□□□□ -0.38
CBWD3-208ENST00000612050 GSCP56915 257 aaPredicted RBP12.71□□□□□ -0.38
CBWD3-208ENST00000612050 FANCCQ00597 558 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 KLHL30Q0D2K2 578 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 CAMK2GQ13555 558 aaPredicted RBP12.71□□□□□ -0.38
CBWD3-208ENST00000612050 RSPO4Q2I0M5 234 aaPredicted RBP12.71□□□□□ -0.38
CBWD3-208ENST00000612050 PLEKHG6Q3KR16 790 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 C6orf118Q5T5N4 469 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 TMEM215Q68D42 235 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 ZNF776Q68DI1 518 aaPredicted RBP12.71□□□□□ -0.38
CBWD3-208ENST00000612050 RNF43Q68DV7 783 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 ARMCX6Q7L4S7 300 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 STRADAQ7RTN6 431 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 DSG4Q86SJ6 1040 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 SYT12Q8IV01 421 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 GANCQ8TET4 914 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 RXFP2Q8WXD0 754 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 NT5C3BQ969T7 300 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 TRIM11Q96F44 468 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 VCPIP1Q96JH7 1222 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 PRMT1Q99873 361 aaKnown RBP12.71□□□□□ -0.38
CBWD3-208ENST00000612050 TMEM245Q9H330 911 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 TMEM59LQ9UK28 342 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 VPS28Q9UK41 221 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 HCN2Q9UL51 889 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 ERVW-1Q9UQF0 538 aa12.71□□□□□ -0.38
CBWD3-208ENST00000612050 BZW2Q9Y6E2 419 aaKnown RBP12.71□□□□□ -0.38
CBWD3-208ENST00000612050 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.71□□□□□ -0.38
CBWD3-208ENST00000612050 PTPRZ1P23471 2315 aaPredicted RBP12.7□□□□□ -0.38
CBWD3-208ENST00000612050 IGHV1OR15-9A0A0B4J2B8 117 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 EDDM13A0A1B0GTR0 161 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 TARSL2A2RTX5 802 aaKnown RBP12.7□□□□□ -0.38
CBWD3-208ENST00000612050 CBFA2T2O43439 604 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 SRGAP2O75044 1071 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 HLA-EP13747 358 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 CHRNB2P17787 502 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 ETFBP38117 255 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 PTPN9P43378 593 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 FOXK2Q01167 660 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 ZNF33AQ06730 810 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 ACCSLQ4AC99 568 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 TDRD12Q587J7 1177 aaKnown RBP12.7□□□□□ -0.38
CBWD3-208ENST00000612050 FIGNQ5HY92 759 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 ACAD10Q6JQN1 1059 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 ERMP1Q7Z2K6 904 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 DGLUCYQ7Z3D6 616 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 SETD3Q86TU7 594 aaPredicted RBP12.7□□□□□ -0.38
CBWD3-208ENST00000612050 FAM131BQ86XD5 332 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 EMC1Q8N766 993 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 WFDC5Q8TCV5 224 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 P2RY11Q96G91 374 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 C2orf49Q9BVC5 232 aaPredicted RBP12.7□□□□□ -0.38
CBWD3-208ENST00000612050 PARD6AQ9NPB6 346 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 ITM2CQ9NQX7 267 aa12.7□□□□□ -0.38
CBWD3-208ENST00000612050 CEP192Q8TEP8 1941 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 SIGLEC16A6NMB1 481 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 E9PAM4 449 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 ADCY5O95622 1261 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 CFIP05156 583 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 OR1E1P30953 314 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 NR1I3Q14994 352 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 CCDC6Q16204 474 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 PTPRNQ16849 979 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 DUOXA1Q1HG43 343 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 TSR1Q2NL82 804 aaKnown RBP12.69□□□□□ -0.38
CBWD3-208ENST00000612050 HNRNPA1L2Q32P51 320 aaKnown RBP12.69□□□□□ -0.38
CBWD3-208ENST00000612050 FSCBQ5H9T9 825 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 PLA2G2CQ5R387 149 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 DAB2IPQ5VWQ8 1189 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 PHLDB2Q86SQ0 1253 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 CIR1Q86X95 450 aaPredicted RBP12.69□□□□□ -0.38
CBWD3-208ENST00000612050 CACUL1Q86Y37 369 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 CADM4Q8NFZ8 388 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 HSPA12BQ96MM6 686 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 EDEM2Q9BV94 578 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 ZYG11BQ9C0D3 744 aa12.69□□□□□ -0.38
CBWD3-208ENST00000612050 MKRN2Q9H000 416 aaKnown RBP12.69□□□□□ -0.38
CBWD3-208ENST00000612050 PCED1AQ9H1Q7 454 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms