RNA–Protein interactions for RNA: ENST00000611841.1

EP400-208, Transcript of E1A binding protein p400, human

TSL 5

Gene EP400, Length 3,129 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EP400-208	ENST00000611841	EPHB1	P54762	984 aa		11.77	□□□□□ -0.52
EP400-208	ENST00000611841	STX3	Q13277	289 aa		11.77	□□□□□ -0.52
EP400-208	ENST00000611841	MSLN	Q13421	630 aa	Predicted RBP	11.77	□□□□□ -0.52
EP400-208	ENST00000611841	PDE1C	Q14123	709 aa	Predicted RBP	11.77	□□□□□ -0.52
EP400-208	ENST00000611841	FNDC8	Q8TC99	324 aa		11.77	□□□□□ -0.52
EP400-208	ENST00000611841	GDPD5	Q8WTR4	605 aa		11.77	□□□□□ -0.52
EP400-208	ENST00000611841	SLC35F5	Q8WV83	523 aa		11.77	□□□□□ -0.52
EP400-208	ENST00000611841	MRPL1	Q9BYD6	325 aa	Known RBP	11.77	□□□□□ -0.52
EP400-208	ENST00000611841	NXF3	Q9H4D5	531 aa	Known RBP	11.77	□□□□□ -0.52
EP400-208	ENST00000611841	KCNK13	Q9HB14	408 aa		11.77	□□□□□ -0.52
EP400-208	ENST00000611841	ADARB2	Q9NS39	739 aa	Known RBP	11.77	□□□□□ -0.52
EP400-208	ENST00000611841	UBAP1	Q9NZ09	502 aa		11.77	□□□□□ -0.52
EP400-208	ENST00000611841	LZTS1	Q9Y250	596 aa		11.77	□□□□□ -0.52
EP400-208	ENST00000611841	TMEM98	Q9Y2Y6	226 aa		11.77	□□□□□ -0.52
EP400-208	ENST00000611841	SSC5D	A1L4H1	1573 aa		11.77	□□□□□ -0.52
EP400-208	ENST00000611841	FER1L6	Q2WGJ9	1857 aa		11.77	□□□□□ -0.52
EP400-208	ENST00000611841	CCDC78	A2IDD5	438 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	KCNK1	O00180	336 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	DYNC1LI2	O43237	492 aa	Predicted RBP	11.77	□□□□□ -0.53
EP400-208	ENST00000611841	BUD23	O43709	281 aa	Known RBP	11.77	□□□□□ -0.53
EP400-208	ENST00000611841	SAT1	P21673	171 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	RPL10A	P62906	217 aa	Known RBP	11.77	□□□□□ -0.53
EP400-208	ENST00000611841	SLC18A2	Q05940	514 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	ITGA9	Q13797	1035 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	C16orf72	Q14CZ0	275 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	MYLK3	Q32MK0	819 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	FBXL19	Q6PCT2	694 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	PID1	Q7Z2X4	250 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.77	□□□□□ -0.53
EP400-208	ENST00000611841	GSDMB	Q8TAX9	411 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	ADAM32	Q8TC27	787 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.77	□□□□□ -0.53	2e-6	■■■□□ 18.8
EP400-208	ENST00000611841	SLC10A4	Q96EP9	437 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	CDCA5	Q96FF9	252 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	TBCB	Q99426	244 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	EBNA1BP2	Q99848	306 aa	Known RBP	11.77	□□□□□ -0.53
EP400-208	ENST00000611841	NDUFA13	Q9P0J0	144 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	TSC22D4	Q9Y3Q8	395 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	DNAJC25-GNG10	A0A024R161	153 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841		H3BSA7	217 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	SPTLC1	O15269	473 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	GABBR2	O75899	941 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	L1CAM	P32004	1257 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	STT3A	P46977	705 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	ACTR3	P61158	418 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	FOLH1	Q04609	750 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	INCA1	Q0VD86	236 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	STIL	Q15468	1287 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	FASTKD5	Q7L8L6	764 aa	Known RBP	11.77	□□□□□ -0.53
EP400-208	ENST00000611841	DEFB106A	Q8N104	65 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	COLGALT1	Q8NBJ5	622 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	AGR3	Q8TD06	166 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	DIS3L	Q8TF46	1054 aa	Known RBP	11.77	□□□□□ -0.53
EP400-208	ENST00000611841	GIPC3	Q8TF64	312 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	PGBD4	Q96DM1	585 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	CSPG4P5	Q96PW8	444 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	SELENON	Q9NZV5	590 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	ADAMTS6	Q9UKP5	1117 aa		11.77	□□□□□ -0.53
EP400-208	ENST00000611841	PIN4	Q9Y237	131 aa	Known RBP	11.77	□□□□□ -0.53
EP400-208	ENST00000611841	MYO18A	Q92614	2054 aa	Known RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	BCLAF3	A2AJT9	711 aa	Known RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	CLDN5	O00501	218 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	XPOT	O43592	962 aa	Known RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	LYPLA1	O75608	230 aa	Predicted RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	TRMU	O75648	421 aa	Known RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	RFPL1	O75677	317 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	RECQL4	O94761	1208 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	STAMBP	O95630	424 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	POR	P16435	677 aa	Predicted RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	MGAT1	P26572	445 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	SLC5A2	P31639	672 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	ABCG1	P45844	678 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	SULT1E1	P49888	294 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	TBL3	Q12788	808 aa	Known RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	TRMT5	Q32P41	509 aa	Known RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	DHDDS	Q86SQ9	333 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	PATL1	Q86TB9	770 aa	Known RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	EFCAB3	Q8N7B9	438 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	GPRC5A	Q8NFJ5	357 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	ZNF398	Q8TD17	642 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	TFB1M	Q8WVM0	346 aa	Known RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	HTR3C	Q8WXA8	447 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	PRPF18	Q99633	342 aa	Known RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	MED10	Q9BTT4	135 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	SUN2	Q9UH99	717 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	CAPN8	A6NHC0	703 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	SORBS2	O94875	1100 aa	Known RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	PITX1	P78337	314 aa	Predicted RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	MRPS5	P82675	430 aa	Known RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	OLIG2	Q13516	323 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	LPIN1	Q14693	890 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	PRAMEF19	Q5SWL8	479 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	NET1	Q7Z628	596 aa	Predicted RBP	11.76	□□□□□ -0.53
EP400-208	ENST00000611841	TMPRSS6	Q8IU80	811 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	POU5F2	Q8N7G0	328 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	DNAAF3	Q8N9W5	541 aa		11.76	□□□□□ -0.53
EP400-208	ENST00000611841	SIGLEC10	Q96LC7	697 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms