RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 CDH9Q9ULB4 789 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 NR2E3Q9Y5X4 410 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 SCN7AQ01118 1682 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 IQCF3P0C7M6 154 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 HADHAP40939 763 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 KPNB1Q14974 876 aaKnown RBP6.52□□□□□ -1.37
SNX13-213ENST00000611725 RAB6CQ53S08 254 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 SPANXN3Q5MJ09 141 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 SYPL2Q5VXT5 272 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 IGDCC3Q8IVU1 814 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 RFWD2Q8NHY2 731 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 C10orf82Q8WW14 230 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 ATP6V1E2Q96A05 226 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 RMDN1Q96DB5 314 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 MFSD3Q96ES6 412 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 TSPAN17Q96FV3 270 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 RAB6CQ9H0N0 254 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 MORF4L1Q9UBU8 362 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 TEX264Q9Y6I9 313 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 MYBPHLA2RUH7 354 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 SOCS7O14512 581 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 KLF11O14901 512 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 KPNA6O60684 536 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 SKAP2O75563 359 aaPredicted RBP6.52□□□□□ -1.37
SNX13-213ENST00000611725 ATP5BP06576 529 aaKnown RBP6.52□□□□□ -1.37
SNX13-213ENST00000611725 THRAP10827 490 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 BRCC3P46736 316 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 OR1G1P47890 313 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 AIF1P55008 147 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 WASHC5Q12768 1159 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 NBPF20Q3BBV1 942 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 MARC1Q5VT66 337 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 SPRYD7Q5W111 196 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 SEL1L3Q68CR1 1132 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 CDHR3Q6ZTQ4 885 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 DQX1Q8TE96 717 aaKnown RBP6.52□□□□□ -1.37
SNX13-213ENST00000611725 LENG1Q96BZ8 264 aaPredicted RBP6.52□□□□□ -1.37
SNX13-213ENST00000611725 IFT43Q96FT9 208 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 MTG1Q9BT17 334 aaPredicted RBP6.52□□□□□ -1.37
SNX13-213ENST00000611725 EBF2Q9HAK2 575 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 MRGBPQ9NV56 204 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 SYBUQ9NX95 663 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 ADA2Q9NZK5 511 aa6.52□□□□□ -1.37
SNX13-213ENST00000611725 FAM189A1O60320 539 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 SNAI1O95863 264 aaPredicted RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 HMBSP08397 361 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 CYP3A5P20815 502 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 CD151P48509 253 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 SLC1A6P48664 564 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 RENBPP51606 427 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 CSE1LP55060 971 aaKnown RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 CNGA3Q16281 694 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 LDLRAD1Q5T700 205 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 GRTP1Q5TC63 336 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 ZNF467Q7Z7K2 595 aaPredicted RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 TNS4Q8IZW8 715 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 ZNF567Q8N184 647 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 LPPQ93052 612 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 SERPINB11Q96P15 392 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 MRPL46Q9H2W6 279 aaKnown RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 SUN2Q9UH99 717 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 TNRC6CQ9HCJ0 1690 aaKnown RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 PRR5-ARHGAP8B1AHC4 643 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 HDAC3O15379 428 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 TADA2AO75478 443 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 KRT36O76013 467 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 CHEK2O96017 543 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 PRKCHP24723 683 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 PTDSS1P48651 473 aaKnown RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 DAOAP59103 153 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 ARHGAP8P85298 464 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 MAPRE2Q15555 327 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 PDCD2Q16342 344 aaPredicted RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 CCDC153Q494R4 210 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 TAPT1Q6NXT6 567 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 CAND1Q86VP6 1230 aaKnown RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 DEFB107AQ8IZN7 70 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 ELMO2Q96JJ3 720 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 ADAM2Q99965 735 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 FBXO5Q9UKT4 447 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 GOLGA8CPA6NN73 597 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 A8MUI8 341 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 GSC2O15499 205 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 PIGNO95427 931 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 PSMG1O95456 288 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 GFAPP14136 432 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 NDUFV1P49821 464 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 NUDT2P50583 147 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 TUBP50607 506 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 POLE2P56282 527 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 YWHAHQ04917 246 aaPredicted RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 SLC18A2Q05940 514 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 EFEMP1Q12805 493 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 ZNF792Q3KQV3 632 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 URGCPQ8TCY9 931 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 CADM1Q9BY67 442 aaKnown RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 NUF2Q9BZD4 464 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 MMADHCQ9H3L0 296 aaPredicted RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 GPAMQ9HCL2 828 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 SNX15Q9NRS6 342 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms