RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 LINC01599Q8WXQ3 324 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 PGLYRP2Q96PD5 576 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 LRRC37BQ96QE4 947 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 NAT9Q9BTE0 207 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 TSSK1BQ9BXA7 367 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 IL1RAPL1Q9NZN1 696 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 NUDT5Q9UKK9 219 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 RPS6KL1Q9Y6S9 549 aa13.96□□□□□ -0.17
NEK3-205ENST00000610828 TNFRSF10BO14763 440 aa13.96□□□□□ -0.18
NEK3-205ENST00000610828 INPPL1O15357 1258 aa13.96□□□□□ -0.18
NEK3-205ENST00000610828 MTSS1O43312 755 aa13.96□□□□□ -0.18
NEK3-205ENST00000610828 AP2A1O95782 977 aa13.96□□□□□ -0.18
NEK3-205ENST00000610828 IGLV3-25P01717 112 aa13.96□□□□□ -0.18
NEK3-205ENST00000610828 POLBP06746 335 aa13.96□□□□□ -0.18
NEK3-205ENST00000610828 CD68P34810 354 aaPredicted RBP13.96□□□□□ -0.18
NEK3-205ENST00000610828 CCDC15Q0P6D6 951 aa13.96□□□□□ -0.18
NEK3-205ENST00000610828 CYB5D1Q6P9G0 228 aa13.96□□□□□ -0.18
NEK3-205ENST00000610828 STKLD1Q8NE28 680 aa13.96□□□□□ -0.18
NEK3-205ENST00000610828 URGCPQ8TCY9 931 aa13.96□□□□□ -0.18
NEK3-205ENST00000610828 ERP27Q96DN0 273 aa13.96□□□□□ -0.18
NEK3-205ENST00000610828 MYLK2Q9H1R3 596 aa13.96□□□□□ -0.18
NEK3-205ENST00000610828 DCTN4Q9UJW0 460 aa13.96□□□□□ -0.18
NEK3-205ENST00000610828 CHKBQ9Y259 395 aa13.96□□□□□ -0.18
NEK3-205ENST00000610828 PLLPQ9Y342 182 aa13.96□□□□□ -0.18
NEK3-205ENST00000610828 TTC3P53804 2025 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 MOXD2PA6NHM9 499 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 NFKB1P19838 968 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 CCNFP41002 786 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 DSC1Q08554 894 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 NIPAL4Q0D2K0 466 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 TEX44Q53QW1 395 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 TRAF7Q6Q0C0 670 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 MARK2Q7KZI7 788 aaKnown RBP13.95□□□□□ -0.18
NEK3-205ENST00000610828 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.95□□□□□ -0.18
NEK3-205ENST00000610828 ARMC2Q8NEN0 867 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 CASP10Q92851 521 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 MECRQ9BV79 373 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 OSBPL2Q9H1P3 480 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 GBA3Q9H227 469 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 TBC1D13Q9NVG8 400 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 ARHGEF38Q9NXL2 777 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 DNAJB4Q9UDY4 337 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 TRHDEQ9UKU6 1024 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 MAGED2Q9UNF1 606 aaPredicted RBP13.95□□□□□ -0.18
NEK3-205ENST00000610828 ARHGAP42A6NI28 874 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 DFFAO00273 331 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 DCTN3O75935 186 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 JCHAINP01591 159 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 CNTFP26441 200 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 HOXD10P28358 340 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 CCR1P32246 355 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 EIF4EBP2Q13542 120 aaPredicted RBP13.95□□□□□ -0.18
NEK3-205ENST00000610828 SDHAF4Q5VUM1 108 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 ITPRIPL1Q6GPH6 555 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 BEND5Q7L4P6 421 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 FAM193BQ96PV7 902 aaPredicted RBP13.95□□□□□ -0.18
NEK3-205ENST00000610828 STARD7Q9NQZ5 370 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 UBP1Q9NZI7 540 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 ZFATQ9P243 1243 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 VANGL2Q9ULK5 521 aa13.95□□□□□ -0.18
NEK3-205ENST00000610828 COL4A4P53420 1690 aaPredicted RBP13.94□□□□□ -0.18
NEK3-205ENST00000610828 A0A1W2PQ45 241 aaPredicted RBP13.94□□□□□ -0.18
NEK3-205ENST00000610828 A0A1W2PQY0 241 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 PAGE1O75459 146 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 TRPA1O75762 1119 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 TOP3BO95985 862 aaKnown RBP13.94□□□□□ -0.18
NEK3-205ENST00000610828 ERVK-10P10266 1014 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 CYP2C18P33260 490 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 PLEKHG4Q58EX7 1191 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 BRMS1LQ5PSV4 323 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 PACS1Q6VY07 963 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 RASSF3Q86WH2 238 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 COLGALT2Q8IYK4 626 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 RFWD2Q8NHY2 731 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 KLHL29Q96CT2 875 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 VAT1Q99536 393 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 SMOC2Q9H3U7 446 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 BFARQ9NZS9 450 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 TXNDC16Q9P2K2 825 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 PSAT1Q9Y617 370 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 MRPL42Q9Y6G3 142 aaKnown RBP13.94□□□□□ -0.18
NEK3-205ENST00000610828 FRMPD3Q5JV73 1810 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 PATJQ8NI35 1801 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 A0A0G2JND7 137 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 A0A1W2PQH9 124 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 CFAP73A6NFT4 308 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 MOCS2O96007 188 aaPredicted RBP13.94□□□□□ -0.18
NEK3-205ENST00000610828 NLRP9Q7RTR0 991 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 SCD5Q86SK9 330 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 USP33Q8TEY7 942 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 CERS2Q96G23 380 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 TEKT5Q96M29 485 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 HAPLN3Q96S86 360 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 APOL2Q9BQE5 337 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 MLPHQ9BV36 600 aaPredicted RBP13.94□□□□□ -0.18
NEK3-205ENST00000610828 TRIM55Q9BYV6 548 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 LRRC40Q9H9A6 602 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 NMUR1Q9HB89 426 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 MKS1Q9NXB0 559 aa13.94□□□□□ -0.18
NEK3-205ENST00000610828 NEU3Q9UQ49 428 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms