RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 FAM193BQ96PV7 902 aaPredicted RBP12.25□□□□□ -0.45
USP6NL-206ENST00000609853 SRPK1Q96SB4 655 aaKnown RBP12.25□□□□□ -0.45
USP6NL-206ENST00000609853 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.25□□□□□ -0.45
USP6NL-206ENST00000609853 SMYD2Q9NRG4 433 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 TMEM161AQ9NX61 479 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 DONSONQ9NYP3 566 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 SLC17A7Q9P2U7 560 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 PLLPQ9Y342 182 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 KCNK1O00180 336 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 UBOX5O94941 541 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 ITGB1P05556 798 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 CSH1P0DML2 217 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 CSH2P0DML3 217 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 CCNCP24863 283 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 MGAT1P26572 445 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 SERPINB4P48594 390 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 MGAT5Q09328 741 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 ARHGEF6Q15052 776 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 SPRED3Q2MJR0 410 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 CLLU1OSQ5K130 101 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 ACBD5Q5T8D3 534 aaPredicted RBP12.25□□□□□ -0.45
USP6NL-206ENST00000609853 ARMC3Q5W041 872 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 KCTD11Q693B1 232 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 TRMT10BQ6PF06 316 aaKnown RBP12.25□□□□□ -0.45
USP6NL-206ENST00000609853 OTOAQ7RTW8 1153 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 LINC00523Q86TU6 105 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 PACS2Q86VP3 889 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 KLHDC8BQ8IXV7 354 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 FITM2Q8N6M3 262 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 NPWQ8N729 165 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 ATP2A3Q93084 1043 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 TEKT5Q96M29 485 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 SERPINB11Q96P15 392 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 LRRC37BQ96QE4 947 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 KLF6Q99612 283 aaPredicted RBP12.25□□□□□ -0.45
USP6NL-206ENST00000609853 SLCO1B3Q9NPD5 702 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 CASS4Q9NQ75 786 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 SCML2Q9UQR0 700 aa12.25□□□□□ -0.45
USP6NL-206ENST00000609853 SHROOM3Q8TF72 1996 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 A0A1W2PQ45 241 aaPredicted RBP12.24□□□□□ -0.45
USP6NL-206ENST00000609853 A0A1W2PQY0 241 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 C2CD2LO14523 706 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 BIRC5O15392 142 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 DDHD2O94830 711 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 IBSPP21815 317 aaPredicted RBP12.24□□□□□ -0.45
USP6NL-206ENST00000609853 SESN2P58004 480 aaPredicted RBP12.24□□□□□ -0.45
USP6NL-206ENST00000609853 CAP1Q01518 475 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 SMARCB1Q12824 385 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 FAM133BQ5BKY9 247 aaKnown RBP12.24□□□□□ -0.45
USP6NL-206ENST00000609853 ATG16L1Q676U5 607 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 KYAT3Q6YP21 454 aaKnown RBP12.24□□□□□ -0.45
USP6NL-206ENST00000609853 SCAMP5Q8TAC9 235 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 DPF3Q92784 378 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 TBC1D31Q96DN5 1066 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 C1orf74Q96LT6 269 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 FAM111AQ96PZ2 611 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 TMEM209Q96SK2 561 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 TSSK1BQ9BXA7 367 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 TRIM55Q9BYV6 548 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 TRPV6Q9H1D0 765 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 SLC40A1Q9NP59 571 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 STARD7Q9NQZ5 370 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 TXLNGQ9NUQ3 528 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 TBC1D13Q9NVG8 400 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 TXNDC16Q9P2K2 825 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 AAR2Q9Y312 384 aaKnown RBP12.24□□□□□ -0.45
USP6NL-206ENST00000609853 PLXNA3P51805 1871 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 MYO16Q9Y6X6 1858 aa12.24□□□□□ -0.45
USP6NL-206ENST00000609853 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.23□□□□□ -0.45
USP6NL-206ENST00000609853 OR6C75A6NL08 312 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 ARVCFO00192 962 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 ZBTB24O43167 697 aaPredicted RBP12.23□□□□□ -0.45
USP6NL-206ENST00000609853 CACNG3O60359 315 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 TADA2AO75478 443 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 USP1O94782 785 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 SRGAP2BP0DMP2 458 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 NEFHP12036 1026 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 SELPP16109 830 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 OR1G1P47890 313 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 PRMT2P55345 433 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 MTA1Q13330 715 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 BFSP2Q13515 415 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 MBTPS1Q14703 1052 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 SLC39A12Q504Y0 691 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 GRTP1Q5TC63 336 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 MANEALQ5VSG8 457 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 NAPEPLDQ6IQ20 393 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 MSANTD2Q6P1R3 559 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 TMEM135Q86UB9 458 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 ZNF280BQ86YH2 543 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 NUP93Q8N1F7 819 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 SLAIN1Q8ND83 568 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 C10orf82Q8WW14 230 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 SPOCK2Q92563 424 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 CAPNS2Q96L46 248 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 RMDN2Q96LZ7 410 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 CPNE1Q99829 537 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 OXCT2Q9BYC2 517 aaPredicted RBP12.23□□□□□ -0.45
USP6NL-206ENST00000609853 IL22Q9GZX6 179 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 GPBP1L1Q9HC44 474 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms