RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 LYVE1Q9Y5Y7 322 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 CHURC1-FNTBB4DL54 471 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 EPN2O95208 641 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 AMPD1P23109 780 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 EPHB3P54753 998 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 ITGA1P56199 1179 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 ARF5P84085 180 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 XRCC4Q13426 336 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 IKBIPQ70UQ0 350 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 SNX32Q86XE0 403 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 PROX1Q92786 737 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 FMO4P31512 558 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 CCR1P32246 355 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 TAF13Q15543 124 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 IL27RAQ6UWB1 636 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 DAGLBQ8NCG7 672 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 OR56A4Q8NGH8 313 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 MMADHCQ9H3L0 296 aaPredicted RBP13.32□□□□□ -0.28
USP6NL-205ENST00000609104 HACL1Q9UJ83 578 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 MYH8P13535 1937 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 MYO3AQ8NEV4 1616 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 BST2Q10589 180 aaKnown RBP13.32□□□□□ -0.28
USP6NL-205ENST00000609104 ZNF484Q5JVG2 852 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 ZNF276Q8N554 614 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 BTBD3Q9Y2F9 522 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 TNFRSF21O75509 655 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 DNAJB2P25686 324 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 NDST1P52848 882 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 MCL1Q07820 350 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 GTF3C2Q8WUA4 911 aaPredicted RBP13.32□□□□□ -0.28
USP6NL-205ENST00000609104 ERLEC1Q96DZ1 483 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 ZNF184Q99676 751 aaPredicted RBP13.32□□□□□ -0.28
USP6NL-205ENST00000609104 NRDE2Q9H7Z3 1164 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 VPS45Q9NRW7 570 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 C15orf41Q9Y2V0 281 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 MRASO14807 208 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 SOX10P56693 466 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 ZNF844Q08AG5 666 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 PMF1Q6P1K2 205 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 ADAM32Q8TC27 787 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 NMRAL1Q9HBL8 299 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 RABGEF1Q9UJ41 708 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 NEK3P51956 506 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 ACOX1Q15067 660 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 PROSER1Q86XN7 944 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 FBXO16Q8IX29 292 aaPredicted RBP13.31□□□□□ -0.28
USP6NL-205ENST00000609104 ZKSCAN4Q969J2 545 aaPredicted RBP13.31□□□□□ -0.28
USP6NL-205ENST00000609104 GLT1D1Q96MS3 346 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 REEP1Q9H902 201 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 AGO4Q9HCK5 861 aaKnown RBP13.31□□□□□ -0.28
USP6NL-205ENST00000609104 TNS3Q68CZ2 1445 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 BTN3A1O00481 513 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 ZNF286BP0CG31 522 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 CXCL8P10145 99 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 CYP4F2P78329 520 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 CYP4F3Q08477 520 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 FAAP100Q0VG06 881 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 UTS2BQ765I0 119 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 SCUBE3Q8IX30 993 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 EHD3Q9NZN3 535 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 TRPM5Q9NZQ8 1165 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 TIMM13Q9Y5L4 95 aaPredicted RBP13.31□□□□□ -0.28
USP6NL-205ENST00000609104 ANXA6P08133 673 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 PRR5LQ6MZQ0 368 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 GPSM1Q86YR5 675 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 FBXO30Q8TB52 745 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 TBL1YQ9BQ87 522 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 ATXN3LQ9H3M9 355 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 DNPEPQ9ULA0 475 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 KHDRBS3O75525 346 aaKnown RBP13.31□□□□□ -0.28
USP6NL-205ENST00000609104 FBXO21O94952 628 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 PTPN11Q06124 597 aaPredicted RBP13.31□□□□□ -0.28
USP6NL-205ENST00000609104 MYBPC2Q14324 1141 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.31□□□□□ -0.28
USP6NL-205ENST00000609104 KBTBD2Q8IY47 623 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 S100A13Q99584 98 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 ENOPH1Q9UHY7 261 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 ARIH1Q9Y4X5 557 aaPredicted RBP13.31□□□□□ -0.28
USP6NL-205ENST00000609104 SMIM22K7EJ46 135 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 PGAM1P18669 254 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 TOMM20Q15388 145 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 KRT74Q7RTS7 529 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 BPIFB6Q8NFQ5 453 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 TEKT5Q96M29 485 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 MBD2Q9UBB5 411 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 TSPAN16Q9UKR8 245 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 BTN3A3O00478 584 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 LAMTOR4Q0VGL1 99 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 FRG1Q14331 258 aaKnown RBP13.31□□□□□ -0.28
USP6NL-205ENST00000609104 ACAP1Q15027 740 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 SLC41A1Q8IVJ1 513 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 HDAC7Q8WUI4 952 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 PXMP2Q9NR77 195 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 ZNF222Q9UK12 451 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 A0A087WXM4 84 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 SERPINF2P08697 491 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 ZIK1Q3SY52 487 aaPredicted RBP13.31□□□□□ -0.28
USP6NL-205ENST00000609104 TMC2Q8TDI7 906 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 MAML3Q96JK9 1138 aa13.31□□□□□ -0.28
USP6NL-205ENST00000609104 PLA2R1Q13018 1463 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms