RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 LVRNQ6Q4G3 990 aa4.91□□□□□ -1.62
HDDC2-207ENST00000608532 C9orf47Q6ZRZ4 202 aa4.91□□□□□ -1.62
HDDC2-207ENST00000608532 ATG16L2Q8NAA4 619 aa4.91□□□□□ -1.62
HDDC2-207ENST00000608532 OR1N1Q8NGS0 311 aa4.91□□□□□ -1.62
HDDC2-207ENST00000608532 WDR83Q9BRX9 315 aaKnown RBP4.91□□□□□ -1.62
HDDC2-207ENST00000608532 LRFN1Q9P244 771 aa4.91□□□□□ -1.62
HDDC2-207ENST00000608532 COPG1Q9Y678 874 aaKnown RBP4.91□□□□□ -1.62
HDDC2-207ENST00000608532 IGKV2D-30A0A075B6S6 120 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 FAM90A18PA6NE21 464 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 FAM90A16PA6NEW6 464 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 FAM90A9PA6NNJ1 464 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 KRTAP29-1A8MX34 341 aaPredicted RBP4.9□□□□□ -1.63
HDDC2-207ENST00000608532 FAM90A5PA8MXJ8 464 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 ATG13O75143 517 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 SKAP2O75563 359 aaPredicted RBP4.9□□□□□ -1.63
HDDC2-207ENST00000608532 LARGE1O95461 756 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 FAM90A15PP0C7V4 464 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 FAM90A14PP0C7W9 464 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 IGFBP2P18065 325 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 CDKN2AP42771 156 aaKnown RBP4.9□□□□□ -1.63
HDDC2-207ENST00000608532 P2RX3P56373 397 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 HDAC1Q13547 482 aaPredicted RBP4.9□□□□□ -1.63
HDDC2-207ENST00000608532 PTK2BQ14289 1009 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 RPS6KA2Q15349 733 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 ODF3L2Q3SX64 289 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 TTC39AQ5SRH9 613 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 C1orf228Q6PIY5 440 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 MDGA2Q7Z553 956 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 ATP2A3Q93084 1043 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 RTKNQ9BST9 563 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 WDR12Q9GZL7 423 aaKnown RBP4.9□□□□□ -1.63
HDDC2-207ENST00000608532 LIN7CQ9NUP9 197 aaKnown RBP4.9□□□□□ -1.63
HDDC2-207ENST00000608532 PCDHA10Q9Y5I2 948 aa4.9□□□□□ -1.63
HDDC2-207ENST00000608532 CYP3A7-CYP3A51PA0A087WV96 503 aa4.89□□□□□ -1.63
HDDC2-207ENST00000608532 FOXO6A8MYZ6 492 aa4.89□□□□□ -1.63
HDDC2-207ENST00000608532 ACTL6BO94805 426 aa4.89□□□□□ -1.63
HDDC2-207ENST00000608532 ITGA2BP08514 1039 aa4.89□□□□□ -1.63
HDDC2-207ENST00000608532 CYP3A7P24462 503 aa4.89□□□□□ -1.63
HDDC2-207ENST00000608532 RCAN1P53805 252 aa4.89□□□□□ -1.63
HDDC2-207ENST00000608532 PUM3Q15397 648 aaKnown RBP4.89□□□□□ -1.63
HDDC2-207ENST00000608532 ZACNQ401N2 412 aa4.89□□□□□ -1.63
HDDC2-207ENST00000608532 TTLL5Q6EMB2 1281 aa4.89□□□□□ -1.63
HDDC2-207ENST00000608532 KLHL17Q6TDP4 642 aa4.89□□□□□ -1.63
HDDC2-207ENST00000608532 TOGARAM2Q6ZUX3 1019 aa4.89□□□□□ -1.63
HDDC2-207ENST00000608532 CCDC117Q8IWD4 279 aaPredicted RBP4.89□□□□□ -1.63
HDDC2-207ENST00000608532 PELI3Q8N2H9 469 aa4.89□□□□□ -1.63
HDDC2-207ENST00000608532 EXD3Q8N9H8 876 aa4.89□□□□□ -1.63
HDDC2-207ENST00000608532 LPAR1Q92633 364 aa4.89□□□□□ -1.63
HDDC2-207ENST00000608532 CLMNQ96JQ2 1002 aa4.89□□□□□ -1.63
HDDC2-207ENST00000608532 CAMK1GQ96NX5 476 aa4.89□□□□□ -1.63
HDDC2-207ENST00000608532 CRB3Q9BUF7 120 aa4.89□□□□□ -1.63
HDDC2-207ENST00000608532 ELAC1Q9H777 363 aaKnown RBP4.89□□□□□ -1.63
HDDC2-207ENST00000608532 MRPL44Q9H9J2 332 aaKnown RBP4.89□□□□□ -1.63
HDDC2-207ENST00000608532 ARL15Q9NXU5 204 aa4.89□□□□□ -1.63
HDDC2-207ENST00000608532 EFCAB8A8MWE9 144 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 MCIDASD6RGH6 385 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 NEURL1O76050 574 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 TBXAS1P24557 533 aaPredicted RBP4.88□□□□□ -1.63
HDDC2-207ENST00000608532 PDIA3P30101 505 aaKnown RBP4.88□□□□□ -1.63
HDDC2-207ENST00000608532 CCKARP32238 428 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 POLD2P49005 469 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 BRD3Q15059 726 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 ALG10Q5BKT4 473 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 ALG10BQ5I7T1 473 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 ENTPD8Q5MY95 495 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 RUSC1-AS1Q66K80 236 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 ERAP2Q6P179 960 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 KIAA1324Q6UXG2 1013 aaKnown RBP4.88□□□□□ -1.63
HDDC2-207ENST00000608532 NOL8Q76FK4 1167 aaKnown RBP4.88□□□□□ -1.63
HDDC2-207ENST00000608532 ANKS1BQ7Z6G8 1248 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 TMEM200AQ86VY9 491 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 CCDC25Q86WR0 208 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 VPS37AQ8NEZ2 397 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 C3orf49Q96BT1 292 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 KATNAL1Q9BW62 490 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 TXNRD2Q9NNW7 524 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 SPAG4Q9NPE6 437 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 HERC5Q9UII4 1024 aaKnown RBP4.88□□□□□ -1.63
HDDC2-207ENST00000608532 SLC25A13Q9UJS0 675 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 DAPP1Q9UN19 280 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 DAAM1Q9Y4D1 1078 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 TTC3P53804 2025 aa4.88□□□□□ -1.63
HDDC2-207ENST00000608532 ABHD14A-ACY1A0A1B0GW23 586 aa4.87□□□□□ -1.63
HDDC2-207ENST00000608532 MBD3L5A6NJ08 208 aaPredicted RBP4.87□□□□□ -1.63
HDDC2-207ENST00000608532 F5H423 210 aaPredicted RBP4.87□□□□□ -1.63
HDDC2-207ENST00000608532 CHRNA5P30532 468 aa4.87□□□□□ -1.63
HDDC2-207ENST00000608532 PCP4P48539 62 aa4.87□□□□□ -1.63
HDDC2-207ENST00000608532 THBS3P49746 956 aa4.87□□□□□ -1.63
HDDC2-207ENST00000608532 ADPRHP54922 357 aa4.87□□□□□ -1.63
HDDC2-207ENST00000608532 NANOS2P60321 138 aaKnown RBP4.87□□□□□ -1.63
HDDC2-207ENST00000608532 ICA1Q05084 483 aa4.87□□□□□ -1.63
HDDC2-207ENST00000608532 GALNT1Q10472 559 aaPredicted RBP4.87□□□□□ -1.63
HDDC2-207ENST00000608532 SEMA3AQ14563 771 aa4.87□□□□□ -1.63
HDDC2-207ENST00000608532 GPR162Q16538 588 aa4.87□□□□□ -1.63
HDDC2-207ENST00000608532 SULT6B1Q6IMI4 303 aa4.87□□□□□ -1.63
HDDC2-207ENST00000608532 NFRKBQ6P4R8 1299 aa4.87□□□□□ -1.63
HDDC2-207ENST00000608532 SYNE3Q6ZMZ3 975 aa4.87□□□□□ -1.63
HDDC2-207ENST00000608532 RTL10Q7L3V2 364 aa4.87□□□□□ -1.63
HDDC2-207ENST00000608532 RRAGAQ7L523 313 aa4.87□□□□□ -1.63
HDDC2-207ENST00000608532 RAB11FIP2Q7L804 512 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms